RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 SSFA2P28290 1259 aa26.14■■□□□ 1.78
TMEM139-208ENST00000482420 WWC3Q9ULE0 1092 aa26.14■■□□□ 1.78
TMEM139-208ENST00000482420 GIGYF1O75420 1035 aaPredicted RBP26.13■■□□□ 1.77
TMEM139-208ENST00000482420 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
TMEM139-208ENST00000482420 MORC1Q86VD1 984 aa26.09■■□□□ 1.77
TMEM139-208ENST00000482420 ZNF530Q6P9A1 599 aaPredicted RBP26.08■■□□□ 1.77
TMEM139-208ENST00000482420 AEBP1Q8IUX7 1158 aa26.08■■□□□ 1.77
TMEM139-208ENST00000482420 RBM42Q9BTD8 480 aaKnown RBP26.08■■□□□ 1.77
TMEM139-208ENST00000482420 KDRP35968 1356 aa26.07■■□□□ 1.76
TMEM139-208ENST00000482420 PLEKHG2Q9H7P9 1386 aa26.07■■□□□ 1.76
TMEM139-208ENST00000482420 PLEKHO1Q53GL0 409 aaPredicted RBP26.07■■□□□ 1.76
TMEM139-208ENST00000482420 DCAF5Q96JK2 942 aa26.07■■□□□ 1.76
TMEM139-208ENST00000482420 KDM6AO15550 1401 aaPredicted RBP26.06■■□□□ 1.76
TMEM139-208ENST00000482420 ERVV-2B6SEH9 535 aa26.06■■□□□ 1.76
TMEM139-208ENST00000482420 HSP90AB1P08238 724 aaKnown RBP26.06■■□□□ 1.76
TMEM139-208ENST00000482420 SLC4A9Q96Q91 983 aa26.06■■□□□ 1.76
TMEM139-208ENST00000482420 ATP10DQ9P241 1426 aa26.05■■□□□ 1.76
TMEM139-208ENST00000482420 MMP10P09238 476 aa26.03■■□□□ 1.76
TMEM139-208ENST00000482420 CABP4P57796 275 aa26.03■■□□□ 1.76
TMEM139-208ENST00000482420 AMOTQ4VCS5 1084 aa26.03■■□□□ 1.76
TMEM139-208ENST00000482420 RTCBQ9Y3I0 505 aaKnown RBP26.03■■□□□ 1.76
TMEM139-208ENST00000482420 KNSTRNQ9Y448 316 aa26.03■■□□□ 1.76
TMEM139-208ENST00000482420 TRAPPC3LQ5T215 181 aa26.02■■□□□ 1.76
TMEM139-208ENST00000482420 MTHFSP49914 203 aa26.01■■□□□ 1.75
TMEM139-208ENST00000482420 C1orf141Q5JVX7 400 aa26.01■■□□□ 1.75
TMEM139-208ENST00000482420 SULT6B1Q6IMI4 303 aa26.01■■□□□ 1.75
TMEM139-208ENST00000482420 COL5A3P25940 1745 aaPredicted RBP26■■□□□ 1.75
TMEM139-208ENST00000482420 ZNF526Q8TF50 670 aaPredicted RBP25.99■■□□□ 1.75
TMEM139-208ENST00000482420 ZNF831Q5JPB2 1677 aa25.99■■□□□ 1.75
TMEM139-208ENST00000482420 CICQ96RK0 1608 aaPredicted RBP25.99■■□□□ 1.75
TMEM139-208ENST00000482420 PTCD1O75127 700 aaKnown RBP25.98■■□□□ 1.75
TMEM139-208ENST00000482420 CNTNAP4Q9C0A0 1308 aa25.97■■□□□ 1.75
TMEM139-208ENST00000482420 ARHGEF1Q92888 912 aaKnown RBP25.97■■□□□ 1.75
TMEM139-208ENST00000482420 NFATC2IPQ8NCF5 419 aa25.96■■□□□ 1.75
TMEM139-208ENST00000482420 GPBP1L1Q9HC44 474 aaPredicted RBP25.96■■□□□ 1.75
TMEM139-208ENST00000482420 ADCY9O60503 1353 aa25.95■■□□□ 1.75
TMEM139-208ENST00000482420 IL13P35225 146 aa25.95■■□□□ 1.74
TMEM139-208ENST00000482420 RFC4P35249 363 aa25.95■■□□□ 1.74
TMEM139-208ENST00000482420 RC3H1Q5TC82 1133 aaKnown RBP25.95■■□□□ 1.74
TMEM139-208ENST00000482420 PXDNLA1KZ92 1463 aa25.94■■□□□ 1.74
TMEM139-208ENST00000482420 ADRA2BP18089 450 aa25.94■■□□□ 1.74
TMEM139-208ENST00000482420 NLGN1Q8N2Q7 840 aa25.94■■□□□ 1.74
TMEM139-208ENST00000482420 RPS6KA4O75676 772 aa25.93■■□□□ 1.74
TMEM139-208ENST00000482420 AMER1Q5JTC6 1135 aaPredicted RBP25.93■■□□□ 1.74
TMEM139-208ENST00000482420 C4AP0C0L4 1744 aa25.93■■□□□ 1.74
TMEM139-208ENST00000482420 N4BP2Q86UW6 1770 aaPredicted RBP25.92■■□□□ 1.74
TMEM139-208ENST00000482420 KIF7Q2M1P5 1343 aa25.92■■□□□ 1.74
TMEM139-208ENST00000482420 GYS1P13807 737 aa25.92■■□□□ 1.74
TMEM139-208ENST00000482420 MYH14Q7Z406 1995 aaKnown RBP25.91■■□□□ 1.74
TMEM139-208ENST00000482420 KIF13BQ9NQT8 1826 aa25.91■■□□□ 1.74
TMEM139-208ENST00000482420 KIAA1551Q9HCM1 1747 aa25.91■■□□□ 1.74
TMEM139-208ENST00000482420 C10orf71Q711Q0 1435 aa25.9■■□□□ 1.74
TMEM139-208ENST00000482420 A0A0G2JLW4 131 aa25.9■■□□□ 1.74
TMEM139-208ENST00000482420 CRKLP46109 303 aaKnown RBP25.9■■□□□ 1.74
TMEM139-208ENST00000482420 BCS1LQ9Y276 419 aa25.89■■□□□ 1.74
TMEM139-208ENST00000482420 SCN11AQ9UI33 1791 aa25.89■■□□□ 1.73
TMEM139-208ENST00000482420 TJP1Q07157 1748 aa25.88■■□□□ 1.73
TMEM139-208ENST00000482420 HMOX1P09601 288 aa25.88■■□□□ 1.73
TMEM139-208ENST00000482420 CCDC87Q9NVE4 849 aa25.88■■□□□ 1.73
TMEM139-208ENST00000482420 PARP3Q9Y6F1 533 aa25.88■■□□□ 1.73
TMEM139-208ENST00000482420 TGFB2P61812 414 aa25.87■■□□□ 1.73
TMEM139-208ENST00000482420 SRP68Q9UHB9 627 aaKnown RBP25.87■■□□□ 1.73
TMEM139-208ENST00000482420 AKAP4Q5JQC9 854 aa25.86■■□□□ 1.73
TMEM139-208ENST00000482420 CC2D1BQ5T0F9 858 aaKnown RBP25.86■■□□□ 1.73
TMEM139-208ENST00000482420 DPEP1P16444 411 aa25.85■■□□□ 1.73
TMEM139-208ENST00000482420 LGR6Q9HBX8 967 aa25.85■■□□□ 1.73
TMEM139-208ENST00000482420 CNGB1Q14028 1251 aaPredicted RBP25.83■■□□□ 1.73
TMEM139-208ENST00000482420 FKBP8Q14318 412 aa25.83■■□□□ 1.73
TMEM139-208ENST00000482420 SLC52A2Q9HAB3 445 aa25.83■■□□□ 1.73
TMEM139-208ENST00000482420 USP42Q9H9J4 1324 aaKnown RBP25.83■■□□□ 1.73
TMEM139-208ENST00000482420 SLC39A6Q13433 755 aa25.81■■□□□ 1.72
TMEM139-208ENST00000482420 INTS5Q6P9B9 1019 aaKnown RBP25.81■■□□□ 1.72
TMEM139-208ENST00000482420 DNAJC10Q8IXB1 793 aa25.81■■□□□ 1.72
TMEM139-208ENST00000482420 FCHSD2O94868 740 aa25.8■■□□□ 1.72
TMEM139-208ENST00000482420 ARHGAP27Q6ZUM4 889 aa25.8■■□□□ 1.72
TMEM139-208ENST00000482420 RNMTO43148 476 aaKnown RBP25.79■■□□□ 1.72
TMEM139-208ENST00000482420 DIAPH1O60610 1272 aaKnown RBP25.79■■□□□ 1.72
TMEM139-208ENST00000482420 DDR1Q08345 913 aa25.79■■□□□ 1.72
TMEM139-208ENST00000482420 CEP350Q5VT06 3117 aa25.79■■□□□ 1.72
TMEM139-208ENST00000482420 MRC1P22897 1456 aa25.79■■□□□ 1.72
TMEM139-208ENST00000482420 PER1O15534 1290 aaPredicted RBP25.78■■□□□ 1.72
TMEM139-208ENST00000482420 MTHFSDQ2M296 383 aaKnown RBP25.78■■□□□ 1.72
TMEM139-208ENST00000482420 VIRMAQ69YN4 1812 aaKnown RBP25.78■■□□□ 1.72
TMEM139-208ENST00000482420 BRCA1P38398 1863 aaKnown RBP25.78■■□□□ 1.72
TMEM139-208ENST00000482420 KCNA3P22001 575 aa25.76■■□□□ 1.71
TMEM139-208ENST00000482420 ADAMTS7Q9UKP4 1686 aa25.76■■□□□ 1.71
TMEM139-208ENST00000482420 KCPQ6ZWJ8 1503 aa25.75■■□□□ 1.71
TMEM139-208ENST00000482420 KIF3CO14782 793 aa25.75■■□□□ 1.71
TMEM139-208ENST00000482420 ZPR1O75312 459 aa25.75■■□□□ 1.71
TMEM139-208ENST00000482420 USPL1Q5W0Q7 1092 aa25.75■■□□□ 1.71
TMEM139-208ENST00000482420 SOS1Q07889 1333 aaPredicted RBP25.74■■□□□ 1.71
TMEM139-208ENST00000482420 CYP19A1P11511 503 aaPredicted RBP25.73■■□□□ 1.71
TMEM139-208ENST00000482420 HSPA6P17066 643 aa25.73■■□□□ 1.71
TMEM139-208ENST00000482420 PIM2Q9P1W9 311 aa25.73■■□□□ 1.71
TMEM139-208ENST00000482420 POLRMTO00411 1230 aaKnown RBP25.72■■□□□ 1.71
TMEM139-208ENST00000482420 CHRNA5P30532 468 aa25.72■■□□□ 1.71
TMEM139-208ENST00000482420 ZBTB1Q9Y2K1 713 aa25.72■■□□□ 1.71
TMEM139-208ENST00000482420 COL15A1P39059 1388 aa25.71■■□□□ 1.71
TMEM139-208ENST00000482420 U2SURPO15042 1029 aaKnown RBP25.71■■□□□ 1.71
TMEM139-208ENST00000482420 DALRD3Q5D0E6 543 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms