RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ARHGAP27Q6ZUM4 889 aa15.26■□□□□ 0.03
SMARCC1-205ENST00000483847 TMOD3Q9NYL9 352 aa15.26■□□□□ 0.03
SMARCC1-205ENST00000483847 TONSLQ96HA7 1378 aa15.25■□□□□ 0.03
SMARCC1-205ENST00000483847 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
SMARCC1-205ENST00000483847 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
SMARCC1-205ENST00000483847 DPEP1P16444 411 aa15.24■□□□□ 0.03
SMARCC1-205ENST00000483847 TGFB2P61812 414 aa15.24■□□□□ 0.03
SMARCC1-205ENST00000483847 COL13A1Q5TAT6 717 aaPredicted RBP15.24■□□□□ 0.03
SMARCC1-205ENST00000483847 ATG3Q9NT62 314 aa15.24■□□□□ 0.03
SMARCC1-205ENST00000483847 C4AP0C0L4 1744 aa15.23■□□□□ 0.03
SMARCC1-205ENST00000483847 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
SMARCC1-205ENST00000483847 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
SMARCC1-205ENST00000483847 KDRP35968 1356 aa15.23■□□□□ 0.03
SMARCC1-205ENST00000483847 FCHSD2O94868 740 aa15.22■□□□□ 0.03
SMARCC1-205ENST00000483847 PPM1GO15355 546 aaPredicted RBP15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 PHKG2P15735 406 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 TMF1P82094 1093 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 RBM46Q8TBY0 533 aaKnown RBP15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 ARHGEF1Q92888 912 aaKnown RBP15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 KLRG1Q96E93 195 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 EYA1Q99502 592 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 CARD14Q9BXL6 1004 aa15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
SMARCC1-205ENST00000483847 PCNTO95613 3336 aa15.2■□□□□ 0.02
SMARCC1-205ENST00000483847 COL5A3P25940 1745 aaPredicted RBP15.2■□□□□ 0.02
SMARCC1-205ENST00000483847 ARFGEF1Q9Y6D6 1849 aa15.2■□□□□ 0.02
SMARCC1-205ENST00000483847 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
SMARCC1-205ENST00000483847 GYS1P13807 737 aa15.2■□□□□ 0.02
SMARCC1-205ENST00000483847 KCNA3P22001 575 aa15.2■□□□□ 0.02
SMARCC1-205ENST00000483847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.2■□□□□ 0.027e-11■■■■□ 19.6
SMARCC1-205ENST00000483847 KCPQ6ZWJ8 1503 aa15.2■□□□□ 0.02
SMARCC1-205ENST00000483847 CAPN15O75808 1086 aa15.19■□□□□ 0.02
SMARCC1-205ENST00000483847 IFNL2Q8IZJ0 200 aa15.19■□□□□ 0.02
SMARCC1-205ENST00000483847 JMYQ8N9B5 988 aa15.19■□□□□ 0.02
SMARCC1-205ENST00000483847 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
SMARCC1-205ENST00000483847 ZNF831Q5JPB2 1677 aa15.19■□□□□ 0.02
SMARCC1-205ENST00000483847 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
SMARCC1-205ENST00000483847 C16orf71Q8IYS4 520 aaPredicted RBP15.18■□□□□ 0.02
SMARCC1-205ENST00000483847 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
SMARCC1-205ENST00000483847 MYH14Q7Z406 1995 aaKnown RBP15.17■□□□□ 0.02
SMARCC1-205ENST00000483847 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
SMARCC1-205ENST00000483847 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
SMARCC1-205ENST00000483847 RPS6KA4O75676 772 aa15.16■□□□□ 0.02
SMARCC1-205ENST00000483847 RFC4P35249 363 aa15.16■□□□□ 0.02
SMARCC1-205ENST00000483847 FSTL1Q12841 308 aa15.16■□□□□ 0.02
SMARCC1-205ENST00000483847 CNTNAP4Q9C0A0 1308 aa15.16■□□□□ 0.02
SMARCC1-205ENST00000483847 ADRA2BP18089 450 aa15.15■□□□□ 0.02
SMARCC1-205ENST00000483847 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
SMARCC1-205ENST00000483847 DCAF5Q96JK2 942 aa15.15■□□□□ 0.02
SMARCC1-205ENST00000483847 RRAGCQ9HB90 399 aa15.15■□□□□ 0.02
SMARCC1-205ENST00000483847 RNF181Q9P0P0 153 aa15.15■□□□□ 0.02
SMARCC1-205ENST00000483847 PIM2Q9P1W9 311 aa15.15■□□□□ 0.02
SMARCC1-205ENST00000483847 TNRC6CQ9HCJ0 1690 aaKnown RBP15.14■□□□□ 0.01
SMARCC1-205ENST00000483847 SRP68Q9UHB9 627 aaKnown RBP15.14■□□□□ 0.01
SMARCC1-205ENST00000483847 SBF1O95248 1867 aa15.14■□□□□ 0.01
SMARCC1-205ENST00000483847 KDM2BQ8NHM5 1336 aa15.14■□□□□ 0.01
SMARCC1-205ENST00000483847 CHRNA5P30532 468 aa15.13■□□□□ 0.01
SMARCC1-205ENST00000483847 DDR1Q08345 913 aa15.13■□□□□ 0.01
SMARCC1-205ENST00000483847 EIF4A2Q14240 407 aaKnown RBP15.13■□□□□ 0.01
SMARCC1-205ENST00000483847 DALRD3Q5D0E6 543 aaKnown RBP15.13■□□□□ 0.01
SMARCC1-205ENST00000483847 TNS4Q8IZW8 715 aa15.13■□□□□ 0.01
SMARCC1-205ENST00000483847 POLKQ9UBT6 870 aa15.13■□□□□ 0.01
SMARCC1-205ENST00000483847 KDM6AO15550 1401 aaPredicted RBP15.12■□□□□ 0.01
SMARCC1-205ENST00000483847 ERVV-2B6SEH9 535 aa15.12■□□□□ 0.01
SMARCC1-205ENST00000483847 FKBP8Q14318 412 aa15.12■□□□□ 0.01
SMARCC1-205ENST00000483847 TJP1Q07157 1748 aa15.1■□□□□ 0.01
SMARCC1-205ENST00000483847 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
SMARCC1-205ENST00000483847 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
SMARCC1-205ENST00000483847 ADAMTS7Q9UKP4 1686 aa15.09■□□□□ 0.01
SMARCC1-205ENST00000483847 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
SMARCC1-205ENST00000483847 PRELPP51888 382 aa15.09■□□□□ 0.01
SMARCC1-205ENST00000483847 RASSF7Q02833 373 aa15.09■□□□□ 0.01
SMARCC1-205ENST00000483847 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
SMARCC1-205ENST00000483847 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
SMARCC1-205ENST00000483847 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
SMARCC1-205ENST00000483847 CABP4P57796 275 aa15.08■□□□□ 0
SMARCC1-205ENST00000483847 POLRMTO00411 1230 aaKnown RBP15.07■□□□□ 0
SMARCC1-205ENST00000483847 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
SMARCC1-205ENST00000483847 HSP90AB1P08238 724 aaKnown RBP15.06■□□□□ 0
SMARCC1-205ENST00000483847 TM4SF1P30408 202 aa15.06■□□□□ 0
SMARCC1-205ENST00000483847 HSPA1AP0DMV8 641 aaKnown RBP15.05■□□□□ -0
SMARCC1-205ENST00000483847 HSPA1BP0DMV9 641 aaKnown RBP15.05■□□□□ -0
SMARCC1-205ENST00000483847 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
SMARCC1-205ENST00000483847 INTS5Q6P9B9 1019 aaKnown RBP15.05■□□□□ -0
SMARCC1-205ENST00000483847 NFATC2IPQ8NCF5 419 aa15.05■□□□□ -0
SMARCC1-205ENST00000483847 AFDNP55196 1824 aaKnown RBP15.04■□□□□ -0
SMARCC1-205ENST00000483847 TIAM2Q8IVF5 1701 aa15.04■□□□□ -0
SMARCC1-205ENST00000483847 MTHFSP49914 203 aa15.04■□□□□ -0
SMARCC1-205ENST00000483847 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
SMARCC1-205ENST00000483847 USPL1Q5W0Q7 1092 aa15.03■□□□□ -0
SMARCC1-205ENST00000483847 DLEC1Q9Y238 1755 aa15.03■□□□□ -0
SMARCC1-205ENST00000483847 CCDC88AQ3V6T2 1871 aa15.02■□□□□ -0
SMARCC1-205ENST00000483847 ZC3H4Q9UPT8 1303 aaKnown RBP15.02■□□□□ -0
SMARCC1-205ENST00000483847 GLTPD2A6NH11 291 aa15.02■□□□□ -0
SMARCC1-205ENST00000483847 VEGFAP15692 232 aaPredicted RBP15.02■□□□□ -0
SMARCC1-205ENST00000483847 LMNB1P20700 586 aa15.02■□□□□ -0
SMARCC1-205ENST00000483847 NRXN2Q9P2S2 1712 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms