RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 MTHFSP49914 203 aa26.94■■□□□ 1.9
HPS4-213ENST00000483631 C1orf141Q5JVX7 400 aa26.94■■□□□ 1.9
HPS4-213ENST00000483631 ATP6V1AP38606 617 aa26.92■■□□□ 1.9
HPS4-213ENST00000483631 LINC00116Q8NCU8 138 aa26.92■■□□□ 1.9
HPS4-213ENST00000483631 SCN11AQ9UI33 1791 aa26.9■■□□□ 1.9
HPS4-213ENST00000483631 ITPK1Q13572 414 aa26.9■■□□□ 1.9
HPS4-213ENST00000483631 CABP4P57796 275 aa26.89■■□□□ 1.9
HPS4-213ENST00000483631 CC2D1BQ5T0F9 858 aaKnown RBP26.89■■□□□ 1.9
HPS4-213ENST00000483631 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.88■■□□□ 1.89
HPS4-213ENST00000483631 COL5A3P25940 1745 aaPredicted RBP26.87■■□□□ 1.89
HPS4-213ENST00000483631 DIAPH1O60610 1272 aaKnown RBP26.86■■□□□ 1.89
HPS4-213ENST00000483631 AKAP4Q5JQC9 854 aa26.86■■□□□ 1.89
HPS4-213ENST00000483631 AMIGO3Q86WK7 504 aa26.86■■□□□ 1.89
HPS4-213ENST00000483631 KLHL34Q8N239 644 aa26.86■■□□□ 1.89
HPS4-213ENST00000483631 RC3H1Q5TC82 1133 aaKnown RBP26.85■■□□□ 1.89
HPS4-213ENST00000483631 MSL1Q68DK7 614 aa26.85■■□□□ 1.89
HPS4-213ENST00000483631 CD2APQ9Y5K6 639 aa26.85■■□□□ 1.89
HPS4-213ENST00000483631 CICQ96RK0 1608 aaPredicted RBP26.84■■□□□ 1.89
HPS4-213ENST00000483631 GNPATO15228 680 aa26.84■■□□□ 1.89
HPS4-213ENST00000483631 PHF14O94880 888 aa26.83■■□□□ 1.89
HPS4-213ENST00000483631 GPR162Q16538 588 aa26.83■■□□□ 1.89
HPS4-213ENST00000483631 SLC4A9Q96Q91 983 aa26.83■■□□□ 1.89
HPS4-213ENST00000483631 UTRNP46939 3433 aa26.83■■□□□ 1.89
HPS4-213ENST00000483631 COL3A1P02461 1466 aaPredicted RBP26.82■■□□□ 1.88
HPS4-213ENST00000483631 VIRMAQ69YN4 1812 aaKnown RBP26.82■■□□□ 1.88
HPS4-213ENST00000483631 RBM42Q9BTD8 480 aaKnown RBP26.82■■□□□ 1.88
HPS4-213ENST00000483631 CNTNAP4Q9C0A0 1308 aa26.82■■□□□ 1.88
HPS4-213ENST00000483631 ADRA2BP18089 450 aa26.81■■□□□ 1.88
HPS4-213ENST00000483631 NFATC2IPQ8NCF5 419 aa26.81■■□□□ 1.88
HPS4-213ENST00000483631 NLGN2Q8NFZ4 835 aa26.81■■□□□ 1.88
HPS4-213ENST00000483631 ADAMTS7Q9UKP4 1686 aa26.8■■□□□ 1.88
HPS4-213ENST00000483631 RTCBQ9Y3I0 505 aaKnown RBP26.8■■□□□ 1.88
HPS4-213ENST00000483631 MRC1P22897 1456 aa26.8■■□□□ 1.88
HPS4-213ENST00000483631 HMOX1P09601 288 aa26.79■■□□□ 1.88
HPS4-213ENST00000483631 MYH14Q7Z406 1995 aaKnown RBP26.78■■□□□ 1.88
HPS4-213ENST00000483631 TRAPPC3LQ5T215 181 aa26.77■■□□□ 1.88
HPS4-213ENST00000483631 SLC52A2Q9HAB3 445 aa26.77■■□□□ 1.88
HPS4-213ENST00000483631 RPS6KA4O75676 772 aa26.76■■□□□ 1.87
HPS4-213ENST00000483631 GRIN3BO60391 1043 aa26.75■■□□□ 1.87
HPS4-213ENST00000483631 SMIM5Q71RC9 77 aa26.75■■□□□ 1.87
HPS4-213ENST00000483631 RNMTO43148 476 aaKnown RBP26.74■■□□□ 1.87
HPS4-213ENST00000483631 MTHFSDQ2M296 383 aaKnown RBP26.74■■□□□ 1.87
HPS4-213ENST00000483631 TJP1Q07157 1748 aa26.73■■□□□ 1.87
HPS4-213ENST00000483631 PTCD1O75127 700 aaKnown RBP26.73■■□□□ 1.87
HPS4-213ENST00000483631 NLGN1Q8N2Q7 840 aa26.73■■□□□ 1.87
HPS4-213ENST00000483631 LGR6Q9HBX8 967 aa26.72■■□□□ 1.87
HPS4-213ENST00000483631 PELP1Q8IZL8 1130 aaKnown RBP26.71■■□□□ 1.87
HPS4-213ENST00000483631 ZNF784Q8NCA9 323 aaPredicted RBP26.71■■□□□ 1.87
HPS4-213ENST00000483631 ARHGEF1Q92888 912 aaKnown RBP26.71■■□□□ 1.87
HPS4-213ENST00000483631 CFAP53Q96M91 514 aa26.71■■□□□ 1.87
HPS4-213ENST00000483631 C4AP0C0L4 1744 aa26.7■■□□□ 1.87
HPS4-213ENST00000483631 KIF13BQ9NQT8 1826 aa26.7■■□□□ 1.87
HPS4-213ENST00000483631 U2SURPO15042 1029 aaKnown RBP26.69■■□□□ 1.86
HPS4-213ENST00000483631 GAS2L2Q8NHY3 880 aa26.69■■□□□ 1.86
HPS4-213ENST00000483631 YBX3P16989 372 aaKnown RBP eCLIP26.68■■□□□ 1.86
HPS4-213ENST00000483631 RFC4P35249 363 aa26.68■■□□□ 1.86
HPS4-213ENST00000483631 CRKLP46109 303 aaKnown RBP26.68■■□□□ 1.86
HPS4-213ENST00000483631 MMP10P09238 476 aa26.67■■□□□ 1.86
HPS4-213ENST00000483631 GOLGB1Q14789 3259 aaKnown RBP26.66■■□□□ 1.86
HPS4-213ENST00000483631 UBR2Q8IWV8 1755 aa26.66■■□□□ 1.86
HPS4-213ENST00000483631 KCPQ6ZWJ8 1503 aa26.65■■□□□ 1.86
HPS4-213ENST00000483631 GYS1P13807 737 aa26.65■■□□□ 1.86
HPS4-213ENST00000483631 CNGB1Q14028 1251 aaPredicted RBP26.65■■□□□ 1.86
HPS4-213ENST00000483631 VSIG10Q8N0Z9 540 aa26.65■■□□□ 1.86
HPS4-213ENST00000483631 NUDCQ9Y266 331 aa26.64■■□□□ 1.86
HPS4-213ENST00000483631 GNAT3A8MTJ3 354 aa26.63■■□□□ 1.85
HPS4-213ENST00000483631 SIPA1L3O60292 1781 aaPredicted RBP26.62■■□□□ 1.85
HPS4-213ENST00000483631 PPP2R1AP30153 589 aa26.62■■□□□ 1.85
HPS4-213ENST00000483631 INTS5Q6P9B9 1019 aaKnown RBP26.62■■□□□ 1.85
HPS4-213ENST00000483631 TGFB2P61812 414 aa26.61■■□□□ 1.85
HPS4-213ENST00000483631 DNAJC10Q8IXB1 793 aa26.61■■□□□ 1.85
HPS4-213ENST00000483631 CCDC87Q9NVE4 849 aa26.61■■□□□ 1.85
HPS4-213ENST00000483631 C10orf71Q711Q0 1435 aa26.61■■□□□ 1.85
HPS4-213ENST00000483631 USP42Q9H9J4 1324 aaKnown RBP26.61■■□□□ 1.85
HPS4-213ENST00000483631 SLC39A6Q13433 755 aa26.6■■□□□ 1.85
HPS4-213ENST00000483631 RSPH6AQ9H0K4 717 aa26.6■■□□□ 1.85
HPS4-213ENST00000483631 CYP19A1P11511 503 aaPredicted RBP26.59■■□□□ 1.85
HPS4-213ENST00000483631 KIAA1551Q9HCM1 1747 aa26.59■■□□□ 1.85
HPS4-213ENST00000483631 TEFQ10587 303 aa26.58■■□□□ 1.85
HPS4-213ENST00000483631 IL17REQ8NFR9 667 aa26.58■■□□□ 1.85
HPS4-213ENST00000483631 PARP3Q9Y6F1 533 aa26.58■■□□□ 1.85
HPS4-213ENST00000483631 SOS1Q07889 1333 aaPredicted RBP26.58■■□□□ 1.85
HPS4-213ENST00000483631 CEMIPQ8WUJ3 1361 aa26.58■■□□□ 1.84
HPS4-213ENST00000483631 PRKAR2BP31323 418 aa26.57■■□□□ 1.84
HPS4-213ENST00000483631 TTC5Q8N0Z6 440 aa26.57■■□□□ 1.84
HPS4-213ENST00000483631 PXDNLA1KZ92 1463 aa26.56■■□□□ 1.84
HPS4-213ENST00000483631 FCHSD2O94868 740 aa26.56■■□□□ 1.84
HPS4-213ENST00000483631 PHACTR3Q96KR7 559 aa26.54■■□□□ 1.84
HPS4-213ENST00000483631 ZPR1O75312 459 aa26.53■■□□□ 1.84
HPS4-213ENST00000483631 U2AF1L5P0DN76 240 aaPredicted RBP26.53■■□□□ 1.84
HPS4-213ENST00000483631 U2AF1Q01081 240 aaKnown RBP eCLIP26.53■■□□□ 1.84
HPS4-213ENST00000483631 ZNF790Q6PG37 636 aa26.53■■□□□ 1.84
HPS4-213ENST00000483631 TEX13AQ9BXU3 409 aaPredicted RBP26.53■■□□□ 1.84
HPS4-213ENST00000483631 SRP68Q9UHB9 627 aaKnown RBP26.53■■□□□ 1.84
HPS4-213ENST00000483631 N4BP2Q86UW6 1770 aaPredicted RBP26.53■■□□□ 1.84
HPS4-213ENST00000483631 STARD3NLO95772 234 aa26.52■■□□□ 1.84
HPS4-213ENST00000483631 BRCA1P38398 1863 aaKnown RBP26.52■■□□□ 1.84
HPS4-213ENST00000483631 FKBP8Q14318 412 aa26.52■■□□□ 1.84
HPS4-213ENST00000483631 COL15A1P39059 1388 aa26.51■■□□□ 1.83
HPS4-213ENST00000483631 HEG1Q9ULI3 1381 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms