RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 AMOTQ4VCS5 1084 aa16.39■□□□□ 0.21
HDLBP-239ENST00000483086 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
HDLBP-239ENST00000483086 DCAF5Q96JK2 942 aa16.39■□□□□ 0.21
HDLBP-239ENST00000483086 SIPA1L3O60292 1781 aaPredicted RBP16.38■□□□□ 0.21
HDLBP-239ENST00000483086 CICQ96RK0 1608 aaPredicted RBP16.38■□□□□ 0.21
HDLBP-239ENST00000483086 MRC1P22897 1456 aa16.38■□□□□ 0.21
HDLBP-239ENST00000483086 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
HDLBP-239ENST00000483086 DIAPH1O60610 1272 aaKnown RBP16.38■□□□□ 0.21
HDLBP-239ENST00000483086 ARXQ96QS3 562 aa16.38■□□□□ 0.21
HDLBP-239ENST00000483086 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
HDLBP-239ENST00000483086 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
HDLBP-239ENST00000483086 C4AP0C0L4 1744 aa16.37■□□□□ 0.21
HDLBP-239ENST00000483086 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
HDLBP-239ENST00000483086 MSL1Q68DK7 614 aa16.37■□□□□ 0.21
HDLBP-239ENST00000483086 SLC16A10Q8TF71 515 aa16.36■□□□□ 0.21
HDLBP-239ENST00000483086 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
HDLBP-239ENST00000483086 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
HDLBP-239ENST00000483086 ATP6V1AP38606 617 aa16.35■□□□□ 0.21
HDLBP-239ENST00000483086 NFATC2IPQ8NCF5 419 aa16.35■□□□□ 0.21
HDLBP-239ENST00000483086 PHF14O94880 888 aa16.34■□□□□ 0.21
HDLBP-239ENST00000483086 HSP90AB1P08238 724 aaKnown RBP16.34■□□□□ 0.21
HDLBP-239ENST00000483086 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
HDLBP-239ENST00000483086 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
HDLBP-239ENST00000483086 KCPQ6ZWJ8 1503 aa16.34■□□□□ 0.21
HDLBP-239ENST00000483086 CABP4P57796 275 aa16.33■□□□□ 0.2
HDLBP-239ENST00000483086 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
HDLBP-239ENST00000483086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.32■□□□□ 0.2
HDLBP-239ENST00000483086 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
HDLBP-239ENST00000483086 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
HDLBP-239ENST00000483086 MSH5O43196 834 aa16.32■□□□□ 0.2
HDLBP-239ENST00000483086 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
HDLBP-239ENST00000483086 AK7Q96M32 723 aa16.32■□□□□ 0.2
HDLBP-239ENST00000483086 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
HDLBP-239ENST00000483086 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
HDLBP-239ENST00000483086 CHD4Q14839 1912 aa16.31■□□□□ 0.2
HDLBP-239ENST00000483086 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
HDLBP-239ENST00000483086 GNPATO15228 680 aa16.3■□□□□ 0.2
HDLBP-239ENST00000483086 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
HDLBP-239ENST00000483086 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
HDLBP-239ENST00000483086 SLC52A2Q9HAB3 445 aa16.3■□□□□ 0.2
HDLBP-239ENST00000483086 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
HDLBP-239ENST00000483086 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
HDLBP-239ENST00000483086 SSFA2P28290 1259 aa16.28■□□□□ 0.2
HDLBP-239ENST00000483086 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
HDLBP-239ENST00000483086 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.2
HDLBP-239ENST00000483086 POLD1P28340 1107 aa16.27■□□□□ 0.2
HDLBP-239ENST00000483086 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
HDLBP-239ENST00000483086 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
HDLBP-239ENST00000483086 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
HDLBP-239ENST00000483086 FLAD1Q8NFF5 587 aa16.26■□□□□ 0.19
HDLBP-239ENST00000483086 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
HDLBP-239ENST00000483086 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
HDLBP-239ENST00000483086 N4BP2Q86UW6 1770 aaPredicted RBP16.24■□□□□ 0.19
HDLBP-239ENST00000483086 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
HDLBP-239ENST00000483086 INTS5Q6P9B9 1019 aaKnown RBP16.24■□□□□ 0.19
HDLBP-239ENST00000483086 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
HDLBP-239ENST00000483086 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
HDLBP-239ENST00000483086 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
HDLBP-239ENST00000483086 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
HDLBP-239ENST00000483086 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.196e-10■□□□□ 10.9
HDLBP-239ENST00000483086 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDLBP-239ENST00000483086 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
HDLBP-239ENST00000483086 RTCBQ9Y3I0 505 aaKnown RBP16.22■□□□□ 0.19
HDLBP-239ENST00000483086 BRCA1P38398 1863 aaKnown RBP16.21■□□□□ 0.19
HDLBP-239ENST00000483086 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
HDLBP-239ENST00000483086 KCNQ3O43525 872 aa16.21■□□□□ 0.19
HDLBP-239ENST00000483086 GYS1P13807 737 aa16.21■□□□□ 0.19
HDLBP-239ENST00000483086 YY1P25490 414 aa16.21■□□□□ 0.19
HDLBP-239ENST00000483086 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
HDLBP-239ENST00000483086 SRP68Q9UHB9 627 aaKnown RBP16.21■□□□□ 0.19
HDLBP-239ENST00000483086 AFDNP55196 1824 aaKnown RBP16.2■□□□□ 0.18
HDLBP-239ENST00000483086 CYP19A1P11511 503 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-239ENST00000483086 TRAPPC3LQ5T215 181 aa16.2■□□□□ 0.18
HDLBP-239ENST00000483086 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
HDLBP-239ENST00000483086 MMP10P09238 476 aa16.19■□□□□ 0.18
HDLBP-239ENST00000483086 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
HDLBP-239ENST00000483086 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
HDLBP-239ENST00000483086 MCM10Q7L590 875 aa16.18■□□□□ 0.18
HDLBP-239ENST00000483086 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
HDLBP-239ENST00000483086 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
HDLBP-239ENST00000483086 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
HDLBP-239ENST00000483086 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
HDLBP-239ENST00000483086 FCHSD2O94868 740 aa16.17■□□□□ 0.18
HDLBP-239ENST00000483086 ADRA2BP18089 450 aa16.17■□□□□ 0.18
HDLBP-239ENST00000483086 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
HDLBP-239ENST00000483086 NUDCQ9Y266 331 aa16.17■□□□□ 0.18
HDLBP-239ENST00000483086 CD2APQ9Y5K6 639 aa16.17■□□□□ 0.18
HDLBP-239ENST00000483086 KDM3BQ7LBC6 1761 aa16.17■□□□□ 0.18
HDLBP-239ENST00000483086 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
HDLBP-239ENST00000483086 FKBP8Q14318 412 aa16.16■□□□□ 0.18
HDLBP-239ENST00000483086 ZNF790Q6PG37 636 aa16.16■□□□□ 0.18
HDLBP-239ENST00000483086 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
HDLBP-239ENST00000483086 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
HDLBP-239ENST00000483086 C10orf71Q711Q0 1435 aa16.16■□□□□ 0.18
HDLBP-239ENST00000483086 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
HDLBP-239ENST00000483086 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
HDLBP-239ENST00000483086 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
HDLBP-239ENST00000483086 SCN7AQ01118 1682 aa16.15■□□□□ 0.18
HDLBP-239ENST00000483086 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
HDLBP-239ENST00000483086 DDR1Q08345 913 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms