RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 UPP2O95045 317 aa6.12□□□□□ -1.43
CLCC1-209ENST00000482889 LCE2AQ5TA79 106 aaPredicted RBP6.12□□□□□ -1.43
CLCC1-209ENST00000482889 ZNF784Q8NCA9 323 aaPredicted RBP6.12□□□□□ -1.43
CLCC1-209ENST00000482889 PRIMPOLQ96LW4 560 aa6.12□□□□□ -1.43
CLCC1-209ENST00000482889 TMPRSS4Q9NRS4 437 aa6.12□□□□□ -1.43
CLCC1-209ENST00000482889 STK17AQ9UEE5 414 aa6.12□□□□□ -1.43
CLCC1-209ENST00000482889 AMOTL2Q9Y2J4 779 aa6.12□□□□□ -1.43
CLCC1-209ENST00000482889 SOWAHDA6NJG2 315 aa6.11□□□□□ -1.43
CLCC1-209ENST00000482889 E9PSI1 815 aa6.11□□□□□ -1.43
CLCC1-209ENST00000482889 ATP5J2-PTCD1G3V325 749 aa6.11□□□□□ -1.43
CLCC1-209ENST00000482889 SNRPBP14678 240 aaKnown RBP6.11□□□□□ -1.43
CLCC1-209ENST00000482889 ATP2B4P23634 1241 aa6.11□□□□□ -1.43
CLCC1-209ENST00000482889 ARID4AP29374 1257 aaPredicted RBP6.11□□□□□ -1.43
CLCC1-209ENST00000482889 CBLBQ13191 982 aa6.11□□□□□ -1.43
CLCC1-209ENST00000482889 CCER1Q8TC90 406 aaPredicted RBP6.11□□□□□ -1.43
CLCC1-209ENST00000482889 PURBQ96QR8 312 aaKnown RBP6.11□□□□□ -1.43
CLCC1-209ENST00000482889 SFI1A8K8P3 1242 aa6.1□□□□□ -1.43
CLCC1-209ENST00000482889 ADH1AP07327 375 aa6.1□□□□□ -1.43
CLCC1-209ENST00000482889 RAB15P59190 212 aa6.1□□□□□ -1.43
CLCC1-209ENST00000482889 ERVK-9P63128 1117 aa6.1□□□□□ -1.43
CLCC1-209ENST00000482889 ECM1Q16610 540 aa6.1□□□□□ -1.43
CLCC1-209ENST00000482889 CAPN12Q6ZSI9 719 aa6.1□□□□□ -1.43
CLCC1-209ENST00000482889 DNAAF2Q9NVR5 837 aaKnown RBP6.1□□□□□ -1.43
CLCC1-209ENST00000482889 PCDHGA11Q9Y5H2 935 aa6.1□□□□□ -1.43
CLCC1-209ENST00000482889 SPINT1O43278 529 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 PRMT3O60678 531 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 BMP2P12643 396 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 OCLNQ16625 522 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 EML3Q32P44 896 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 OXLD1Q5BKU9 147 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 CC2D2BQ6DHV5 1058 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 ANO2Q9NQ90 1003 aa6.09□□□□□ -1.43
CLCC1-209ENST00000482889 KIAA1522Q9P206 1035 aaPredicted RBP6.09□□□□□ -1.43
CLCC1-209ENST00000482889 SOS2Q07890 1332 aaPredicted RBP6.08□□□□□ -1.44
CLCC1-209ENST00000482889 ADD1P35611 737 aaKnown RBP6.08□□□□□ -1.44
CLCC1-209ENST00000482889 MAP7D1Q3KQU3 841 aa6.08□□□□□ -1.44
CLCC1-209ENST00000482889 C6orf118Q5T5N4 469 aa6.08□□□□□ -1.44
CLCC1-209ENST00000482889 B4GALNT3Q6L9W6 998 aa6.08□□□□□ -1.44
CLCC1-209ENST00000482889 TAS1R3Q7RTX0 852 aa6.08□□□□□ -1.44
CLCC1-209ENST00000482889 RBM47A0AV96 593 aaKnown RBP6.07□□□□□ -1.44
CLCC1-209ENST00000482889 LZTS3O60299 673 aaPredicted RBP6.07□□□□□ -1.44
CLCC1-209ENST00000482889 GTF2IP78347 998 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 TAGLNQ01995 201 aaKnown RBP6.07□□□□□ -1.44
CLCC1-209ENST00000482889 CCDC102BQ68D86 513 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 SIX5Q8N196 739 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 KDF1Q8NAX2 398 aaPredicted RBP6.07□□□□□ -1.44
CLCC1-209ENST00000482889 CYLDQ9NQC7 956 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 IGSF5Q9NSI5 407 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 DOLKQ9UPQ8 538 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 NOD1Q9Y239 953 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 PCDHB11Q9Y5F2 797 aa6.07□□□□□ -1.44
CLCC1-209ENST00000482889 STAU1O95793 577 aaKnown RBP6.06□□□□□ -1.44
CLCC1-209ENST00000482889 PTGIRP43119 386 aa6.06□□□□□ -1.44
CLCC1-209ENST00000482889 ZNF211Q13398 564 aaPredicted RBP6.06□□□□□ -1.44
CLCC1-209ENST00000482889 NPAS3Q8IXF0 933 aa6.06□□□□□ -1.44
CLCC1-209ENST00000482889 LARGE2Q8N3Y3 721 aa6.06□□□□□ -1.44
CLCC1-209ENST00000482889 SEPT3Q9UH03 358 aa6.06□□□□□ -1.44
CLCC1-209ENST00000482889 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 TTLL8A6PVC2 850 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 WFS1O76024 890 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 INSM1Q01101 510 aaPredicted RBP6.05□□□□□ -1.44
CLCC1-209ENST00000482889 SWI5Q1ZZU3 235 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 CYP2U1Q7Z449 544 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 TPCN2Q8NHX9 752 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 AGBL1Q96MI9 1066 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
CLCC1-209ENST00000482889 CXXC1Q9P0U4 656 aaPredicted RBP6.05□□□□□ -1.44
CLCC1-209ENST00000482889 TERTO14746 1132 aaKnown RBP6.04□□□□□ -1.44
CLCC1-209ENST00000482889 MAN1A2O60476 641 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 SCTRP47872 440 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 SEC13P55735 322 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 RELBQ01201 579 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 MTMR3Q13615 1198 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.04□□□□□ -1.44
CLCC1-209ENST00000482889 TRIM50Q86XT4 487 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 C1orf216Q8TAB5 229 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 SIRT1Q96EB6 747 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 OSBPL3Q9H4L5 887 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 NXF1Q9UBU9 619 aaKnown RBP6.04□□□□□ -1.44
CLCC1-209ENST00000482889 DNMT3LQ9UJW3 386 aa6.04□□□□□ -1.44
CLCC1-209ENST00000482889 MYCP01106 439 aaPredicted RBP6.03□□□□□ -1.44
CLCC1-209ENST00000482889 ZNF16P17020 682 aaPredicted RBP6.03□□□□□ -1.44
CLCC1-209ENST00000482889 GPC1P35052 558 aa6.03□□□□□ -1.44
CLCC1-209ENST00000482889 ATP1A2P50993 1020 aa6.03□□□□□ -1.44
CLCC1-209ENST00000482889 MARSP56192 900 aaKnown RBP6.03□□□□□ -1.44
CLCC1-209ENST00000482889 USP4Q13107 963 aa6.03□□□□□ -1.44
CLCC1-209ENST00000482889 NPAS4Q8IUM7 802 aa6.03□□□□□ -1.44
CLCC1-209ENST00000482889 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.03□□□□□ -1.44
CLCC1-209ENST00000482889 TSEN2Q8NCE0 465 aaKnown RBP6.03□□□□□ -1.44
CLCC1-209ENST00000482889 ZNF395Q9H8N7 513 aaPredicted RBP6.03□□□□□ -1.44
CLCC1-209ENST00000482889 DNMT3AQ9Y6K1 912 aaPredicted RBP6.03□□□□□ -1.44
CLCC1-209ENST00000482889 ANKRD33BA6NCL7 494 aa6.02□□□□□ -1.45
CLCC1-209ENST00000482889 ABL1P00519 1130 aa6.02□□□□□ -1.45
CLCC1-209ENST00000482889 GNRH1P01148 92 aa6.02□□□□□ -1.45
CLCC1-209ENST00000482889 CTSOP43234 321 aaPredicted RBP6.02□□□□□ -1.45
CLCC1-209ENST00000482889 NFX1Q12986 1120 aaKnown RBP6.02□□□□□ -1.45
CLCC1-209ENST00000482889 RNF217Q8TC41 542 aa6.02□□□□□ -1.45
CLCC1-209ENST00000482889 INSM2Q96T92 566 aaPredicted RBP6.02□□□□□ -1.45
CLCC1-209ENST00000482889 MKNK1Q9BUB5 465 aa6.02□□□□□ -1.45
CLCC1-209ENST00000482889 ESF1Q9H501 851 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms