RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 ATP6V1AP38606 617 aa21.12■□□□□ 0.97
COL16A1-212ENST00000482478 SGIP1Q9BQI5 828 aa21.12■□□□□ 0.97
COL16A1-212ENST00000482478 SCN11AQ9UI33 1791 aa21.12■□□□□ 0.97
COL16A1-212ENST00000482478 UBR3Q6ZT12 1888 aa21.11■□□□□ 0.97
COL16A1-212ENST00000482478 LINC00116Q8NCU8 138 aa21.11■□□□□ 0.97
COL16A1-212ENST00000482478 ATG3Q9NT62 314 aa21.11■□□□□ 0.97
COL16A1-212ENST00000482478 MRC1P22897 1456 aa21.11■□□□□ 0.97
COL16A1-212ENST00000482478 COL24A1Q17RW2 1714 aa21.1■□□□□ 0.97
COL16A1-212ENST00000482478 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
COL16A1-212ENST00000482478 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
COL16A1-212ENST00000482478 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
COL16A1-212ENST00000482478 AKAP4Q5JQC9 854 aa21.09■□□□□ 0.97
COL16A1-212ENST00000482478 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
COL16A1-212ENST00000482478 GNPATO15228 680 aa21.08■□□□□ 0.97
COL16A1-212ENST00000482478 COL5A3P25940 1745 aaPredicted RBP21.08■□□□□ 0.97
COL16A1-212ENST00000482478 ITPK1Q13572 414 aa21.08■□□□□ 0.97
COL16A1-212ENST00000482478 ZNF831Q5JPB2 1677 aa21.07■□□□□ 0.96
COL16A1-212ENST00000482478 MAP3K5Q99683 1374 aa21.07■□□□□ 0.96
COL16A1-212ENST00000482478 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
COL16A1-212ENST00000482478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.06■□□□□ 0.96
COL16A1-212ENST00000482478 PPP2R1AP30153 589 aa21.05■□□□□ 0.96
COL16A1-212ENST00000482478 MTHFSDQ2M296 383 aaKnown RBP21.05■□□□□ 0.96
COL16A1-212ENST00000482478 SYT17Q9BSW7 474 aa21.05■□□□□ 0.96
COL16A1-212ENST00000482478 TJP1Q07157 1748 aa21.04■□□□□ 0.96
COL16A1-212ENST00000482478 SSFA2P28290 1259 aa21.04■□□□□ 0.96
COL16A1-212ENST00000482478 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
COL16A1-212ENST00000482478 ADAMTS7Q9UKP4 1686 aa21.04■□□□□ 0.96
COL16A1-212ENST00000482478 PTCD1O75127 700 aaKnown RBP21.03■□□□□ 0.96
COL16A1-212ENST00000482478 NFATC2IPQ8NCF5 419 aa21.03■□□□□ 0.96
COL16A1-212ENST00000482478 NUDCQ9Y266 331 aa21.03■□□□□ 0.96
COL16A1-212ENST00000482478 CICQ96RK0 1608 aaPredicted RBP21.03■□□□□ 0.96
COL16A1-212ENST00000482478 SMIM5Q71RC9 77 aa21.02■□□□□ 0.96
COL16A1-212ENST00000482478 GAS2L2Q8NHY3 880 aa21.02■□□□□ 0.96
COL16A1-212ENST00000482478 SLC52A2Q9HAB3 445 aa21.02■□□□□ 0.96
COL16A1-212ENST00000482478 RNMTO43148 476 aaKnown RBP21.01■□□□□ 0.95
COL16A1-212ENST00000482478 PRKAR2BP31323 418 aa21.01■□□□□ 0.95
COL16A1-212ENST00000482478 CNTNAP4Q9C0A0 1308 aa21.01■□□□□ 0.95
COL16A1-212ENST00000482478 SLC4A9Q96Q91 983 aa21■□□□□ 0.95
COL16A1-212ENST00000482478 C4AP0C0L4 1744 aa20.99■□□□□ 0.95
COL16A1-212ENST00000482478 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
COL16A1-212ENST00000482478 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
COL16A1-212ENST00000482478 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
COL16A1-212ENST00000482478 RTCBQ9Y3I0 505 aaKnown RBP20.99■□□□□ 0.95
COL16A1-212ENST00000482478 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
COL16A1-212ENST00000482478 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
COL16A1-212ENST00000482478 RSPH6AQ9H0K4 717 aa20.97■□□□□ 0.95
COL16A1-212ENST00000482478 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
COL16A1-212ENST00000482478 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
COL16A1-212ENST00000482478 YY1P25490 414 aa20.95■□□□□ 0.94
COL16A1-212ENST00000482478 TEFQ10587 303 aa20.95■□□□□ 0.94
COL16A1-212ENST00000482478 SLC39A6Q13433 755 aa20.95■□□□□ 0.94
COL16A1-212ENST00000482478 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
COL16A1-212ENST00000482478 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
COL16A1-212ENST00000482478 ADRA2BP18089 450 aa20.93■□□□□ 0.94
COL16A1-212ENST00000482478 CRKLP46109 303 aaKnown RBP20.93■□□□□ 0.94
COL16A1-212ENST00000482478 GPR162Q16538 588 aa20.93■□□□□ 0.94
COL16A1-212ENST00000482478 TRAPPC3LQ5T215 181 aa20.93■□□□□ 0.94
COL16A1-212ENST00000482478 UTRNP46939 3433 aa20.92■□□□□ 0.94
COL16A1-212ENST00000482478 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
COL16A1-212ENST00000482478 RC3H1Q5TC82 1133 aaKnown RBP20.92■□□□□ 0.94
COL16A1-212ENST00000482478 RFC4P35249 363 aa20.91■□□□□ 0.94
COL16A1-212ENST00000482478 DNAJC10Q8IXB1 793 aa20.91■□□□□ 0.94
COL16A1-212ENST00000482478 PHACTR3Q96KR7 559 aa20.91■□□□□ 0.94
COL16A1-212ENST00000482478 MYH14Q7Z406 1995 aaKnown RBP20.9■□□□□ 0.94
COL16A1-212ENST00000482478 RPS6KA4O75676 772 aa20.9■□□□□ 0.94
COL16A1-212ENST00000482478 NEFMP07197 916 aa20.9■□□□□ 0.94
COL16A1-212ENST00000482478 DDX10Q13206 875 aaKnown RBP20.89■□□□□ 0.93
COL16A1-212ENST00000482478 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
COL16A1-212ENST00000482478 CEMIPQ8WUJ3 1361 aa20.88■□□□□ 0.93
COL16A1-212ENST00000482478 FCHSD2O94868 740 aa20.88■□□□□ 0.93
COL16A1-212ENST00000482478 MMP10P09238 476 aa20.88■□□□□ 0.93
COL16A1-212ENST00000482478 ARHGEF1Q92888 912 aaKnown RBP20.88■□□□□ 0.93
COL16A1-212ENST00000482478 CCDC87Q9NVE4 849 aa20.88■□□□□ 0.93
COL16A1-212ENST00000482478 CD2APQ9Y5K6 639 aa20.87■□□□□ 0.93
COL16A1-212ENST00000482478 COL15A1P39059 1388 aa20.86■□□□□ 0.93
COL16A1-212ENST00000482478 RALBP1Q15311 655 aa20.86■□□□□ 0.93
COL16A1-212ENST00000482478 IL17REQ8NFR9 667 aa20.86■□□□□ 0.93
COL16A1-212ENST00000482478 USP42Q9H9J4 1324 aaKnown RBP20.85■□□□□ 0.93
COL16A1-212ENST00000482478 MAPK8IP3Q9UPT6 1336 aa20.85■□□□□ 0.93
COL16A1-212ENST00000482478 SOS1Q07889 1333 aaPredicted RBP20.84■□□□□ 0.93
COL16A1-212ENST00000482478 GYS1P13807 737 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 ZNF790Q6PG37 636 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 MCM10Q7L590 875 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 VSIG10Q8N0Z9 540 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 NLGN1Q8N2Q7 840 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 SRP68Q9UHB9 627 aaKnown RBP20.84■□□□□ 0.93
COL16A1-212ENST00000482478 ZBTB1Q9Y2K1 713 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 C10orf71Q711Q0 1435 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 HEG1Q9ULI3 1381 aa20.84■□□□□ 0.93
COL16A1-212ENST00000482478 BTBD11A6QL63 1104 aa20.83■□□□□ 0.93
COL16A1-212ENST00000482478 INTS5Q6P9B9 1019 aaKnown RBP20.83■□□□□ 0.93
COL16A1-212ENST00000482478 WWC3Q9ULE0 1092 aa20.83■□□□□ 0.93
COL16A1-212ENST00000482478 GOLGB1Q14789 3259 aaKnown RBP20.82■□□□□ 0.92
COL16A1-212ENST00000482478 MYBBP1AQ9BQG0 1328 aaKnown RBP20.82■□□□□ 0.92
COL16A1-212ENST00000482478 CYP19A1P11511 503 aaPredicted RBP20.82■□□□□ 0.92
COL16A1-212ENST00000482478 ZNF496Q96IT1 587 aaPredicted RBP20.82■□□□□ 0.92
COL16A1-212ENST00000482478 FMNL2Q96PY5 1086 aa20.82■□□□□ 0.92
COL16A1-212ENST00000482478 CHD4Q14839 1912 aa20.81■□□□□ 0.92
COL16A1-212ENST00000482478 ZPR1O75312 459 aa20.81■□□□□ 0.92
COL16A1-212ENST00000482478 ZNF330Q9Y3S2 320 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms