RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 F11P03951 625 aa7.39□□□□□ -1.23
PTCD3-214ENST00000483925 BCRP11274 1271 aa7.39□□□□□ -1.23
PTCD3-214ENST00000483925 GPAT2Q6NUI2 795 aa7.39□□□□□ -1.23
PTCD3-214ENST00000483925 WASLO00401 505 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-214ENST00000483925 MX2P20592 715 aa7.38□□□□□ -1.23
PTCD3-214ENST00000483925 NEDD1Q8NHV4 660 aa7.38□□□□□ -1.23
PTCD3-214ENST00000483925 CNKSR1Q969H4 720 aa7.38□□□□□ -1.23
PTCD3-214ENST00000483925 ESYT1Q9BSJ8 1104 aa7.38□□□□□ -1.23
PTCD3-214ENST00000483925 NUCKS1Q9H1E3 243 aaKnown RBP7.38□□□□□ -1.23
PTCD3-214ENST00000483925 SNRKQ9NRH2 765 aa7.38□□□□□ -1.23
PTCD3-214ENST00000483925 RAB6BQ9NRW1 208 aa7.38□□□□□ -1.23
PTCD3-214ENST00000483925 CEP126Q9P2H0 1117 aa7.38□□□□□ -1.23
PTCD3-214ENST00000483925 NSFL1CQ9UNZ2 370 aaKnown RBP7.38□□□□□ -1.23
PTCD3-214ENST00000483925 PHF20L1A8MW92 1017 aa7.37□□□□□ -1.23
PTCD3-214ENST00000483925 MYCP01106 439 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-214ENST00000483925 CENPCQ03188 943 aa7.37□□□□□ -1.23
PTCD3-214ENST00000483925 BEND7Q8N7W2 519 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-214ENST00000483925 ACDQ96AP0 544 aa7.37□□□□□ -1.23
PTCD3-214ENST00000483925 TRAIPQ9BWF2 469 aa7.37□□□□□ -1.23
PTCD3-214ENST00000483925 CNTNAP5Q8WYK1 1306 aa7.36□□□□□ -1.23
PTCD3-214ENST00000483925 LRRC4BQ9NT99 713 aa7.36□□□□□ -1.23
PTCD3-214ENST00000483925 IL2RAP01589 272 aa7.35□□□□□ -1.23
PTCD3-214ENST00000483925 PODNQ7Z5L7 613 aa7.35□□□□□ -1.23
PTCD3-214ENST00000483925 CCDC85AQ96PX6 553 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-214ENST00000483925 ZSCAN10Q96SZ4 725 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-214ENST00000483925 CDCA7Q9BWT1 371 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-214ENST00000483925 CFHR5Q9BXR6 569 aa7.35□□□□□ -1.23
PTCD3-214ENST00000483925 GTF2E1P29083 439 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-214ENST00000483925 XAGE2Q96GT9 111 aa7.34□□□□□ -1.23
PTCD3-214ENST00000483925 A0A1B0GTH6 734 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 PHKA2P46019 1235 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 MAP2K3P46734 347 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 GNASQ5JWF2 1037 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 TMEM214Q6NUQ4 689 aaKnown RBP7.33□□□□□ -1.24
PTCD3-214ENST00000483925 GPAMQ9HCL2 828 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 PRM3Q9NNZ6 103 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 PHF24Q9UPV7 400 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 HRH3Q9Y5N1 445 aa7.33□□□□□ -1.24
PTCD3-214ENST00000483925 OIP5O43482 229 aa7.32□□□□□ -1.24
PTCD3-214ENST00000483925 RAD21O60216 631 aa7.32□□□□□ -1.24
PTCD3-214ENST00000483925 EIF4G2P78344 907 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTCD3-214ENST00000483925 USP4Q13107 963 aa7.32□□□□□ -1.24
PTCD3-214ENST00000483925 ESCO1Q5FWF5 840 aa7.32□□□□□ -1.24
PTCD3-214ENST00000483925 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
PTCD3-214ENST00000483925 OXCT2Q9BYC2 517 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-214ENST00000483925 LBRQ14739 615 aaKnown RBP7.31□□□□□ -1.24
PTCD3-214ENST00000483925 CLUAP1Q96AJ1 413 aa7.31□□□□□ -1.24
PTCD3-214ENST00000483925 FHDC1Q9C0D6 1143 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-214ENST00000483925 SERPINA10Q9UK55 444 aa7.31□□□□□ -1.24
PTCD3-214ENST00000483925 THBS1P07996 1170 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 CSB-PGBD3P0DP91 1061 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 SLFNL1Q499Z3 407 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 C4orf17Q53FE4 359 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 PGBD3Q8N328 593 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 DOLKQ9UPQ8 538 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 TBC1D2BQ9UPU7 963 aa7.3□□□□□ -1.24
PTCD3-214ENST00000483925 MSTNO14793 375 aa7.29□□□□□ -1.24
PTCD3-214ENST00000483925 TSGA10IPQ3SY00 556 aa7.29□□□□□ -1.24
PTCD3-214ENST00000483925 AEBP1Q8IUX7 1158 aa7.29□□□□□ -1.24
PTCD3-214ENST00000483925 PHTF2Q8N3S3 785 aa7.29□□□□□ -1.24
PTCD3-214ENST00000483925 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
PTCD3-214ENST00000483925 SIRT1Q96EB6 747 aa7.29□□□□□ -1.24
PTCD3-214ENST00000483925 CCDC97Q96F63 343 aaPredicted RBP7.29□□□□□ -1.24
PTCD3-214ENST00000483925 MSX1P28360 303 aa7.28□□□□□ -1.24
PTCD3-214ENST00000483925 EFHC2Q5JST6 749 aa7.28□□□□□ -1.24
PTCD3-214ENST00000483925 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
PTCD3-214ENST00000483925 GALNT6Q8NCL4 622 aa7.28□□□□□ -1.24
PTCD3-214ENST00000483925 RHBDD1Q8TEB9 315 aa7.28□□□□□ -1.24
PTCD3-214ENST00000483925 RUBCNLQ9H714 662 aa7.28□□□□□ -1.24
PTCD3-214ENST00000483925 GDF2Q9UK05 429 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-214ENST00000483925 UBAP2LQ14157 1087 aaKnown RBP7.27□□□□□ -1.25
PTCD3-214ENST00000483925 TMCO4Q5TGY1 634 aa7.27□□□□□ -1.25
PTCD3-214ENST00000483925 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
PTCD3-214ENST00000483925 ETNK1Q9HBU6 452 aa7.27□□□□□ -1.25
PTCD3-214ENST00000483925 ATXN7L1Q9ULK2 861 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-214ENST00000483925 SNRPNP63162 240 aaKnown RBP7.26□□□□□ -1.25
PTCD3-214ENST00000483925 IRF5Q13568 498 aa7.26□□□□□ -1.25
PTCD3-214ENST00000483925 TLR1Q15399 786 aa7.26□□□□□ -1.25
PTCD3-214ENST00000483925 PROSER2Q86WR7 435 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-214ENST00000483925 SPOCK3Q9BQ16 436 aa7.26□□□□□ -1.25
PTCD3-214ENST00000483925 MKL2Q9ULH7 1088 aa7.26□□□□□ -1.25
PTCD3-214ENST00000483925 SHISA8B8ZZ34 492 aa7.25□□□□□ -1.25
PTCD3-214ENST00000483925 STAU1O95793 577 aaKnown RBP7.25□□□□□ -1.25
PTCD3-214ENST00000483925 OXLD1Q5BKU9 147 aa7.25□□□□□ -1.25
PTCD3-214ENST00000483925 C1orf229Q6ZS94 237 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-214ENST00000483925 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
PTCD3-214ENST00000483925 RGS22Q8NE09 1264 aa7.25□□□□□ -1.25
PTCD3-214ENST00000483925 EDARADDQ8WWZ3 215 aa7.25□□□□□ -1.25
PTCD3-214ENST00000483925 CHIC2Q9UKJ5 165 aa7.25□□□□□ -1.25
PTCD3-214ENST00000483925 ZNF777Q9ULD5 760 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-214ENST00000483925 ITGB2P05107 769 aa7.24□□□□□ -1.25
PTCD3-214ENST00000483925 BMP4P12644 408 aa7.24□□□□□ -1.25
PTCD3-214ENST00000483925 MCM6Q14566 821 aa7.24□□□□□ -1.25
PTCD3-214ENST00000483925 ABHD17AQ96GS6 310 aa7.24□□□□□ -1.25
PTCD3-214ENST00000483925 CRISPLD1Q9H336 500 aa7.24□□□□□ -1.25
PTCD3-214ENST00000483925 RRAGCQ9HB90 399 aa7.24□□□□□ -1.25
PTCD3-214ENST00000483925 SHROOM4Q9ULL8 1493 aa7.24□□□□□ -1.25
PTCD3-214ENST00000483925 BNIP3LO60238 219 aa7.23□□□□□ -1.25
PTCD3-214ENST00000483925 FGFR3P22607 806 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms