RNA–Protein interactions for RNA: ENST00000483972.1

LTB-213, Transcript of lymphotoxin beta, humanhuman

TSL 5

Gene LTB, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTB-213ENST00000483972 NMRK2Q9NPI5 230 aa28.26■■■□□ 2.11
LTB-213ENST00000483972 KIF20BQ96Q89 1820 aa28.26■■■□□ 2.11
LTB-213ENST00000483972 MAP2P11137 1827 aaKnown RBP28.25■■■□□ 2.11
LTB-213ENST00000483972 CLSPNQ9HAW4 1339 aa28.24■■■□□ 2.11
LTB-213ENST00000483972 FCHSD2O94868 740 aa28.24■■■□□ 2.11
LTB-213ENST00000483972 TRAPPC3LQ5T215 181 aa28.24■■■□□ 2.11
LTB-213ENST00000483972 RTCBQ9Y3I0 505 aaKnown RBP28.24■■■□□ 2.11
LTB-213ENST00000483972 N4BP2Q86UW6 1770 aaPredicted RBP28.24■■■□□ 2.11
LTB-213ENST00000483972 DNAJC5GQ8N7S2 189 aa28.23■■■□□ 2.11
LTB-213ENST00000483972 CCDC87Q9NVE4 849 aa28.23■■■□□ 2.11
LTB-213ENST00000483972 NLGN1Q8N2Q7 840 aa28.22■■■□□ 2.11
LTB-213ENST00000483972 IFNL2Q8IZJ0 200 aa28.21■■■□□ 2.11
LTB-213ENST00000483972 DPEP1P16444 411 aa28.2■■■□□ 2.1
LTB-213ENST00000483972 RBM42Q9BTD8 480 aaKnown RBP28.19■■■□□ 2.1
LTB-213ENST00000483972 ATG3Q9NT62 314 aa28.19■■■□□ 2.1
LTB-213ENST00000483972 PHKG2P15735 406 aa28.18■■■□□ 2.1
LTB-213ENST00000483972 PARP3Q9Y6F1 533 aa28.18■■■□□ 2.1
LTB-213ENST00000483972 KIF13BQ9NQT8 1826 aa28.18■■■□□ 2.1
LTB-213ENST00000483972 C10orf71Q711Q0 1435 aa28.18■■■□□ 2.1
LTB-213ENST00000483972 C9orf131Q5VYM1 1079 aa28.17■■■□□ 2.1
LTB-213ENST00000483972 RBM46Q8TBY0 533 aaKnown RBP28.17■■■□□ 2.1
LTB-213ENST00000483972 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
LTB-213ENST00000483972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.17■■■□□ 2.1
LTB-213ENST00000483972 RFC4P35249 363 aa28.16■■■□□ 2.1
LTB-213ENST00000483972 HTRA3P83110 453 aa28.16■■■□□ 2.1
LTB-213ENST00000483972 CDCA8Q53HL2 280 aa28.16■■■□□ 2.1
LTB-213ENST00000483972 EYA1Q99502 592 aa28.16■■■□□ 2.1
LTB-213ENST00000483972 WDR90Q96KV7 1748 aa28.15■■■□□ 2.1
LTB-213ENST00000483972 KIAA1551Q9HCM1 1747 aa28.15■■■□□ 2.1
LTB-213ENST00000483972 CAPN15O75808 1086 aa28.14■■■□□ 2.1
LTB-213ENST00000483972 ARHGEF1Q92888 912 aaKnown RBP28.14■■■□□ 2.1
LTB-213ENST00000483972 NCAPD2Q15021 1401 aa28.14■■■□□ 2.1
LTB-213ENST00000483972 PLEKHG2Q9H7P9 1386 aa28.13■■■□□ 2.09
LTB-213ENST00000483972 KLRG1Q96E93 195 aa28.13■■■□□ 2.09
LTB-213ENST00000483972 ADRA2BP18089 450 aa28.12■■■□□ 2.09
LTB-213ENST00000483972 WASHC2AQ641Q2 1341 aa28.12■■■□□ 2.09
LTB-213ENST00000483972 GYS1P13807 737 aa28.11■■■□□ 2.09
LTB-213ENST00000483972 C4AP0C0L4 1744 aa28.11■■■□□ 2.09
LTB-213ENST00000483972 KDM2BQ8NHM5 1336 aa28.11■■■□□ 2.09
LTB-213ENST00000483972 COL13A1Q5TAT6 717 aaPredicted RBP28.1■■■□□ 2.09
LTB-213ENST00000483972 PIM2Q9P1W9 311 aa28.1■■■□□ 2.09
LTB-213ENST00000483972 FSTL1Q12841 308 aa28.09■■■□□ 2.09
LTB-213ENST00000483972 CARD14Q9BXL6 1004 aa28.09■■■□□ 2.09
LTB-213ENST00000483972 KDRP35968 1356 aa28.09■■■□□ 2.09
LTB-213ENST00000483972 RC3H1Q5TC82 1133 aaKnown RBP28.08■■■□□ 2.09
LTB-213ENST00000483972 RNF181Q9P0P0 153 aa28.08■■■□□ 2.09
LTB-213ENST00000483972 KCPQ6ZWJ8 1503 aa28.08■■■□□ 2.08
LTB-213ENST00000483972 RPS6KA4O75676 772 aa28.07■■■□□ 2.08
LTB-213ENST00000483972 DALRD3Q5D0E6 543 aaKnown RBP28.07■■■□□ 2.08
LTB-213ENST00000483972 SLC4A9Q96Q91 983 aa28.07■■■□□ 2.08
LTB-213ENST00000483972 RRAGCQ9HB90 399 aa28.06■■■□□ 2.08
LTB-213ENST00000483972 CNTNAP4Q9C0A0 1308 aa28.06■■■□□ 2.08
LTB-213ENST00000483972 ERVV-2B6SEH9 535 aa28.04■■■□□ 2.08
LTB-213ENST00000483972 HSP90AB1P08238 724 aaKnown RBP28.04■■■□□ 2.08
LTB-213ENST00000483972 TNS4Q8IZW8 715 aa28.04■■■□□ 2.08
LTB-213ENST00000483972 TIMELESSQ9UNS1 1208 aa28.04■■■□□ 2.08
LTB-213ENST00000483972 BRCA1P38398 1863 aaKnown RBP28.04■■■□□ 2.08
LTB-213ENST00000483972 KCNA3P22001 575 aa28.03■■■□□ 2.08
LTB-213ENST00000483972 JMYQ8N9B5 988 aa28.03■■■□□ 2.08
LTB-213ENST00000483972 ARFGEF1Q9Y6D6 1849 aa28.02■■■□□ 2.08
LTB-213ENST00000483972 ANKRD26Q9UPS8 1709 aa28.02■■■□□ 2.08
LTB-213ENST00000483972 TNNT2P45379 298 aaPredicted RBP28.02■■■□□ 2.08
LTB-213ENST00000483972 CABP4P57796 275 aa28.02■■■□□ 2.08
LTB-213ENST00000483972 DCAF5Q96JK2 942 aa28.02■■■□□ 2.08
LTB-213ENST00000483972 EIF4A2Q14240 407 aaKnown RBP28.01■■■□□ 2.07
LTB-213ENST00000483972 POLKQ9UBT6 870 aa28.01■■■□□ 2.07
LTB-213ENST00000483972 PTCD1O75127 700 aaKnown RBP28■■■□□ 2.07
LTB-213ENST00000483972 SRP68Q9UHB9 627 aaKnown RBP28■■■□□ 2.07
LTB-213ENST00000483972 COL5A3P25940 1745 aaPredicted RBP27.99■■■□□ 2.07
LTB-213ENST00000483972 SMC1BQ8NDV3 1235 aa27.99■■■□□ 2.07
LTB-213ENST00000483972 CHRNA5P30532 468 aa27.98■■■□□ 2.07
LTB-213ENST00000483972 PLEKHO1Q53GL0 409 aaPredicted RBP27.98■■■□□ 2.07
LTB-213ENST00000483972 ZNF530Q6P9A1 599 aaPredicted RBP27.98■■■□□ 2.07
LTB-213ENST00000483972 ZNF831Q5JPB2 1677 aa27.97■■■□□ 2.07
LTB-213ENST00000483972 FKBP8Q14318 412 aa27.97■■■□□ 2.07
LTB-213ENST00000483972 CRKLP46109 303 aaKnown RBP27.96■■■□□ 2.07
LTB-213ENST00000483972 DDR1Q08345 913 aa27.95■■■□□ 2.06
LTB-213ENST00000483972 POLR3GLQ9BT43 218 aa27.95■■■□□ 2.06
LTB-213ENST00000483972 USP42Q9H9J4 1324 aaKnown RBP27.94■■■□□ 2.06
LTB-213ENST00000483972 TNRC6CQ9HCJ0 1690 aaKnown RBP27.94■■■□□ 2.06
LTB-213ENST00000483972 MYH14Q7Z406 1995 aaKnown RBP27.93■■■□□ 2.06
LTB-213ENST00000483972 MTHFSP49914 203 aa27.93■■■□□ 2.06
LTB-213ENST00000483972 C1orf141Q5JVX7 400 aa27.93■■■□□ 2.06
LTB-213ENST00000483972 RASSF7Q02833 373 aa27.91■■■□□ 2.06
LTB-213ENST00000483972 AMOTQ4VCS5 1084 aa27.91■■■□□ 2.06
LTB-213ENST00000483972 KDM6AO15550 1401 aaPredicted RBP27.91■■■□□ 2.06
LTB-213ENST00000483972 ZPR1O75312 459 aa27.9■■■□□ 2.06
LTB-213ENST00000483972 PRELPP51888 382 aa27.9■■■□□ 2.06
LTB-213ENST00000483972 POLRMTO00411 1230 aaKnown RBP27.88■■■□□ 2.05
LTB-213ENST00000483972 NFATC2IPQ8NCF5 419 aa27.88■■■□□ 2.05
LTB-213ENST00000483972 HSPA1AP0DMV8 641 aaKnown RBP27.87■■■□□ 2.05
LTB-213ENST00000483972 HSPA1BP0DMV9 641 aaKnown RBP27.87■■■□□ 2.05
LTB-213ENST00000483972 SBF1O95248 1867 aa27.87■■■□□ 2.05
LTB-213ENST00000483972 VEGFAP15692 232 aaPredicted RBP27.86■■■□□ 2.05
LTB-213ENST00000483972 ZC3H4Q9UPT8 1303 aaKnown RBP27.86■■■□□ 2.05
LTB-213ENST00000483972 PCNTO95613 3336 aa27.85■■■□□ 2.05
LTB-213ENST00000483972 USPL1Q5W0Q7 1092 aa27.85■■■□□ 2.05
LTB-213ENST00000483972 LMNB1P20700 586 aa27.84■■■□□ 2.05
LTB-213ENST00000483972 TM4SF1P30408 202 aa27.83■■■□□ 2.05
LTB-213ENST00000483972 GLTPD2A6NH11 291 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms