RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PCDHB15Q9Y5E8 787 aa4.94□□□□□ -1.62
SMC6-208ENST00000481708 PSDA5PKW4 1024 aaPredicted RBP4.94□□□□□ -1.62
SMC6-208ENST00000481708 DDX11L8A8MPP1 907 aa4.94□□□□□ -1.62
SMC6-208ENST00000481708 MIA2Q96PC5 1412 aa4.94□□□□□ -1.62
SMC6-208ENST00000481708 PATL2C9JE40 543 aaKnown RBP4.94□□□□□ -1.62
SMC6-208ENST00000481708 ATG7O95352 703 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 DNAJB2P25686 324 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 SERPINB4P48594 390 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 PSEN2P49810 448 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 FAM69CQ0P6D2 419 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 GPATCH3Q96I76 525 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 POLR3GLQ9BT43 218 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 MAFBQ9Y5Q3 323 aaPredicted RBP4.93□□□□□ -1.62
SMC6-208ENST00000481708 KIF1BO60333 1816 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 MOXD2PA6NHM9 499 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 RIC3Q7Z5B4 369 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 GIPC2Q8TF65 315 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 NBPF26B4DH59 902 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 NDUFV2P19404 249 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 SREK1Q8WXA9 508 aaKnown RBP4.93□□□□□ -1.62
SMC6-208ENST00000481708 ZBED2Q9BTP6 218 aa4.93□□□□□ -1.62
SMC6-208ENST00000481708 KIAA1551Q9HCM1 1747 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 FAM135BQ49AJ0 1406 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 KANK4Q5T7N3 995 aaPredicted RBP4.92□□□□□ -1.62
SMC6-208ENST00000481708 RSBN1LQ6PCB5 846 aaPredicted RBP4.92□□□□□ -1.62
SMC6-208ENST00000481708 TBC1D9Q6ZT07 1266 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 UBE2Q2Q8WVN8 375 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 DRC1Q96MC2 740 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 UHRF1BP1Q6BDS2 1440 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 C8orf37Q96NL8 207 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMC6-208ENST00000481708 SHANK3Q9BYB0 1731 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 TRPM2O94759 1503 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 KIAA1468Q9P260 1216 aa4.92□□□□□ -1.62
SMC6-208ENST00000481708 KIF13BQ9NQT8 1826 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 PTPRUQ92729 1446 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 SPTLC1O15269 473 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 USP17L8P0C7I0 530 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 ATP1B4Q9UN42 357 aaPredicted RBP4.91□□□□□ -1.62
SMC6-208ENST00000481708 CCDC141Q6ZP82 1450 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 COL18A1P39060 1754 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 CSPP1Q1MSJ5 1256 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 FBXO33Q7Z6M2 555 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 PACS2Q86VP3 889 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 HLA-CQ95604 372 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 BCL9LQ86UU0 1499 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 SLC10A3P09131 477 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 IRX6P78412 446 aaPredicted RBP4.91□□□□□ -1.62
SMC6-208ENST00000481708 AXIN2Q9Y2T1 843 aa4.91□□□□□ -1.62
SMC6-208ENST00000481708 SOCS7O14512 581 aa4.9□□□□□ -1.62
SMC6-208ENST00000481708 SULF1Q8IWU6 871 aa4.9□□□□□ -1.62
SMC6-208ENST00000481708 BCL2L13Q9BXK5 485 aa4.9□□□□□ -1.62
SMC6-208ENST00000481708 TMEM259Q4ZIN3 620 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 DMRTA1Q5VZB9 504 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 FAM9AQ8IZU1 332 aaPredicted RBP4.9□□□□□ -1.63
SMC6-208ENST00000481708 SLC52A1Q9NWF4 448 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 ITSN1Q15811 1721 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 SNPHO15079 494 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 LILRB3O75022 631 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 DIXDC1Q155Q3 683 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 CABLES1Q8TDN4 633 aa4.9□□□□□ -1.63
SMC6-208ENST00000481708 SEPT9Q9UHD8 586 aaPredicted RBP4.9□□□□□ -1.63
SMC6-208ENST00000481708 AKAP12Q02952 1782 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 ARHGAP5Q13017 1502 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 PIK3CDO00329 1044 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 ECM1Q16610 540 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 TUSC1Q2TAM9 212 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 PCDHGC3Q9UN70 934 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 SOWAHDA6NJG2 315 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 SSFA2P28290 1259 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 GUCA2AQ02747 115 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 NAALADL2Q58DX5 795 aa4.89□□□□□ -1.63
SMC6-208ENST00000481708 VARS2Q5ST30 1063 aaKnown RBP4.89□□□□□ -1.63
SMC6-208ENST00000481708 SWT1Q5T5J6 900 aaKnown RBP4.88□□□□□ -1.63
SMC6-208ENST00000481708 NUTM1Q86Y26 1132 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 RDH13Q8NBN7 331 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 ANKRD33BA6NCL7 494 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 HOXA2O43364 376 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 AP1G2O75843 785 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 GCGRP47871 477 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 RAD51AP2Q09MP3 1159 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 ZNF592Q92610 1267 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 ARHGEF28Q8N1W1 1705 aaKnown RBP4.88□□□□□ -1.63
SMC6-208ENST00000481708 TECPR2O15040 1411 aa4.88□□□□□ -1.63
SMC6-208ENST00000481708 C9orf131Q5VYM1 1079 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 DPH6Q7L8W6 267 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 HIRIP3Q9BW71 556 aaPredicted RBP4.87□□□□□ -1.63
SMC6-208ENST00000481708 DLC1Q96QB1 1528 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 GJA5P36382 358 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 CTDSPL2Q05D32 466 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 PDE4CQ08493 712 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 RABGEF1Q9UJ41 708 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 DISP2A7MBM2 1401 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 ASXL1Q8IXJ9 1541 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 CLTCL1P53675 1640 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 PRDM16Q9HAZ2 1276 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 PPP1R1BQ9UD71 204 aaPredicted RBP4.87□□□□□ -1.63
SMC6-208ENST00000481708 MYT1LQ9UL68 1186 aa4.87□□□□□ -1.63
SMC6-208ENST00000481708 FAM208AQ9UK61 1670 aaKnown RBP4.86□□□□□ -1.63
SMC6-208ENST00000481708 DHX29Q7Z478 1369 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms