RNA–Protein interactions for RNA: ENST00000483891.1

COPS6-209, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-209ENST00000483891 HTRA3P83110 453 aa8.14□□□□□ -1.11
COPS6-209ENST00000483891 FLAD1Q8NFF5 587 aa8.14□□□□□ -1.11
COPS6-209ENST00000483891 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
COPS6-209ENST00000483891 PRKRIP1Q9H875 184 aaPredicted RBP8.14□□□□□ -1.11
COPS6-209ENST00000483891 NMRK2Q9NPI5 230 aa8.14□□□□□ -1.11
COPS6-209ENST00000483891 BRCA1P38398 1863 aaKnown RBP8.14□□□□□ -1.11
COPS6-209ENST00000483891 KIAA1551Q9HCM1 1747 aa8.14□□□□□ -1.11
COPS6-209ENST00000483891 C5P01031 1676 aa8.14□□□□□ -1.11
COPS6-209ENST00000483891 TNRC6CQ9HCJ0 1690 aaKnown RBP8.14□□□□□ -1.11
COPS6-209ENST00000483891 PXDNLA1KZ92 1463 aa8.13□□□□□ -1.11
COPS6-209ENST00000483891 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
COPS6-209ENST00000483891 MYBBP1AQ9BQG0 1328 aaKnown RBP8.13□□□□□ -1.11
COPS6-209ENST00000483891 ABCB7O75027 752 aa8.13□□□□□ -1.11
COPS6-209ENST00000483891 CSB-PGBD3P0DP91 1061 aa8.13□□□□□ -1.11
COPS6-209ENST00000483891 RALBP1Q15311 655 aa8.13□□□□□ -1.11
COPS6-209ENST00000483891 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
COPS6-209ENST00000483891 DOT1LQ8TEK3 1739 aa8.12□□□□□ -1.11
COPS6-209ENST00000483891 PLEKHG2Q9H7P9 1386 aa8.12□□□□□ -1.11
COPS6-209ENST00000483891 ERBB3P21860 1342 aa8.12□□□□□ -1.11
COPS6-209ENST00000483891 POLA2Q14181 598 aa8.12□□□□□ -1.11
COPS6-209ENST00000483891 UBR3Q6ZT12 1888 aa8.12□□□□□ -1.11
COPS6-209ENST00000483891 LTN1O94822 1766 aa8.12□□□□□ -1.11
COPS6-209ENST00000483891 SBF1O95248 1867 aa8.11□□□□□ -1.11
COPS6-209ENST00000483891 HOXC9P31274 260 aa8.11□□□□□ -1.11
COPS6-209ENST00000483891 MTHFSP49914 203 aa8.11□□□□□ -1.11
COPS6-209ENST00000483891 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
COPS6-209ENST00000483891 MIER1Q8N108 512 aa8.11□□□□□ -1.11
COPS6-209ENST00000483891 PRDM10Q9NQV6 1147 aa8.11□□□□□ -1.11
COPS6-209ENST00000483891 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
COPS6-209ENST00000483891 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
COPS6-209ENST00000483891 RTL1A6NKG5 1358 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 FLT4P35916 1363 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 TOGARAM1Q9Y4F4 1720 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 KCNQ4P56696 695 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 HSP90AB2PQ58FF8 381 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 MSL1Q68DK7 614 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 SMC1BQ8NDV3 1235 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 CFAP53Q96M91 514 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 MRS2Q9HD23 443 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 CCNL1Q9UK58 526 aaPredicted RBP8.1□□□□□ -1.11
COPS6-209ENST00000483891 PDE4DIPQ5VU43 2346 aa8.1□□□□□ -1.11
COPS6-209ENST00000483891 SMG6Q86US8 1419 aaKnown RBP8.1□□□□□ -1.11
COPS6-209ENST00000483891 RGS19P49795 217 aa8.09□□□□□ -1.11
COPS6-209ENST00000483891 CCDC184Q52MB2 194 aa8.09□□□□□ -1.11
COPS6-209ENST00000483891 ANKRD24Q8TF21 1146 aa8.09□□□□□ -1.11
COPS6-209ENST00000483891 N4BP2Q86UW6 1770 aaPredicted RBP8.09□□□□□ -1.11
COPS6-209ENST00000483891 KDM2BQ8NHM5 1336 aa8.08□□□□□ -1.12
COPS6-209ENST00000483891 COL3A1P02461 1466 aaPredicted RBP8.08□□□□□ -1.12
COPS6-209ENST00000483891 U2SURPO15042 1029 aaKnown RBP8.08□□□□□ -1.12
COPS6-209ENST00000483891 PRIM1P49642 420 aaKnown RBP8.08□□□□□ -1.12
COPS6-209ENST00000483891 TGFB2P61812 414 aa8.08□□□□□ -1.12
COPS6-209ENST00000483891 USHBP1Q8N6Y0 703 aa8.08□□□□□ -1.12
COPS6-209ENST00000483891 IP6K1Q92551 441 aa8.08□□□□□ -1.12
COPS6-209ENST00000483891 C4BP0C0L5 1744 aa8.08□□□□□ -1.12
COPS6-209ENST00000483891 EIF4A2Q14240 407 aaKnown RBP8.07□□□□□ -1.12
COPS6-209ENST00000483891 FAM161AQ3B820 660 aa8.07□□□□□ -1.12
COPS6-209ENST00000483891 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
COPS6-209ENST00000483891 INSRP06213 1382 aa8.07□□□□□ -1.12
COPS6-209ENST00000483891 MAP2P11137 1827 aaKnown RBP8.06□□□□□ -1.12
COPS6-209ENST00000483891 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
COPS6-209ENST00000483891 WDR43Q15061 677 aaKnown RBP eCLIP8.06□□□□□ -1.125e-7■■□□□ 13.9
COPS6-209ENST00000483891 KCPQ6ZWJ8 1503 aa8.06□□□□□ -1.12
COPS6-209ENST00000483891 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
COPS6-209ENST00000483891 ZC3H4Q9UPT8 1303 aaKnown RBP8.05□□□□□ -1.12
COPS6-209ENST00000483891 TNRC18O15417 2968 aaPredicted RBP8.05□□□□□ -1.12
COPS6-209ENST00000483891 HMOX1P09601 288 aa8.05□□□□□ -1.12
COPS6-209ENST00000483891 U2AF1L5P0DN76 240 aaPredicted RBP8.05□□□□□ -1.12
COPS6-209ENST00000483891 U2AF1Q01081 240 aaKnown RBP eCLIP8.05□□□□□ -1.12
COPS6-209ENST00000483891 FAM9BQ8IZU0 186 aa8.05□□□□□ -1.12
COPS6-209ENST00000483891 VIRMAQ69YN4 1812 aaKnown RBP8.04□□□□□ -1.12
COPS6-209ENST00000483891 SSFA2P28290 1259 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 DSG3P32926 999 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 IL13P35225 146 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 C9orf131Q5VYM1 1079 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 ARHGAP27Q6ZUM4 889 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 AEBP1Q8IUX7 1158 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 CCDC146Q8IYE0 955 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 DDX54Q8TDD1 881 aaKnown RBP8.04□□□□□ -1.12
COPS6-209ENST00000483891 SYTL4Q96C24 671 aaPredicted RBP8.04□□□□□ -1.12
COPS6-209ENST00000483891 RRAGCQ9HB90 399 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 NUDCQ9Y266 331 aa8.04□□□□□ -1.12
COPS6-209ENST00000483891 ITGB4P16144 1822 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 CCER2I3L3R5 266 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 FOXN1O15353 648 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 MLLT1Q03111 559 aaPredicted RBP8.03□□□□□ -1.12
COPS6-209ENST00000483891 NBPF6Q5VWK0 638 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 SULT6B1Q6IMI4 303 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 AMIGO3Q86WK7 504 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 NBPF4Q96M43 638 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 EYA1Q99502 592 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 BCS1LQ9Y276 419 aa8.03□□□□□ -1.12
COPS6-209ENST00000483891 CTCFP49711 727 aaPredicted RBP8.02□□□□□ -1.13
COPS6-209ENST00000483891 ABHD8Q96I13 439 aa8.02□□□□□ -1.13
COPS6-209ENST00000483891 CREBZFQ9NS37 354 aa8.02□□□□□ -1.13
COPS6-209ENST00000483891 KDM6AO15550 1401 aaPredicted RBP8.02□□□□□ -1.13
COPS6-209ENST00000483891 RGPD2P0DJD1 1756 aa8.02□□□□□ -1.13
COPS6-209ENST00000483891 CCDC88AQ3V6T2 1871 aa8.01□□□□□ -1.13
COPS6-209ENST00000483891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.01□□□□□ -1.13
COPS6-209ENST00000483891 VEGFAP15692 232 aaPredicted RBP8.01□□□□□ -1.13
COPS6-209ENST00000483891 PRKAR2BP31323 418 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms