RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 U2AF1Q01081 240 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTPN18-212ENST00000483617 PIGBQ92521 554 aa15.01□□□□□ -0.01
PTPN18-212ENST00000483617 MAP3K5Q99683 1374 aa15□□□□□ -0.01
PTPN18-212ENST00000483617 SYT17Q9BSW7 474 aa15□□□□□ -0.01
PTPN18-212ENST00000483617 TMOD3Q9NYL9 352 aa15□□□□□ -0.01
PTPN18-212ENST00000483617 C4BP0C0L5 1744 aa15□□□□□ -0.01
PTPN18-212ENST00000483617 POLD1P28340 1107 aa14.99□□□□□ -0.01
PTPN18-212ENST00000483617 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
PTPN18-212ENST00000483617 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
PTPN18-212ENST00000483617 AEBP1Q8IUX7 1158 aa14.98□□□□□ -0.01
PTPN18-212ENST00000483617 KDRP35968 1356 aa14.98□□□□□ -0.01
PTPN18-212ENST00000483617 MSH5O43196 834 aa14.97□□□□□ -0.01
PTPN18-212ENST00000483617 IL13P35225 146 aa14.97□□□□□ -0.01
PTPN18-212ENST00000483617 AMOTQ4VCS5 1084 aa14.97□□□□□ -0.01
PTPN18-212ENST00000483617 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
PTPN18-212ENST00000483617 COL23A1Q86Y22 540 aaPredicted RBP14.97□□□□□ -0.01
PTPN18-212ENST00000483617 LOC102724428A0A0B4J2F2 783 aa14.96□□□□□ -0.01
PTPN18-212ENST00000483617 KDM6AO15550 1401 aaPredicted RBP14.96□□□□□ -0.01
PTPN18-212ENST00000483617 HSP90AB1P08238 724 aaKnown RBP14.96□□□□□ -0.01
PTPN18-212ENST00000483617 SIK1P57059 783 aa14.96□□□□□ -0.01
PTPN18-212ENST00000483617 SULT6B1Q6IMI4 303 aa14.96□□□□□ -0.01
PTPN18-212ENST00000483617 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
PTPN18-212ENST00000483617 AK7Q96M32 723 aa14.96□□□□□ -0.01
PTPN18-212ENST00000483617 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
PTPN18-212ENST00000483617 UTRNP46939 3433 aa14.96□□□□□ -0.01
PTPN18-212ENST00000483617 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
PTPN18-212ENST00000483617 MAPK8IP3Q9UPT6 1336 aa14.95□□□□□ -0.02
PTPN18-212ENST00000483617 YY1P25490 414 aa14.95□□□□□ -0.02
PTPN18-212ENST00000483617 ZNF530Q6P9A1 599 aaPredicted RBP14.95□□□□□ -0.02
PTPN18-212ENST00000483617 FLAD1Q8NFF5 587 aa14.95□□□□□ -0.02
PTPN18-212ENST00000483617 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
PTPN18-212ENST00000483617 UBR3Q6ZT12 1888 aa14.95□□□□□ -0.02
PTPN18-212ENST00000483617 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
PTPN18-212ENST00000483617 FCHSD2O94868 740 aa14.94□□□□□ -0.02
PTPN18-212ENST00000483617 ATG3Q9NT62 314 aa14.94□□□□□ -0.02
PTPN18-212ENST00000483617 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
PTPN18-212ENST00000483617 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
PTPN18-212ENST00000483617 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
PTPN18-212ENST00000483617 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
PTPN18-212ENST00000483617 ITPK1Q13572 414 aa14.92□□□□□ -0.02
PTPN18-212ENST00000483617 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
PTPN18-212ENST00000483617 AMIGO3Q86WK7 504 aa14.92□□□□□ -0.02
PTPN18-212ENST00000483617 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
PTPN18-212ENST00000483617 ZNF831Q5JPB2 1677 aa14.92□□□□□ -0.02
PTPN18-212ENST00000483617 PHF14O94880 888 aa14.91□□□□□ -0.02
PTPN18-212ENST00000483617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.9□□□□□ -0.02
PTPN18-212ENST00000483617 APAF1O14727 1248 aa14.9□□□□□ -0.02
PTPN18-212ENST00000483617 SSFA2P28290 1259 aa14.9□□□□□ -0.02
PTPN18-212ENST00000483617 CABP4P57796 275 aa14.9□□□□□ -0.02
PTPN18-212ENST00000483617 GNPATO15228 680 aa14.89□□□□□ -0.03
PTPN18-212ENST00000483617 SALL2Q9Y467 1007 aaPredicted RBP14.89□□□□□ -0.03
PTPN18-212ENST00000483617 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
PTPN18-212ENST00000483617 SCN11AQ9UI33 1791 aa14.88□□□□□ -0.03
PTPN18-212ENST00000483617 HMOX1P09601 288 aa14.88□□□□□ -0.03
PTPN18-212ENST00000483617 SMIM5Q71RC9 77 aa14.88□□□□□ -0.03
PTPN18-212ENST00000483617 NLGN2Q8NFZ4 835 aa14.88□□□□□ -0.03
PTPN18-212ENST00000483617 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
PTPN18-212ENST00000483617 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
PTPN18-212ENST00000483617 AKAP4Q5JQC9 854 aa14.87□□□□□ -0.03
PTPN18-212ENST00000483617 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
PTPN18-212ENST00000483617 MRC1P22897 1456 aa14.87□□□□□ -0.03
PTPN18-212ENST00000483617 CICQ96RK0 1608 aaPredicted RBP14.86□□□□□ -0.03
PTPN18-212ENST00000483617 GOLGB1Q14789 3259 aaKnown RBP14.86□□□□□ -0.03
PTPN18-212ENST00000483617 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
PTPN18-212ENST00000483617 GPR162Q16538 588 aa14.86□□□□□ -0.03
PTPN18-212ENST00000483617 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
PTPN18-212ENST00000483617 CNTNAP4Q9C0A0 1308 aa14.86□□□□□ -0.03
PTPN18-212ENST00000483617 NFATC2IPQ8NCF5 419 aa14.85□□□□□ -0.03
PTPN18-212ENST00000483617 ADAMTS7Q9UKP4 1686 aa14.84□□□□□ -0.03
PTPN18-212ENST00000483617 CHD4Q14839 1912 aa14.84□□□□□ -0.03
PTPN18-212ENST00000483617 TJP1Q07157 1748 aa14.84□□□□□ -0.03
PTPN18-212ENST00000483617 LMOD3Q0VAK6 560 aa14.84□□□□□ -0.03
PTPN18-212ENST00000483617 NEUROD2Q15784 382 aa14.84□□□□□ -0.03
PTPN18-212ENST00000483617 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
PTPN18-212ENST00000483617 RTCBQ9Y3I0 505 aaKnown RBP14.84□□□□□ -0.03
PTPN18-212ENST00000483617 CD2APQ9Y5K6 639 aa14.84□□□□□ -0.03
PTPN18-212ENST00000483617 VIRMAQ69YN4 1812 aaKnown RBP14.83□□□□□ -0.04
PTPN18-212ENST00000483617 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.04
PTPN18-212ENST00000483617 PTCD1O75127 700 aaKnown RBP14.83□□□□□ -0.04
PTPN18-212ENST00000483617 GOLGA2Q08379 1002 aa14.83□□□□□ -0.04
PTPN18-212ENST00000483617 MTHFSDQ2M296 383 aaKnown RBP14.83□□□□□ -0.04
PTPN18-212ENST00000483617 RC3H1Q5TC82 1133 aaKnown RBP14.83□□□□□ -0.04
PTPN18-212ENST00000483617 PLEKHF1Q96S99 279 aa14.83□□□□□ -0.04
PTPN18-212ENST00000483617 ADRA2BP18089 450 aa14.82□□□□□ -0.04
PTPN18-212ENST00000483617 TMPOP42166 694 aaKnown RBP14.82□□□□□ -0.04
PTPN18-212ENST00000483617 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
PTPN18-212ENST00000483617 CCDC27Q2M243 656 aa14.82□□□□□ -0.04
PTPN18-212ENST00000483617 TRAPPC3LQ5T215 181 aa14.82□□□□□ -0.04
PTPN18-212ENST00000483617 SLC52A2Q9HAB3 445 aa14.82□□□□□ -0.04
PTPN18-212ENST00000483617 C4AP0C0L4 1744 aa14.82□□□□□ -0.04
PTPN18-212ENST00000483617 RNMTO43148 476 aaKnown RBP14.81□□□□□ -0.04
PTPN18-212ENST00000483617 RIPK4P57078 832 aa14.81□□□□□ -0.04
PTPN18-212ENST00000483617 NFE2L2Q16236 605 aa14.81□□□□□ -0.04
PTPN18-212ENST00000483617 LGR6Q9HBX8 967 aa14.81□□□□□ -0.04
PTPN18-212ENST00000483617 MYH14Q7Z406 1995 aaKnown RBP14.8□□□□□ -0.04
PTPN18-212ENST00000483617 RPS6KA4O75676 772 aa14.8□□□□□ -0.04
PTPN18-212ENST00000483617 YBX3P16989 372 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTPN18-212ENST00000483617 WDR63Q8IWG1 891 aa14.8□□□□□ -0.04
PTPN18-212ENST00000483617 RRP7AQ9Y3A4 280 aaKnown RBP14.8□□□□□ -0.04
PTPN18-212ENST00000483617 E9PSI1 815 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms