RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 U2AF1Q01081 240 aaKnown RBP eCLIP6.09□□□□□ -1.43
HDAC9-224ENST00000483142 CCDC27Q2M243 656 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 AMOTQ4VCS5 1084 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 MEX3CQ5U5Q3 659 aaKnown RBP6.09□□□□□ -1.43
HDAC9-224ENST00000483142 SULT6B1Q6IMI4 303 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 TOM1L2Q6ZVM7 507 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 GAS2L2Q8NHY3 880 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 RUNDC1Q96C34 613 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 NGLY1Q96IV0 654 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 GJD4Q96KN9 370 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-224ENST00000483142 TAOK2Q9UL54 1235 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 ADAMTS8Q9UP79 889 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 C5P01031 1676 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 ZBTB7CA1YPR0 619 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 STK25O00506 426 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 U2SURPO15042 1029 aaKnown RBP6.08□□□□□ -1.44
HDAC9-224ENST00000483142 CSB-PGBD3P0DP91 1061 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 PRKCSHP14314 528 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-224ENST00000483142 TATP17735 454 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-224ENST00000483142 RBM6P78332 1123 aaKnown RBP6.08□□□□□ -1.44
HDAC9-224ENST00000483142 CNGB1Q14028 1251 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-224ENST00000483142 USHBP1Q8N6Y0 703 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 RAPGEF4Q8WZA2 1011 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 PNNQ9H307 717 aaKnown RBP6.08□□□□□ -1.44
HDAC9-224ENST00000483142 STRN4Q9NRL3 753 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 NLRP2Q9NX02 1062 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 KCPQ6ZWJ8 1503 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 BTAF1O14981 1849 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 TJP1Q07157 1748 aa6.08□□□□□ -1.44
HDAC9-224ENST00000483142 ZBED9Q6R2W3 1325 aa6.07□□□□□ -1.44
HDAC9-224ENST00000483142 MAPK8IP3Q9UPT6 1336 aa6.07□□□□□ -1.44
HDAC9-224ENST00000483142 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
HDAC9-224ENST00000483142 HMOX1P09601 288 aa6.07□□□□□ -1.44
HDAC9-224ENST00000483142 NFE2L2Q16236 605 aa6.07□□□□□ -1.44
HDAC9-224ENST00000483142 LTV1Q96GA3 475 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-224ENST00000483142 BCL11BQ9C0K0 894 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-224ENST00000483142 COL5A3P25940 1745 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-224ENST00000483142 CYP27B1O15528 508 aa6.06□□□□□ -1.44
HDAC9-224ENST00000483142 PHKG2P15735 406 aa6.06□□□□□ -1.44
HDAC9-224ENST00000483142 TMPOP42166 694 aaKnown RBP6.06□□□□□ -1.44
HDAC9-224ENST00000483142 EVA1CP58658 441 aa6.06□□□□□ -1.44
HDAC9-224ENST00000483142 LMOD3Q0VAK6 560 aa6.06□□□□□ -1.44
HDAC9-224ENST00000483142 MTHFSDQ2M296 383 aaKnown RBP6.06□□□□□ -1.44
HDAC9-224ENST00000483142 AKAP4Q5JQC9 854 aa6.06□□□□□ -1.44
HDAC9-224ENST00000483142 PHACTR3Q96KR7 559 aa6.06□□□□□ -1.44
HDAC9-224ENST00000483142 SPG7Q9UQ90 795 aa6.06□□□□□ -1.44
HDAC9-224ENST00000483142 IL16Q14005 1332 aa6.05□□□□□ -1.44
HDAC9-224ENST00000483142 PLEKHO1Q53GL0 409 aaPredicted RBP6.05□□□□□ -1.44
HDAC9-224ENST00000483142 ZNF530Q6P9A1 599 aaPredicted RBP6.05□□□□□ -1.44
HDAC9-224ENST00000483142 POTEAQ6S8J7 498 aa6.05□□□□□ -1.44
HDAC9-224ENST00000483142 IFNL2Q8IZJ0 200 aa6.05□□□□□ -1.44
HDAC9-224ENST00000483142 TRIM35Q9UPQ4 493 aa6.05□□□□□ -1.44
HDAC9-224ENST00000483142 N4BP2Q86UW6 1770 aaPredicted RBP6.05□□□□□ -1.44
HDAC9-224ENST00000483142 QSER1Q2KHR3 1735 aa6.05□□□□□ -1.44
HDAC9-224ENST00000483142 TAF1LQ8IZX4 1826 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 APAF1O14727 1248 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 HSP90AB1P08238 724 aaKnown RBP6.04□□□□□ -1.44
HDAC9-224ENST00000483142 DDB1Q16531 1140 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
HDAC9-224ENST00000483142 CCDC146Q8IYE0 955 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 FAM9BQ8IZU0 186 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 ZCRB1Q8TBF4 217 aaKnown RBP6.04□□□□□ -1.44
HDAC9-224ENST00000483142 DCAF5Q96JK2 942 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 QTRT2Q9H974 415 aaKnown RBP6.04□□□□□ -1.44
HDAC9-224ENST00000483142 BABAM1Q9NWV8 329 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 NUP188Q5SRE5 1749 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 HEG1Q9ULI3 1381 aa6.04□□□□□ -1.44
HDAC9-224ENST00000483142 GNAT3A8MTJ3 354 aa6.03□□□□□ -1.44
HDAC9-224ENST00000483142 NEFMP07197 916 aa6.03□□□□□ -1.44
HDAC9-224ENST00000483142 ZNF853P0CG23 659 aa6.03□□□□□ -1.44
HDAC9-224ENST00000483142 PRKAR2AP13861 404 aaKnown RBP6.03□□□□□ -1.44
HDAC9-224ENST00000483142 SEPT12Q8IYM1 358 aa6.03□□□□□ -1.44
HDAC9-224ENST00000483142 MARCH10Q8NA82 808 aaPredicted RBP6.03□□□□□ -1.44
HDAC9-224ENST00000483142 STK24Q9Y6E0 443 aa6.03□□□□□ -1.44
HDAC9-224ENST00000483142 SCN7AQ01118 1682 aa6.03□□□□□ -1.44
HDAC9-224ENST00000483142 ERVV-2B6SEH9 535 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 EXOC5O00471 708 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 RNMTO43148 476 aaKnown RBP6.02□□□□□ -1.45
HDAC9-224ENST00000483142 RXRBP28702 533 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 CALD1Q05682 793 aaKnown RBP6.02□□□□□ -1.45
HDAC9-224ENST00000483142 PDE3BQ13370 1112 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 C1orf141Q5JVX7 400 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 WDR63Q8IWG1 891 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 WWC1Q8IX03 1113 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 PIP4P2Q8N4L2 257 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 TSPYL2Q9H2G4 693 aaPredicted RBP6.02□□□□□ -1.45
HDAC9-224ENST00000483142 USP35Q9P2H5 1018 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 PCDHB8Q9UN66 801 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 PCDHB13Q9Y5F0 798 aa6.02□□□□□ -1.45
HDAC9-224ENST00000483142 SOS1Q07889 1333 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-224ENST00000483142 BCORQ6W2J9 1755 aa6.01□□□□□ -1.45
HDAC9-224ENST00000483142 RIPK4P57078 832 aa6.01□□□□□ -1.45
HDAC9-224ENST00000483142 KRT27Q7Z3Y8 459 aa6.01□□□□□ -1.45
HDAC9-224ENST00000483142 TRMT2AQ8IZ69 625 aaKnown RBP6.01□□□□□ -1.45
HDAC9-224ENST00000483142 IL17REQ8NFR9 667 aa6.01□□□□□ -1.45
HDAC9-224ENST00000483142 SLC52A2Q9HAB3 445 aa6.01□□□□□ -1.45
HDAC9-224ENST00000483142 IFT57Q9NWB7 429 aa6.01□□□□□ -1.45
HDAC9-224ENST00000483142 CCDC9Q9Y3X0 531 aaKnown RBP6.01□□□□□ -1.45
HDAC9-224ENST00000483142 TUBGCP6Q96RT7 1819 aa6.01□□□□□ -1.45
HDAC9-224ENST00000483142 FANCIQ9NVI1 1328 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms