RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TMOD3Q9NYL9 352 aa17.99■□□□□ 0.47
UBR4-213ENST00000483922 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
UBR4-213ENST00000483922 ANKRD26Q9UPS8 1709 aa17.98■□□□□ 0.47
UBR4-213ENST00000483922 A0A0G2JLW4 131 aa17.97■□□□□ 0.47
UBR4-213ENST00000483922 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
UBR4-213ENST00000483922 DNAJC5GQ8N7S2 189 aa17.97■□□□□ 0.47
UBR4-213ENST00000483922 CICQ96RK0 1608 aaPredicted RBP17.97■□□□□ 0.47
UBR4-213ENST00000483922 KDRP35968 1356 aa17.96■□□□□ 0.47
UBR4-213ENST00000483922 KCNA3P22001 575 aa17.95■□□□□ 0.46
UBR4-213ENST00000483922 EIF4A2Q14240 407 aaKnown RBP17.95■□□□□ 0.46
UBR4-213ENST00000483922 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
UBR4-213ENST00000483922 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
UBR4-213ENST00000483922 N4BP2Q86UW6 1770 aaPredicted RBP17.94■□□□□ 0.46
UBR4-213ENST00000483922 GYS1P13807 737 aa17.93■□□□□ 0.46
UBR4-213ENST00000483922 DPEP1P16444 411 aa17.93■□□□□ 0.46
UBR4-213ENST00000483922 TGFB2P61812 414 aa17.93■□□□□ 0.46
UBR4-213ENST00000483922 TRAPPC3LQ5T215 181 aa17.93■□□□□ 0.46
UBR4-213ENST00000483922 CDCA8Q53HL2 280 aa17.92■□□□□ 0.46
UBR4-213ENST00000483922 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
UBR4-213ENST00000483922 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
UBR4-213ENST00000483922 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
UBR4-213ENST00000483922 NMRK2Q9NPI5 230 aa17.91■□□□□ 0.46
UBR4-213ENST00000483922 RTCBQ9Y3I0 505 aaKnown RBP17.91■□□□□ 0.46
UBR4-213ENST00000483922 TNNT2P45379 298 aaPredicted RBP17.9■□□□□ 0.46
UBR4-213ENST00000483922 RC3H1Q5TC82 1133 aaKnown RBP17.9■□□□□ 0.46
UBR4-213ENST00000483922 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
UBR4-213ENST00000483922 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
UBR4-213ENST00000483922 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
UBR4-213ENST00000483922 RPS6KA4O75676 772 aa17.89■□□□□ 0.45
UBR4-213ENST00000483922 TOMM70O94826 608 aa17.89■□□□□ 0.45
UBR4-213ENST00000483922 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.45
UBR4-213ENST00000483922 MYH14Q7Z406 1995 aaKnown RBP17.88■□□□□ 0.45
UBR4-213ENST00000483922 ZNF831Q5JPB2 1677 aa17.87■□□□□ 0.45
UBR4-213ENST00000483922 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
UBR4-213ENST00000483922 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
UBR4-213ENST00000483922 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
UBR4-213ENST00000483922 FCHSD2O94868 740 aa17.86■□□□□ 0.45
UBR4-213ENST00000483922 APLP1P51693 650 aa17.86■□□□□ 0.45
UBR4-213ENST00000483922 HTRA3P83110 453 aa17.86■□□□□ 0.45
UBR4-213ENST00000483922 SRP68Q9UHB9 627 aaKnown RBP17.86■□□□□ 0.45
UBR4-213ENST00000483922 PCNTO95613 3336 aa17.86■□□□□ 0.45
UBR4-213ENST00000483922 BRCA1P38398 1863 aaKnown RBP17.86■□□□□ 0.45
UBR4-213ENST00000483922 ADRA2BP18089 450 aa17.85■□□□□ 0.45
UBR4-213ENST00000483922 DDR1Q08345 913 aa17.85■□□□□ 0.45
UBR4-213ENST00000483922 FKBP8Q14318 412 aa17.85■□□□□ 0.45
UBR4-213ENST00000483922 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
UBR4-213ENST00000483922 CCDC87Q9NVE4 849 aa17.85■□□□□ 0.45
UBR4-213ENST00000483922 RFC4P35249 363 aa17.84■□□□□ 0.45
UBR4-213ENST00000483922 C9orf131Q5VYM1 1079 aa17.84■□□□□ 0.45
UBR4-213ENST00000483922 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
UBR4-213ENST00000483922 PTCD1O75127 700 aaKnown RBP17.83■□□□□ 0.44
UBR4-213ENST00000483922 NFATC2IPQ8NCF5 419 aa17.83■□□□□ 0.44
UBR4-213ENST00000483922 PARP3Q9Y6F1 533 aa17.83■□□□□ 0.44
UBR4-213ENST00000483922 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
UBR4-213ENST00000483922 CRKLP46109 303 aaKnown RBP17.82■□□□□ 0.44
UBR4-213ENST00000483922 CABP4P57796 275 aa17.82■□□□□ 0.44
UBR4-213ENST00000483922 TM4SF1P30408 202 aa17.81■□□□□ 0.44
UBR4-213ENST00000483922 CHRNA5P30532 468 aa17.81■□□□□ 0.44
UBR4-213ENST00000483922 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
UBR4-213ENST00000483922 ZNF530Q6P9A1 599 aaPredicted RBP17.81■□□□□ 0.44
UBR4-213ENST00000483922 INTS5Q6P9B9 1019 aaKnown RBP17.81■□□□□ 0.44
UBR4-213ENST00000483922 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
UBR4-213ENST00000483922 PIM2Q9P1W9 311 aa17.8■□□□□ 0.44
UBR4-213ENST00000483922 USP42Q9H9J4 1324 aaKnown RBP17.79■□□□□ 0.44
UBR4-213ENST00000483922 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
UBR4-213ENST00000483922 MTHFSP49914 203 aa17.79■□□□□ 0.44
UBR4-213ENST00000483922 PRELPP51888 382 aa17.79■□□□□ 0.44
UBR4-213ENST00000483922 RBM46Q8TBY0 533 aaKnown RBP17.79■□□□□ 0.44
UBR4-213ENST00000483922 POLR3GLQ9BT43 218 aa17.79■□□□□ 0.44
UBR4-213ENST00000483922 PANK3Q9H999 370 aa17.79■□□□□ 0.44
UBR4-213ENST00000483922 TJP1Q07157 1748 aa17.78■□□□□ 0.44
UBR4-213ENST00000483922 KCPQ6ZWJ8 1503 aa17.78■□□□□ 0.44
UBR4-213ENST00000483922 POLRMTO00411 1230 aaKnown RBP17.78■□□□□ 0.44
UBR4-213ENST00000483922 ARFGEF1Q9Y6D6 1849 aa17.77■□□□□ 0.44
UBR4-213ENST00000483922 AMOTQ4VCS5 1084 aa17.77■□□□□ 0.44
UBR4-213ENST00000483922 DALRD3Q5D0E6 543 aaKnown RBP17.77■□□□□ 0.44
UBR4-213ENST00000483922 RRAGCQ9HB90 399 aa17.77■□□□□ 0.44
UBR4-213ENST00000483922 WDR90Q96KV7 1748 aa17.76■□□□□ 0.43
UBR4-213ENST00000483922 COL13A1Q5TAT6 717 aaPredicted RBP17.76■□□□□ 0.43
UBR4-213ENST00000483922 LGR6Q9HBX8 967 aa17.76■□□□□ 0.43
UBR4-213ENST00000483922 RNF181Q9P0P0 153 aa17.76■□□□□ 0.43
UBR4-213ENST00000483922 IL13P35225 146 aa17.75■□□□□ 0.43
UBR4-213ENST00000483922 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
UBR4-213ENST00000483922 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
UBR4-213ENST00000483922 KLRG1Q96E93 195 aa17.75■□□□□ 0.43
UBR4-213ENST00000483922 USPL1Q5W0Q7 1092 aa17.74■□□□□ 0.43
UBR4-213ENST00000483922 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
UBR4-213ENST00000483922 BCL2L12Q9HB09 334 aa17.74■□□□□ 0.43
UBR4-213ENST00000483922 FSTL1Q12841 308 aa17.73■□□□□ 0.43
UBR4-213ENST00000483922 SBF1O95248 1867 aa17.73■□□□□ 0.43
UBR4-213ENST00000483922 RASSF7Q02833 373 aa17.72■□□□□ 0.43
UBR4-213ENST00000483922 CYP19A1P11511 503 aaPredicted RBP17.71■□□□□ 0.43
UBR4-213ENST00000483922 SLC39A6Q13433 755 aa17.71■□□□□ 0.43
UBR4-213ENST00000483922 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
UBR4-213ENST00000483922 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
UBR4-213ENST00000483922 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.42
UBR4-213ENST00000483922 HSPA5P11021 654 aaKnown RBP17.7■□□□□ 0.42
UBR4-213ENST00000483922 NFIXQ14938 502 aa17.7■□□□□ 0.42
UBR4-213ENST00000483922 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
UBR4-213ENST00000483922 SCN11AQ9UI33 1791 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms