RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 TMEM2Q9UHN6 1383 aa13.5□□□□□ -0.25
LIMK2-209ENST00000482270 MMP16P51512 607 aa13.5□□□□□ -0.25
LIMK2-209ENST00000482270 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
LIMK2-209ENST00000482270 SLC19A1P41440 591 aa13.49□□□□□ -0.25
LIMK2-209ENST00000482270 EMID1Q96A84 441 aaPredicted RBP13.49□□□□□ -0.25
LIMK2-209ENST00000482270 NUP155O75694 1391 aa13.48□□□□□ -0.25
LIMK2-209ENST00000482270 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
LIMK2-209ENST00000482270 LILRB3O75022 631 aa13.48□□□□□ -0.25
LIMK2-209ENST00000482270 PRPF38BQ5VTL8 546 aaKnown RBP13.48□□□□□ -0.25
LIMK2-209ENST00000482270 LIAT1Q6ZQX7 453 aa13.48□□□□□ -0.25
LIMK2-209ENST00000482270 EID1Q9Y6B2 187 aa13.48□□□□□ -0.25
LIMK2-209ENST00000482270 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
LIMK2-209ENST00000482270 NUDT12Q9BQG2 462 aa13.47□□□□□ -0.25
LIMK2-209ENST00000482270 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
LIMK2-209ENST00000482270 ALKQ9UM73 1620 aa13.46□□□□□ -0.25
LIMK2-209ENST00000482270 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
LIMK2-209ENST00000482270 RGS20O76081 388 aa13.44□□□□□ -0.26
LIMK2-209ENST00000482270 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
LIMK2-209ENST00000482270 ZBTB24O43167 697 aaPredicted RBP13.43□□□□□ -0.26
LIMK2-209ENST00000482270 NAIPQ13075 1403 aa13.43□□□□□ -0.26
LIMK2-209ENST00000482270 TUSC1Q2TAM9 212 aa13.43□□□□□ -0.26
LIMK2-209ENST00000482270 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
LIMK2-209ENST00000482270 ZFYVE9O95405 1425 aa13.42□□□□□ -0.26
LIMK2-209ENST00000482270 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
LIMK2-209ENST00000482270 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
LIMK2-209ENST00000482270 KIF1BO60333 1816 aa13.42□□□□□ -0.26
LIMK2-209ENST00000482270 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
LIMK2-209ENST00000482270 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
LIMK2-209ENST00000482270 V9GY48 417 aaPredicted RBP13.42□□□□□ -0.26
LIMK2-209ENST00000482270 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
LIMK2-209ENST00000482270 CCNYL3P0C7X3 344 aa13.41□□□□□ -0.26
LIMK2-209ENST00000482270 TOM1O60784 492 aa13.4□□□□□ -0.26
LIMK2-209ENST00000482270 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
LIMK2-209ENST00000482270 CTHP32929 405 aa13.4□□□□□ -0.26
LIMK2-209ENST00000482270 ZNF697Q5TEC3 545 aa13.4□□□□□ -0.26
LIMK2-209ENST00000482270 HELBQ8NG08 1087 aaPredicted RBP13.4□□□□□ -0.26
LIMK2-209ENST00000482270 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
LIMK2-209ENST00000482270 PTPRNQ16849 979 aa13.39□□□□□ -0.27
LIMK2-209ENST00000482270 SPRYD7Q5W111 196 aa13.39□□□□□ -0.27
LIMK2-209ENST00000482270 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
LIMK2-209ENST00000482270 AP1G2O75843 785 aa13.38□□□□□ -0.27
LIMK2-209ENST00000482270 PTCRAQ6ISU1 281 aaPredicted RBP13.38□□□□□ -0.27
LIMK2-209ENST00000482270 ILDR2Q71H61 639 aa13.38□□□□□ -0.27
LIMK2-209ENST00000482270 MAP10Q9P2G4 905 aa13.38□□□□□ -0.27
LIMK2-209ENST00000482270 HFM1A2PYH4 1435 aa13.38□□□□□ -0.27
LIMK2-209ENST00000482270 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
LIMK2-209ENST00000482270 HSPA1LP34931 641 aa13.37□□□□□ -0.27
LIMK2-209ENST00000482270 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
LIMK2-209ENST00000482270 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 TRPM2O94759 1503 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 SOCS7O14512 581 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 CTDSPL2Q05D32 466 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 FOXC1Q12948 553 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 TRIM32Q13049 653 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 DESI1Q6ICB0 168 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 LYPD8Q6UX82 237 aa13.36□□□□□ -0.27
LIMK2-209ENST00000482270 TMEM94Q12767 1356 aa13.34□□□□□ -0.27
LIMK2-209ENST00000482270 TNFRSF10AO00220 468 aa13.34□□□□□ -0.27
LIMK2-209ENST00000482270 KCNA6P17658 529 aa13.34□□□□□ -0.27
LIMK2-209ENST00000482270 RFC5P40937 340 aa13.34□□□□□ -0.27
LIMK2-209ENST00000482270 LINC01559Q495D7 138 aa13.34□□□□□ -0.27
LIMK2-209ENST00000482270 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
LIMK2-209ENST00000482270 GOPCQ9HD26 462 aa13.34□□□□□ -0.27
LIMK2-209ENST00000482270 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
LIMK2-209ENST00000482270 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
LIMK2-209ENST00000482270 CD2BP2O95400 341 aaKnown RBP13.33□□□□□ -0.28
LIMK2-209ENST00000482270 RPIAP49247 311 aa13.33□□□□□ -0.28
LIMK2-209ENST00000482270 ZNF598Q86UK7 904 aaKnown RBP13.33□□□□□ -0.28
LIMK2-209ENST00000482270 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
LIMK2-209ENST00000482270 LRRN4Q8WUT4 740 aa13.33□□□□□ -0.28
LIMK2-209ENST00000482270 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
LIMK2-209ENST00000482270 ADAMTS13Q76LX8 1427 aa13.32□□□□□ -0.28
LIMK2-209ENST00000482270 ROBO1Q9Y6N7 1651 aa13.32□□□□□ -0.28
LIMK2-209ENST00000482270 KCNH2Q12809 1159 aa13.32□□□□□ -0.28
LIMK2-209ENST00000482270 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
LIMK2-209ENST00000482270 EVA1BQ9NVM1 165 aa13.32□□□□□ -0.28
LIMK2-209ENST00000482270 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
LIMK2-209ENST00000482270 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
LIMK2-209ENST00000482270 PPLO60437 1756 aa13.31□□□□□ -0.28
LIMK2-209ENST00000482270 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
LIMK2-209ENST00000482270 PPP2R2DQ66LE6 453 aa13.3□□□□□ -0.28
LIMK2-209ENST00000482270 PDZRN3Q9UPQ7 1066 aa13.3□□□□□ -0.28
LIMK2-209ENST00000482270 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
LIMK2-209ENST00000482270 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
LIMK2-209ENST00000482270 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.29□□□□□ -0.28
LIMK2-209ENST00000482270 GFRA3O60609 400 aa13.28□□□□□ -0.28
LIMK2-209ENST00000482270 USP17L8P0C7I0 530 aa13.28□□□□□ -0.28
LIMK2-209ENST00000482270 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.28
LIMK2-209ENST00000482270 F12P00748 615 aaPredicted RBP13.27□□□□□ -0.29
LIMK2-209ENST00000482270 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
LIMK2-209ENST00000482270 TRIM67Q6ZTA4 783 aa13.27□□□□□ -0.29
LIMK2-209ENST00000482270 BAP1Q92560 729 aa13.27□□□□□ -0.29
LIMK2-209ENST00000482270 TBX22Q9Y458 520 aa13.27□□□□□ -0.29
LIMK2-209ENST00000482270 PTPRUQ92729 1446 aa13.27□□□□□ -0.29
LIMK2-209ENST00000482270 PHLPP1O60346 1717 aa13.27□□□□□ -0.29
LIMK2-209ENST00000482270 MSH6P52701 1360 aa13.26□□□□□ -0.29
LIMK2-209ENST00000482270 SKOR1P84550 965 aa13.26□□□□□ -0.29
LIMK2-209ENST00000482270 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
LIMK2-209ENST00000482270 HMX1Q9NP08 348 aaPredicted RBP13.25□□□□□ -0.29
LIMK2-209ENST00000482270 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms