RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
ZKSCAN1-204ENST00000482979 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
ZKSCAN1-204ENST00000482979 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
ZKSCAN1-204ENST00000482979 SPG7Q9UQ90 795 aa17.78■□□□□ 0.44
ZKSCAN1-204ENST00000482979 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.44
ZKSCAN1-204ENST00000482979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.431e-8■□□□□ 8.1
ZKSCAN1-204ENST00000482979 PHKG2P15735 406 aa17.75■□□□□ 0.43
ZKSCAN1-204ENST00000482979 GPR162Q16538 588 aa17.75■□□□□ 0.43
ZKSCAN1-204ENST00000482979 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
ZKSCAN1-204ENST00000482979 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
ZKSCAN1-204ENST00000482979 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
ZKSCAN1-204ENST00000482979 UBR3Q6ZT12 1888 aa17.75■□□□□ 0.43
ZKSCAN1-204ENST00000482979 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
ZKSCAN1-204ENST00000482979 HMOX1P09601 288 aa17.73■□□□□ 0.43
ZKSCAN1-204ENST00000482979 IFNL2Q8IZJ0 200 aa17.73■□□□□ 0.43
ZKSCAN1-204ENST00000482979 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 LINC00116Q8NCU8 138 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 ASAP1Q9ULH1 1129 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 GOLGB1Q14789 3259 aaKnown RBP17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 LOC102724428A0A0B4J2F2 783 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 SIK1P57059 783 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 AK7Q96M32 723 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 TMOD3Q9NYL9 352 aa17.72■□□□□ 0.43
ZKSCAN1-204ENST00000482979 YBX3P16989 372 aaKnown RBP eCLIP17.71■□□□□ 0.431e-8■■■□□ 17.7
ZKSCAN1-204ENST00000482979 ITPK1Q13572 414 aa17.71■□□□□ 0.43
ZKSCAN1-204ENST00000482979 SULT6B1Q6IMI4 303 aa17.71■□□□□ 0.43
ZKSCAN1-204ENST00000482979 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
ZKSCAN1-204ENST00000482979 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
ZKSCAN1-204ENST00000482979 PHF14O94880 888 aa17.7■□□□□ 0.42
ZKSCAN1-204ENST00000482979 ATG3Q9NT62 314 aa17.7■□□□□ 0.42
ZKSCAN1-204ENST00000482979 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
ZKSCAN1-204ENST00000482979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
ZKSCAN1-204ENST00000482979 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
ZKSCAN1-204ENST00000482979 HMGB2P26583 209 aaKnown RBP17.68■□□□□ 0.42
ZKSCAN1-204ENST00000482979 RSPH6AQ9H0K4 717 aa17.68■□□□□ 0.42
ZKSCAN1-204ENST00000482979 KDRP35968 1356 aa17.67■□□□□ 0.42
ZKSCAN1-204ENST00000482979 PRKAR2BP31323 418 aa17.67■□□□□ 0.42
ZKSCAN1-204ENST00000482979 ATP6V1AP38606 617 aa17.67■□□□□ 0.42
ZKSCAN1-204ENST00000482979 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
ZKSCAN1-204ENST00000482979 FCHSD2O94868 740 aa17.66■□□□□ 0.42
ZKSCAN1-204ENST00000482979 SSFA2P28290 1259 aa17.66■□□□□ 0.42
ZKSCAN1-204ENST00000482979 SLC4A9Q96Q91 983 aa17.66■□□□□ 0.42
ZKSCAN1-204ENST00000482979 MAPK8IP3Q9UPT6 1336 aa17.66■□□□□ 0.42
ZKSCAN1-204ENST00000482979 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
ZKSCAN1-204ENST00000482979 CD2APQ9Y5K6 639 aa17.65■□□□□ 0.42
ZKSCAN1-204ENST00000482979 GNPATO15228 680 aa17.64■□□□□ 0.42
ZKSCAN1-204ENST00000482979 PLEKHO1Q53GL0 409 aaPredicted RBP17.64■□□□□ 0.42
ZKSCAN1-204ENST00000482979 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.42
ZKSCAN1-204ENST00000482979 ERVV-2B6SEH9 535 aa17.64■□□□□ 0.41
ZKSCAN1-204ENST00000482979 NEFMP07197 916 aa17.64■□□□□ 0.41
ZKSCAN1-204ENST00000482979 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
ZKSCAN1-204ENST00000482979 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
ZKSCAN1-204ENST00000482979 HNRNPUQ00839 825 aaKnown RBP eCLIP17.63■□□□□ 0.41
ZKSCAN1-204ENST00000482979 PLEKHF1Q96S99 279 aa17.63■□□□□ 0.41
ZKSCAN1-204ENST00000482979 ZNF831Q5JPB2 1677 aa17.63■□□□□ 0.41
ZKSCAN1-204ENST00000482979 DLG5Q8TDM6 1919 aa17.62■□□□□ 0.41
ZKSCAN1-204ENST00000482979 COL5A3P25940 1745 aaPredicted RBP17.62■□□□□ 0.41
ZKSCAN1-204ENST00000482979 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
ZKSCAN1-204ENST00000482979 APAF1O14727 1248 aa17.61■□□□□ 0.41
ZKSCAN1-204ENST00000482979 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
ZKSCAN1-204ENST00000482979 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
ZKSCAN1-204ENST00000482979 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
ZKSCAN1-204ENST00000482979 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
ZKSCAN1-204ENST00000482979 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
ZKSCAN1-204ENST00000482979 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
ZKSCAN1-204ENST00000482979 CABP4P57796 275 aa17.58■□□□□ 0.41
ZKSCAN1-204ENST00000482979 NEUROD2Q15784 382 aa17.58■□□□□ 0.41
ZKSCAN1-204ENST00000482979 WWC3Q9ULE0 1092 aa17.58■□□□□ 0.41
ZKSCAN1-204ENST00000482979 MYH14Q7Z406 1995 aaKnown RBP17.58■□□□□ 0.4
ZKSCAN1-204ENST00000482979 C1QTNF8P60827 252 aa17.57■□□□□ 0.4
ZKSCAN1-204ENST00000482979 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
ZKSCAN1-204ENST00000482979 CNTNAP4Q9C0A0 1308 aa17.56■□□□□ 0.4
ZKSCAN1-204ENST00000482979 MMP10P09238 476 aa17.56■□□□□ 0.4
ZKSCAN1-204ENST00000482979 C1orf141Q5JVX7 400 aa17.56■□□□□ 0.4
ZKSCAN1-204ENST00000482979 NFATC2IPQ8NCF5 419 aa17.56■□□□□ 0.4
ZKSCAN1-204ENST00000482979 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
ZKSCAN1-204ENST00000482979 KIAA1551Q9HCM1 1747 aa17.56■□□□□ 0.4
ZKSCAN1-204ENST00000482979 TMPOP42166 694 aaKnown RBP17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 NFE2L2Q16236 605 aa17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 RC3H1Q5TC82 1133 aaKnown RBP17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 ARHGEF1Q92888 912 aaKnown RBP17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 KIF13BQ9NQT8 1826 aa17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 TJP1Q07157 1748 aa17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 MTHFSDQ2M296 383 aaKnown RBP17.55■□□□□ 0.4
ZKSCAN1-204ENST00000482979 RPS6KA4O75676 772 aa17.54■□□□□ 0.4
ZKSCAN1-204ENST00000482979 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
ZKSCAN1-204ENST00000482979 ATP10DQ9P241 1426 aa17.53■□□□□ 0.4
ZKSCAN1-204ENST00000482979 ADCY9O60503 1353 aa17.53■□□□□ 0.4
ZKSCAN1-204ENST00000482979 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
ZKSCAN1-204ENST00000482979 GYS1P13807 737 aa17.53■□□□□ 0.4
ZKSCAN1-204ENST00000482979 RIPK4P57078 832 aa17.53■□□□□ 0.4
ZKSCAN1-204ENST00000482979 PXDNLA1KZ92 1463 aa17.53■□□□□ 0.4
ZKSCAN1-204ENST00000482979 ADRA2BP18089 450 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms