RNA–Protein interactions for RNA: ENST00000483638.1

LRRC8A-204, Transcript of leucine rich repeat containing 8 VRAC subunit A, humanhuman

TSL 3

Gene LRRC8A, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8A-204ENST00000483638 HMGB2P26583 209 aaKnown RBP16.14■□□□□ 0.17
LRRC8A-204ENST00000483638 CABP4P57796 275 aa16.14■□□□□ 0.17
LRRC8A-204ENST00000483638 COL23A1Q86Y22 540 aaPredicted RBP16.14■□□□□ 0.17
LRRC8A-204ENST00000483638 AK7Q96M32 723 aa16.14■□□□□ 0.17
LRRC8A-204ENST00000483638 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.17
LRRC8A-204ENST00000483638 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 MSH5O43196 834 aa16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 ITPK1Q13572 414 aa16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 AKAP4Q5JQC9 854 aa16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 ARXQ96QS3 562 aa16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
LRRC8A-204ENST00000483638 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
LRRC8A-204ENST00000483638 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
LRRC8A-204ENST00000483638 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
LRRC8A-204ENST00000483638 SIPA1L3O60292 1781 aaPredicted RBP16.11■□□□□ 0.17
LRRC8A-204ENST00000483638 POLD1P28340 1107 aa16.11■□□□□ 0.17
LRRC8A-204ENST00000483638 NFATC2IPQ8NCF5 419 aa16.11■□□□□ 0.17
LRRC8A-204ENST00000483638 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
LRRC8A-204ENST00000483638 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
LRRC8A-204ENST00000483638 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
LRRC8A-204ENST00000483638 PHF14O94880 888 aa16.1■□□□□ 0.17
LRRC8A-204ENST00000483638 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
LRRC8A-204ENST00000483638 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
LRRC8A-204ENST00000483638 SYT17Q9BSW7 474 aa16.1■□□□□ 0.17
LRRC8A-204ENST00000483638 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
LRRC8A-204ENST00000483638 MAP3K5Q99683 1374 aa16.1■□□□□ 0.17
LRRC8A-204ENST00000483638 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
LRRC8A-204ENST00000483638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.16
LRRC8A-204ENST00000483638 GNPATO15228 680 aa16.08■□□□□ 0.16
LRRC8A-204ENST00000483638 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
LRRC8A-204ENST00000483638 SLC52A2Q9HAB3 445 aa16.08■□□□□ 0.16
LRRC8A-204ENST00000483638 LGR6Q9HBX8 967 aa16.08■□□□□ 0.16
LRRC8A-204ENST00000483638 RNMTO43148 476 aaKnown RBP16.07■□□□□ 0.16
LRRC8A-204ENST00000483638 SSFA2P28290 1259 aa16.07■□□□□ 0.16
LRRC8A-204ENST00000483638 KCPQ6ZWJ8 1503 aa16.06■□□□□ 0.16
LRRC8A-204ENST00000483638 PTCD1O75127 700 aaKnown RBP16.06■□□□□ 0.16
LRRC8A-204ENST00000483638 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
LRRC8A-204ENST00000483638 RSPH6AQ9H0K4 717 aa16.06■□□□□ 0.16
LRRC8A-204ENST00000483638 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
LRRC8A-204ENST00000483638 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
LRRC8A-204ENST00000483638 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
LRRC8A-204ENST00000483638 DCAF8L1A6NGE4 600 aa16.05■□□□□ 0.16
LRRC8A-204ENST00000483638 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
LRRC8A-204ENST00000483638 CHD4Q14839 1912 aa16.05■□□□□ 0.16
LRRC8A-204ENST00000483638 U2AF1L5P0DN76 240 aaPredicted RBP16.04■□□□□ 0.16
LRRC8A-204ENST00000483638 U2AF1Q01081 240 aaKnown RBP eCLIP16.04■□□□□ 0.16
LRRC8A-204ENST00000483638 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
LRRC8A-204ENST00000483638 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
LRRC8A-204ENST00000483638 RTCBQ9Y3I0 505 aaKnown RBP16.03■□□□□ 0.16
LRRC8A-204ENST00000483638 SLC39A6Q13433 755 aa16.02■□□□□ 0.16
LRRC8A-204ENST00000483638 RC3H1Q5TC82 1133 aaKnown RBP16.02■□□□□ 0.16
LRRC8A-204ENST00000483638 UTRNP46939 3433 aa16.01■□□□□ 0.15
LRRC8A-204ENST00000483638 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
LRRC8A-204ENST00000483638 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
LRRC8A-204ENST00000483638 RPS6KA4O75676 772 aa16■□□□□ 0.15
LRRC8A-204ENST00000483638 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
LRRC8A-204ENST00000483638 IL17REQ8NFR9 667 aa16■□□□□ 0.15
LRRC8A-204ENST00000483638 KIF13BQ9NQT8 1826 aa16■□□□□ 0.15
LRRC8A-204ENST00000483638 FCHSD2O94868 740 aa15.99■□□□□ 0.15
LRRC8A-204ENST00000483638 ADRA2BP18089 450 aa15.99■□□□□ 0.15
LRRC8A-204ENST00000483638 TEFQ10587 303 aa15.99■□□□□ 0.15
LRRC8A-204ENST00000483638 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
LRRC8A-204ENST00000483638 DNAJC10Q8IXB1 793 aa15.99■□□□□ 0.15
LRRC8A-204ENST00000483638 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
LRRC8A-204ENST00000483638 ARHGEF1Q92888 912 aaKnown RBP15.98■□□□□ 0.15
LRRC8A-204ENST00000483638 GOLGB1Q14789 3259 aaKnown RBP15.97■□□□□ 0.15
LRRC8A-204ENST00000483638 KIAA1551Q9HCM1 1747 aa15.97■□□□□ 0.15
LRRC8A-204ENST00000483638 TTC5Q8N0Z6 440 aa15.97■□□□□ 0.15
LRRC8A-204ENST00000483638 RFC4P35249 363 aa15.96■□□□□ 0.15
LRRC8A-204ENST00000483638 RALBP1Q15311 655 aa15.96■□□□□ 0.15
LRRC8A-204ENST00000483638 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
LRRC8A-204ENST00000483638 MMP10P09238 476 aa15.95■□□□□ 0.14
LRRC8A-204ENST00000483638 YY1P25490 414 aa15.95■□□□□ 0.14
LRRC8A-204ENST00000483638 PELP1Q8IZL8 1130 aaKnown RBP15.95■□□□□ 0.14
LRRC8A-204ENST00000483638 CCDC87Q9NVE4 849 aa15.95■□□□□ 0.14
LRRC8A-204ENST00000483638 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
LRRC8A-204ENST00000483638 N4BP2Q86UW6 1770 aaPredicted RBP15.95■□□□□ 0.14
LRRC8A-204ENST00000483638 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 GYS1P13807 737 aa15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 GPR162Q16538 588 aa15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 ZNF790Q6PG37 636 aa15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 VSIG10Q8N0Z9 540 aa15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 HEG1Q9ULI3 1381 aa15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
LRRC8A-204ENST00000483638 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 MCM10Q7L590 875 aa15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 RTF1Q92541 710 aaKnown RBP15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 SRP68Q9UHB9 627 aaKnown RBP15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 ZBTB1Q9Y2K1 713 aa15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 AFDNP55196 1824 aaKnown RBP15.93■□□□□ 0.14
LRRC8A-204ENST00000483638 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
LRRC8A-204ENST00000483638 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
LRRC8A-204ENST00000483638 COL15A1P39059 1388 aa15.92■□□□□ 0.14
LRRC8A-204ENST00000483638 DCTN1Q14203 1278 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms