RNA–Protein interactions for RNA: ENST00000482429.1

LTB-212, Transcript of lymphotoxin beta, humanhuman

TSL 2

Gene LTB, Length 1,388 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTB-212ENST00000482429 ITPK1Q13572 414 aa28.58■■■□□ 2.17
LTB-212ENST00000482429 ASAP1Q9ULH1 1129 aa28.58■■■□□ 2.17
LTB-212ENST00000482429 PPM1GO15355 546 aaPredicted RBP28.56■■■□□ 2.16
LTB-212ENST00000482429 ATP6V1AP38606 617 aa28.56■■■□□ 2.16
LTB-212ENST00000482429 IFNL2Q8IZJ0 200 aa28.56■■■□□ 2.16
LTB-212ENST00000482429 EYA1Q99502 592 aa28.56■■■□□ 2.16
LTB-212ENST00000482429 PLEKHG2Q9H7P9 1386 aa28.55■■■□□ 2.16
LTB-212ENST00000482429 KIAA1551Q9HCM1 1747 aa28.55■■■□□ 2.16
LTB-212ENST00000482429 MMP10P09238 476 aa28.54■■■□□ 2.16
LTB-212ENST00000482429 PHKG2P15735 406 aa28.54■■■□□ 2.16
LTB-212ENST00000482429 PXDNLA1KZ92 1463 aa28.53■■■□□ 2.16
LTB-212ENST00000482429 ATG3Q9NT62 314 aa28.53■■■□□ 2.16
LTB-212ENST00000482429 ZNF831Q5JPB2 1677 aa28.53■■■□□ 2.16
LTB-212ENST00000482429 TGFB2P61812 414 aa28.52■■■□□ 2.16
LTB-212ENST00000482429 N4BP2Q86UW6 1770 aaPredicted RBP28.51■■■□□ 2.15
LTB-212ENST00000482429 KDRP35968 1356 aa28.5■■■□□ 2.15
LTB-212ENST00000482429 NLGN1Q8N2Q7 840 aa28.5■■■□□ 2.15
LTB-212ENST00000482429 RTCBQ9Y3I0 505 aaKnown RBP28.49■■■□□ 2.15
LTB-212ENST00000482429 APLP1P51693 650 aa28.48■■■□□ 2.15
LTB-212ENST00000482429 TRAPPC3LQ5T215 181 aa28.48■■■□□ 2.15
LTB-212ENST00000482429 POLKQ9UBT6 870 aa28.48■■■□□ 2.15
LTB-212ENST00000482429 C10orf71Q711Q0 1435 aa28.47■■■□□ 2.15
LTB-212ENST00000482429 ADRA2BP18089 450 aa28.47■■■□□ 2.15
LTB-212ENST00000482429 TOMM70O94826 608 aa28.46■■■□□ 2.15
LTB-212ENST00000482429 RC3H1Q5TC82 1133 aaKnown RBP28.46■■■□□ 2.15
LTB-212ENST00000482429 COL5A3P25940 1745 aaPredicted RBP28.45■■■□□ 2.14
LTB-212ENST00000482429 ERVV-2B6SEH9 535 aa28.45■■■□□ 2.14
LTB-212ENST00000482429 BCS1LQ9Y276 419 aa28.45■■■□□ 2.14
LTB-212ENST00000482429 BRCA1P38398 1863 aaKnown RBP28.44■■■□□ 2.14
LTB-212ENST00000482429 A0A0G2JLW4 131 aa28.44■■■□□ 2.14
LTB-212ENST00000482429 HSPA5P11021 654 aaKnown RBP28.44■■■□□ 2.14
LTB-212ENST00000482429 C4AP0C0L4 1744 aa28.44■■■□□ 2.14
LTB-212ENST00000482429 SLC4A9Q96Q91 983 aa28.43■■■□□ 2.14
LTB-212ENST00000482429 CCDC87Q9NVE4 849 aa28.43■■■□□ 2.14
LTB-212ENST00000482429 EIF4A2Q14240 407 aaKnown RBP28.42■■■□□ 2.14
LTB-212ENST00000482429 ARHGEF1Q92888 912 aaKnown RBP28.42■■■□□ 2.14
LTB-212ENST00000482429 CNTNAP4Q9C0A0 1308 aa28.42■■■□□ 2.14
LTB-212ENST00000482429 EIF4G2P78344 907 aaKnown RBP eCLIP28.41■■■□□ 2.14
LTB-212ENST00000482429 HSP90AB1P08238 724 aaKnown RBP28.4■■■□□ 2.14
LTB-212ENST00000482429 GYS1P13807 737 aa28.4■■■□□ 2.14
LTB-212ENST00000482429 ARHGAP27Q6ZUM4 889 aa28.4■■■□□ 2.14
LTB-212ENST00000482429 DCAF5Q96JK2 942 aa28.4■■■□□ 2.14
LTB-212ENST00000482429 RPS6KA4O75676 772 aa28.39■■■□□ 2.14
LTB-212ENST00000482429 RBM42Q9BTD8 480 aaKnown RBP28.39■■■□□ 2.14
LTB-212ENST00000482429 ARFGEF1Q9Y6D6 1849 aa28.39■■■□□ 2.13
LTB-212ENST00000482429 DPEP1P16444 411 aa28.38■■■□□ 2.13
LTB-212ENST00000482429 RFC4P35249 363 aa28.38■■■□□ 2.13
LTB-212ENST00000482429 DNAJC5GQ8N7S2 189 aa28.38■■■□□ 2.13
LTB-212ENST00000482429 MYH14Q7Z406 1995 aaKnown RBP28.38■■■□□ 2.13
LTB-212ENST00000482429 PARP3Q9Y6F1 533 aa28.37■■■□□ 2.13
LTB-212ENST00000482429 FCHSD2O94868 740 aa28.37■■■□□ 2.13
LTB-212ENST00000482429 NMRK2Q9NPI5 230 aa28.35■■■□□ 2.13
LTB-212ENST00000482429 KCNA3P22001 575 aa28.34■■■□□ 2.13
LTB-212ENST00000482429 PLEKHO1Q53GL0 409 aaPredicted RBP28.34■■■□□ 2.13
LTB-212ENST00000482429 KDM6AO15550 1401 aaPredicted RBP28.32■■■□□ 2.12
LTB-212ENST00000482429 CABP4P57796 275 aa28.32■■■□□ 2.12
LTB-212ENST00000482429 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
LTB-212ENST00000482429 RBM46Q8TBY0 533 aaKnown RBP28.32■■■□□ 2.12
LTB-212ENST00000482429 WDR90Q96KV7 1748 aa28.31■■■□□ 2.12
LTB-212ENST00000482429 TNNT2P45379 298 aaPredicted RBP28.31■■■□□ 2.12
LTB-212ENST00000482429 ZNF316A6NFI3 1004 aaPredicted RBP28.3■■■□□ 2.12
LTB-212ENST00000482429 C9orf131Q5VYM1 1079 aa28.3■■■□□ 2.12
LTB-212ENST00000482429 ZNF530Q6P9A1 599 aaPredicted RBP28.3■■■□□ 2.12
LTB-212ENST00000482429 PIM2Q9P1W9 311 aa28.3■■■□□ 2.12
LTB-212ENST00000482429 CRKLP46109 303 aaKnown RBP28.26■■■□□ 2.12
LTB-212ENST00000482429 DALRD3Q5D0E6 543 aaKnown RBP28.26■■■□□ 2.12
LTB-212ENST00000482429 USP42Q9H9J4 1324 aaKnown RBP28.26■■■□□ 2.11
LTB-212ENST00000482429 PTCD1O75127 700 aaKnown RBP28.25■■■□□ 2.11
LTB-212ENST00000482429 MTHFSP49914 203 aa28.25■■■□□ 2.11
LTB-212ENST00000482429 FSTL1Q12841 308 aa28.25■■■□□ 2.11
LTB-212ENST00000482429 C16orf71Q8IYS4 520 aaPredicted RBP28.25■■■□□ 2.11
LTB-212ENST00000482429 KDM2BQ8NHM5 1336 aa28.24■■■□□ 2.11
LTB-212ENST00000482429 TJP1Q07157 1748 aa28.23■■■□□ 2.11
LTB-212ENST00000482429 SBF1O95248 1867 aa28.23■■■□□ 2.11
LTB-212ENST00000482429 DDR1Q08345 913 aa28.23■■■□□ 2.11
LTB-212ENST00000482429 FKBP8Q14318 412 aa28.23■■■□□ 2.11
LTB-212ENST00000482429 C1orf141Q5JVX7 400 aa28.23■■■□□ 2.11
LTB-212ENST00000482429 SRP68Q9UHB9 627 aaKnown RBP28.23■■■□□ 2.11
LTB-212ENST00000482429 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
LTB-212ENST00000482429 KCPQ6ZWJ8 1503 aa28.21■■■□□ 2.11
LTB-212ENST00000482429 KLRG1Q96E93 195 aa28.21■■■□□ 2.11
LTB-212ENST00000482429 TNRC6CQ9HCJ0 1690 aaKnown RBP28.21■■■□□ 2.11
LTB-212ENST00000482429 ADAMTS7Q9UKP4 1686 aa28.21■■■□□ 2.11
LTB-212ENST00000482429 RNF181Q9P0P0 153 aa28.2■■■□□ 2.1
LTB-212ENST00000482429 SCN11AQ9UI33 1791 aa28.19■■■□□ 2.1
LTB-212ENST00000482429 JMYQ8N9B5 988 aa28.19■■■□□ 2.1
LTB-212ENST00000482429 POLR3GLQ9BT43 218 aa28.19■■■□□ 2.1
LTB-212ENST00000482429 TM4SF1P30408 202 aa28.18■■■□□ 2.1
LTB-212ENST00000482429 AEBP1Q8IUX7 1158 aa28.18■■■□□ 2.1
LTB-212ENST00000482429 POLRMTO00411 1230 aaKnown RBP28.17■■■□□ 2.1
LTB-212ENST00000482429 INTS5Q6P9B9 1019 aaKnown RBP28.17■■■□□ 2.1
LTB-212ENST00000482429 CHRNA5P30532 468 aa28.16■■■□□ 2.1
LTB-212ENST00000482429 PANK3Q9H999 370 aa28.14■■■□□ 2.1
LTB-212ENST00000482429 RRAGCQ9HB90 399 aa28.14■■■□□ 2.1
LTB-212ENST00000482429 ZC3H4Q9UPT8 1303 aaKnown RBP28.14■■■□□ 2.1
LTB-212ENST00000482429 HTRA3P83110 453 aa28.13■■■□□ 2.09
LTB-212ENST00000482429 ZPR1O75312 459 aa28.12■■■□□ 2.09
LTB-212ENST00000482429 SULT6B1Q6IMI4 303 aa28.12■■■□□ 2.09
LTB-212ENST00000482429 AFDNP55196 1824 aaKnown RBP28.11■■■□□ 2.09
LTB-212ENST00000482429 PCNTO95613 3336 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms