RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 PTGER2P43116 358 aa23.32■■□□□ 1.32
RTCA-204ENST00000483474 RBM42Q9BTD8 480 aaKnown RBP23.32■■□□□ 1.32
RTCA-204ENST00000483474 C4BP0C0L5 1744 aa23.32■■□□□ 1.32
RTCA-204ENST00000483474 KDM6AO15550 1401 aaPredicted RBP23.31■■□□□ 1.32
RTCA-204ENST00000483474 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
RTCA-204ENST00000483474 ARXQ96QS3 562 aa23.3■■□□□ 1.32
RTCA-204ENST00000483474 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
RTCA-204ENST00000483474 ZEB1P37275 1124 aaPredicted RBP23.29■■□□□ 1.32
RTCA-204ENST00000483474 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
RTCA-204ENST00000483474 COL23A1Q86Y22 540 aaPredicted RBP23.28■■□□□ 1.32
RTCA-204ENST00000483474 GAS2L2Q8NHY3 880 aa23.28■■□□□ 1.32
RTCA-204ENST00000483474 RNMTO43148 476 aaKnown RBP23.26■■□□□ 1.31
RTCA-204ENST00000483474 U2AF1L5P0DN76 240 aaPredicted RBP23.26■■□□□ 1.31
RTCA-204ENST00000483474 U2AF1Q01081 240 aaKnown RBP eCLIP23.26■■□□□ 1.31
RTCA-204ENST00000483474 UBR3Q6ZT12 1888 aa23.26■■□□□ 1.31
RTCA-204ENST00000483474 ZNF831Q5JPB2 1677 aa23.25■■□□□ 1.31
RTCA-204ENST00000483474 NEFMP07197 916 aa23.25■■□□□ 1.31
RTCA-204ENST00000483474 LINC00116Q8NCU8 138 aa23.25■■□□□ 1.31
RTCA-204ENST00000483474 SGIP1Q9BQI5 828 aa23.25■■□□□ 1.31
RTCA-204ENST00000483474 SLC52A2Q9HAB3 445 aa23.25■■□□□ 1.31
RTCA-204ENST00000483474 GNPATO15228 680 aa23.24■■□□□ 1.31
RTCA-204ENST00000483474 PTCD1O75127 700 aaKnown RBP23.24■■□□□ 1.31
RTCA-204ENST00000483474 PHF14O94880 888 aa23.24■■□□□ 1.31
RTCA-204ENST00000483474 SSFA2P28290 1259 aa23.24■■□□□ 1.31
RTCA-204ENST00000483474 FHDC1Q9C0D6 1143 aaPredicted RBP23.24■■□□□ 1.31
RTCA-204ENST00000483474 GNAT3A8MTJ3 354 aa23.23■■□□□ 1.31
RTCA-204ENST00000483474 DDX10Q13206 875 aaKnown RBP23.23■■□□□ 1.31
RTCA-204ENST00000483474 ITPK1Q13572 414 aa23.23■■□□□ 1.31
RTCA-204ENST00000483474 LGR6Q9HBX8 967 aa23.23■■□□□ 1.31
RTCA-204ENST00000483474 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.22■■□□□ 1.31
RTCA-204ENST00000483474 FCHSD2O94868 740 aa23.22■■□□□ 1.31
RTCA-204ENST00000483474 PRKAR2BP31323 418 aa23.22■■□□□ 1.31
RTCA-204ENST00000483474 KLHL34Q8N239 644 aa23.22■■□□□ 1.31
RTCA-204ENST00000483474 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
RTCA-204ENST00000483474 COL24A1Q17RW2 1714 aa23.22■■□□□ 1.31
RTCA-204ENST00000483474 RTCBQ9Y3I0 505 aaKnown RBP23.21■■□□□ 1.31
RTCA-204ENST00000483474 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
RTCA-204ENST00000483474 TEFQ10587 303 aa23.2■■□□□ 1.3
RTCA-204ENST00000483474 RALBP1Q15311 655 aa23.2■■□□□ 1.3
RTCA-204ENST00000483474 RC3H1Q5TC82 1133 aaKnown RBP23.2■■□□□ 1.3
RTCA-204ENST00000483474 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
RTCA-204ENST00000483474 TRAPPC3LQ5T215 181 aa23.18■■□□□ 1.3
RTCA-204ENST00000483474 MSL1Q68DK7 614 aa23.18■■□□□ 1.3
RTCA-204ENST00000483474 TTC5Q8N0Z6 440 aa23.18■■□□□ 1.3
RTCA-204ENST00000483474 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
RTCA-204ENST00000483474 COL5A3P25940 1745 aaPredicted RBP23.17■■□□□ 1.3
RTCA-204ENST00000483474 RTF1Q92541 710 aaKnown RBP23.17■■□□□ 1.3
RTCA-204ENST00000483474 CNTNAP4Q9C0A0 1308 aa23.16■■□□□ 1.3
RTCA-204ENST00000483474 ADRA2BP18089 450 aa23.16■■□□□ 1.3
RTCA-204ENST00000483474 SLC4A9Q96Q91 983 aa23.16■■□□□ 1.3
RTCA-204ENST00000483474 MRC1P22897 1456 aa23.16■■□□□ 1.3
RTCA-204ENST00000483474 ADAMTS7Q9UKP4 1686 aa23.16■■□□□ 1.3
RTCA-204ENST00000483474 RPS6KA4O75676 772 aa23.14■■□□□ 1.29
RTCA-204ENST00000483474 RFC4P35249 363 aa23.14■■□□□ 1.29
RTCA-204ENST00000483474 PHACTR3Q96KR7 559 aa23.14■■□□□ 1.29
RTCA-204ENST00000483474 MYH14Q7Z406 1995 aaKnown RBP23.13■■□□□ 1.29
RTCA-204ENST00000483474 SLC39A6Q13433 755 aa23.13■■□□□ 1.29
RTCA-204ENST00000483474 CRKLP46109 303 aaKnown RBP23.12■■□□□ 1.29
RTCA-204ENST00000483474 SMIM5Q71RC9 77 aa23.11■■□□□ 1.29
RTCA-204ENST00000483474 AMIGO3Q86WK7 504 aa23.11■■□□□ 1.29
RTCA-204ENST00000483474 IL17REQ8NFR9 667 aa23.11■■□□□ 1.29
RTCA-204ENST00000483474 VSIG10Q8N0Z9 540 aa23.1■■□□□ 1.29
RTCA-204ENST00000483474 CICQ96RK0 1608 aaPredicted RBP23.1■■□□□ 1.29
RTCA-204ENST00000483474 TJP1Q07157 1748 aa23.09■■□□□ 1.29
RTCA-204ENST00000483474 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
RTCA-204ENST00000483474 NLGN1Q8N2Q7 840 aa23.09■■□□□ 1.29
RTCA-204ENST00000483474 ARHGEF1Q92888 912 aaKnown RBP23.09■■□□□ 1.29
RTCA-204ENST00000483474 GPR162Q16538 588 aa23.08■■□□□ 1.29
RTCA-204ENST00000483474 DNAJC10Q8IXB1 793 aa23.08■■□□□ 1.29
RTCA-204ENST00000483474 CCDC87Q9NVE4 849 aa23.08■■□□□ 1.29
RTCA-204ENST00000483474 MYBBP1AQ9BQG0 1328 aaKnown RBP23.08■■□□□ 1.28
RTCA-204ENST00000483474 MAPK8IP3Q9UPT6 1336 aa23.08■■□□□ 1.28
RTCA-204ENST00000483474 SIPA1L3O60292 1781 aaPredicted RBP23.07■■□□□ 1.28
RTCA-204ENST00000483474 BTBD11A6QL63 1104 aa23.07■■□□□ 1.28
RTCA-204ENST00000483474 STARD3NLO95772 234 aa23.07■■□□□ 1.28
RTCA-204ENST00000483474 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
RTCA-204ENST00000483474 TEX13AQ9BXU3 409 aaPredicted RBP23.07■■□□□ 1.28
RTCA-204ENST00000483474 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
RTCA-204ENST00000483474 PELP1Q8IZL8 1130 aaKnown RBP23.06■■□□□ 1.28
RTCA-204ENST00000483474 UBR2Q8IWV8 1755 aa23.06■■□□□ 1.28
RTCA-204ENST00000483474 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
RTCA-204ENST00000483474 FMNL2Q96PY5 1086 aa23.05■■□□□ 1.28
RTCA-204ENST00000483474 CHD4Q14839 1912 aa23.04■■□□□ 1.28
RTCA-204ENST00000483474 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
RTCA-204ENST00000483474 ZPR1O75312 459 aa23.04■■□□□ 1.28
RTCA-204ENST00000483474 CYP19A1P11511 503 aaPredicted RBP23.04■■□□□ 1.28
RTCA-204ENST00000483474 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
RTCA-204ENST00000483474 YY1P25490 414 aa23.03■■□□□ 1.28
RTCA-204ENST00000483474 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
RTCA-204ENST00000483474 C4AP0C0L4 1744 aa23.02■■□□□ 1.28
RTCA-204ENST00000483474 MMP10P09238 476 aa23.02■■□□□ 1.28
RTCA-204ENST00000483474 INTS5Q6P9B9 1019 aaKnown RBP23.02■■□□□ 1.28
RTCA-204ENST00000483474 MCM10Q7L590 875 aa23.02■■□□□ 1.28
RTCA-204ENST00000483474 PARP3Q9Y6F1 533 aa23.02■■□□□ 1.28
RTCA-204ENST00000483474 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
RTCA-204ENST00000483474 ZNF496Q96IT1 587 aaPredicted RBP23.01■■□□□ 1.27
RTCA-204ENST00000483474 HEG1Q9ULI3 1381 aa23.01■■□□□ 1.27
RTCA-204ENST00000483474 GYS1P13807 737 aa23■■□□□ 1.27
RTCA-204ENST00000483474 WDR43Q15061 677 aaKnown RBP eCLIP22.99■■□□□ 1.27
RTCA-204ENST00000483474 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms