RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 SMIM5Q71RC9 77 aa20.07■□□□□ 0.8
NR1H3-222ENST00000483882 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
NR1H3-222ENST00000483882 LINC00116Q8NCU8 138 aa20.06■□□□□ 0.8
NR1H3-222ENST00000483882 ASAP1Q9ULH1 1129 aa20.06■□□□□ 0.8
NR1H3-222ENST00000483882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
NR1H3-222ENST00000483882 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
NR1H3-222ENST00000483882 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
NR1H3-222ENST00000483882 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
NR1H3-222ENST00000483882 ATP6V1AP38606 617 aa20.04■□□□□ 0.8
NR1H3-222ENST00000483882 GRIN3BO60391 1043 aa20.03■□□□□ 0.8
NR1H3-222ENST00000483882 ITPK1Q13572 414 aa20.03■□□□□ 0.8
NR1H3-222ENST00000483882 ATG3Q9NT62 314 aa20.03■□□□□ 0.8
NR1H3-222ENST00000483882 CD2APQ9Y5K6 639 aa20.03■□□□□ 0.8
NR1H3-222ENST00000483882 GNPATO15228 680 aa20.02■□□□□ 0.8
NR1H3-222ENST00000483882 SSFA2P28290 1259 aa20.02■□□□□ 0.8
NR1H3-222ENST00000483882 PLEKHO1Q53GL0 409 aaPredicted RBP20.02■□□□□ 0.8
NR1H3-222ENST00000483882 PLEKHG2Q9H7P9 1386 aa20.01■□□□□ 0.79
NR1H3-222ENST00000483882 DIAPH1O60610 1272 aaKnown RBP20.01■□□□□ 0.79
NR1H3-222ENST00000483882 UBR3Q6ZT12 1888 aa20.01■□□□□ 0.79
NR1H3-222ENST00000483882 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
NR1H3-222ENST00000483882 CCDC184Q52MB2 194 aa20■□□□□ 0.79
NR1H3-222ENST00000483882 ZNF530Q6P9A1 599 aaPredicted RBP20■□□□□ 0.79
NR1H3-222ENST00000483882 ANP32CO43423 234 aa19.99■□□□□ 0.79
NR1H3-222ENST00000483882 ERVV-2B6SEH9 535 aa19.98■□□□□ 0.79
NR1H3-222ENST00000483882 C1QTNF8P60827 252 aa19.98■□□□□ 0.79
NR1H3-222ENST00000483882 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
NR1H3-222ENST00000483882 DCAF5Q96JK2 942 aa19.98■□□□□ 0.79
NR1H3-222ENST00000483882 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
NR1H3-222ENST00000483882 UTRNP46939 3433 aa19.97■□□□□ 0.79
NR1H3-222ENST00000483882 AMOTQ4VCS5 1084 aa19.97■□□□□ 0.79
NR1H3-222ENST00000483882 CFAP53Q96M91 514 aa19.97■□□□□ 0.79
NR1H3-222ENST00000483882 GIGYF1O75420 1035 aaPredicted RBP19.96■□□□□ 0.79
NR1H3-222ENST00000483882 CABP4P57796 275 aa19.96■□□□□ 0.79
NR1H3-222ENST00000483882 WWC3Q9ULE0 1092 aa19.96■□□□□ 0.79
NR1H3-222ENST00000483882 KDRP35968 1356 aa19.95■□□□□ 0.79
NR1H3-222ENST00000483882 SENP3-EIF4A1A0A087X0R7 540 aa19.95■□□□□ 0.78
NR1H3-222ENST00000483882 C1orf141Q5JVX7 400 aa19.95■□□□□ 0.78
NR1H3-222ENST00000483882 KDM6AO15550 1401 aaPredicted RBP19.94■□□□□ 0.78
NR1H3-222ENST00000483882 DIEXFQ68CQ4 756 aaKnown RBP19.94■□□□□ 0.78
NR1H3-222ENST00000483882 SULT6B1Q6IMI4 303 aa19.94■□□□□ 0.78
NR1H3-222ENST00000483882 SLC4A9Q96Q91 983 aa19.94■□□□□ 0.78
NR1H3-222ENST00000483882 RTCBQ9Y3I0 505 aaKnown RBP19.94■□□□□ 0.78
NR1H3-222ENST00000483882 TRAPPC3LQ5T215 181 aa19.93■□□□□ 0.78
NR1H3-222ENST00000483882 U2SURPO15042 1029 aaKnown RBP19.92■□□□□ 0.78
NR1H3-222ENST00000483882 MMP10P09238 476 aa19.92■□□□□ 0.78
NR1H3-222ENST00000483882 HMOX1P09601 288 aa19.92■□□□□ 0.78
NR1H3-222ENST00000483882 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
NR1H3-222ENST00000483882 RC3H1Q5TC82 1133 aaKnown RBP19.89■□□□□ 0.77
NR1H3-222ENST00000483882 NFATC2IPQ8NCF5 419 aa19.89■□□□□ 0.77
NR1H3-222ENST00000483882 CNTNAP4Q9C0A0 1308 aa19.89■□□□□ 0.77
NR1H3-222ENST00000483882 ATP10DQ9P241 1426 aa19.89■□□□□ 0.77
NR1H3-222ENST00000483882 ADRA2BP18089 450 aa19.88■□□□□ 0.77
NR1H3-222ENST00000483882 RFC4P35249 363 aa19.88■□□□□ 0.77
NR1H3-222ENST00000483882 NLGN1Q8N2Q7 840 aa19.88■□□□□ 0.77
NR1H3-222ENST00000483882 ARHGEF1Q92888 912 aaKnown RBP19.88■□□□□ 0.77
NR1H3-222ENST00000483882 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
NR1H3-222ENST00000483882 NUDCQ9Y266 331 aa19.88■□□□□ 0.77
NR1H3-222ENST00000483882 RPS6KA4O75676 772 aa19.87■□□□□ 0.77
NR1H3-222ENST00000483882 U2AF1L5P0DN76 240 aaPredicted RBP19.87■□□□□ 0.77
NR1H3-222ENST00000483882 U2AF1Q01081 240 aaKnown RBP eCLIP19.87■□□□□ 0.77
NR1H3-222ENST00000483882 ZNF831Q5JPB2 1677 aa19.87■□□□□ 0.77
NR1H3-222ENST00000483882 COL5A3P25940 1745 aaPredicted RBP19.86■□□□□ 0.77
NR1H3-222ENST00000483882 CICQ96RK0 1608 aaPredicted RBP19.85■□□□□ 0.77
NR1H3-222ENST00000483882 GYS1P13807 737 aa19.84■□□□□ 0.77
NR1H3-222ENST00000483882 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
NR1H3-222ENST00000483882 MIER1Q8N108 512 aa19.84■□□□□ 0.77
NR1H3-222ENST00000483882 ZNF526Q8TF50 670 aaPredicted RBP19.84■□□□□ 0.77
NR1H3-222ENST00000483882 GPBP1L1Q9HC44 474 aaPredicted RBP19.84■□□□□ 0.77
NR1H3-222ENST00000483882 FCHSD2O94868 740 aa19.83■□□□□ 0.77
NR1H3-222ENST00000483882 PRKAR2BP31323 418 aa19.83■□□□□ 0.77
NR1H3-222ENST00000483882 CRKLP46109 303 aaKnown RBP19.83■□□□□ 0.77
NR1H3-222ENST00000483882 PHACTR3Q96KR7 559 aa19.83■□□□□ 0.77
NR1H3-222ENST00000483882 MRS2Q9HD23 443 aa19.83■□□□□ 0.77
NR1H3-222ENST00000483882 CCDC87Q9NVE4 849 aa19.83■□□□□ 0.77
NR1H3-222ENST00000483882 PARP3Q9Y6F1 533 aa19.83■□□□□ 0.77
NR1H3-222ENST00000483882 PXDNLA1KZ92 1463 aa19.83■□□□□ 0.76
NR1H3-222ENST00000483882 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
NR1H3-222ENST00000483882 PLEKHF1Q96S99 279 aa19.82■□□□□ 0.76
NR1H3-222ENST00000483882 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
NR1H3-222ENST00000483882 ADCY9O60503 1353 aa19.82■□□□□ 0.76
NR1H3-222ENST00000483882 A0A0G2JLW4 131 aa19.81■□□□□ 0.76
NR1H3-222ENST00000483882 TGFB2P61812 414 aa19.81■□□□□ 0.76
NR1H3-222ENST00000483882 C10orf71Q711Q0 1435 aa19.81■□□□□ 0.76
NR1H3-222ENST00000483882 GOLGB1Q14789 3259 aaKnown RBP19.8■□□□□ 0.76
NR1H3-222ENST00000483882 MTHFSDQ2M296 383 aaKnown RBP19.8■□□□□ 0.76
NR1H3-222ENST00000483882 SLC52A2Q9HAB3 445 aa19.8■□□□□ 0.76
NR1H3-222ENST00000483882 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
NR1H3-222ENST00000483882 SRP68Q9UHB9 627 aaKnown RBP19.8■□□□□ 0.76
NR1H3-222ENST00000483882 BCS1LQ9Y276 419 aa19.8■□□□□ 0.76
NR1H3-222ENST00000483882 C4AP0C0L4 1744 aa19.79■□□□□ 0.76
NR1H3-222ENST00000483882 SCN11AQ9UI33 1791 aa19.79■□□□□ 0.76
NR1H3-222ENST00000483882 MYH14Q7Z406 1995 aaKnown RBP19.79■□□□□ 0.76
NR1H3-222ENST00000483882 TJP1Q07157 1748 aa19.79■□□□□ 0.76
NR1H3-222ENST00000483882 RNMTO43148 476 aaKnown RBP19.78■□□□□ 0.76
NR1H3-222ENST00000483882 DPEP1P16444 411 aa19.78■□□□□ 0.76
NR1H3-222ENST00000483882 DNAJC10Q8IXB1 793 aa19.78■□□□□ 0.76
NR1H3-222ENST00000483882 KIF13BQ9NQT8 1826 aa19.78■□□□□ 0.76
NR1H3-222ENST00000483882 N4BP2Q86UW6 1770 aaPredicted RBP19.78■□□□□ 0.76
NR1H3-222ENST00000483882 USP42Q9H9J4 1324 aaKnown RBP19.77■□□□□ 0.76
NR1H3-222ENST00000483882 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms