RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 ATG3Q9NT62 314 aa30.15■■■□□ 2.42
GPCPD1-206ENST00000481690 LINC00116Q8NCU8 138 aa30.14■■■□□ 2.42
GPCPD1-206ENST00000481690 KDRP35968 1356 aa30.14■■■□□ 2.41
GPCPD1-206ENST00000481690 ERVV-2B6SEH9 535 aa30.13■■■□□ 2.41
GPCPD1-206ENST00000481690 ATP6V1AP38606 617 aa30.13■■■□□ 2.41
GPCPD1-206ENST00000481690 ITPK1Q13572 414 aa30.11■■■□□ 2.41
GPCPD1-206ENST00000481690 SMIM5Q71RC9 77 aa30.11■■■□□ 2.41
GPCPD1-206ENST00000481690 AMIGO3Q86WK7 504 aa30.11■■■□□ 2.41
GPCPD1-206ENST00000481690 SCN11AQ9UI33 1791 aa30.1■■■□□ 2.41
GPCPD1-206ENST00000481690 CHD4Q14839 1912 aa30.1■■■□□ 2.41
GPCPD1-206ENST00000481690 CABP4P57796 275 aa30.1■■■□□ 2.41
GPCPD1-206ENST00000481690 VIRMAQ69YN4 1812 aaKnown RBP30.1■■■□□ 2.41
GPCPD1-206ENST00000481690 RBM42Q9BTD8 480 aaKnown RBP30.09■■■□□ 2.41
GPCPD1-206ENST00000481690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.08■■■□□ 2.41
GPCPD1-206ENST00000481690 ZNF831Q5JPB2 1677 aa30.07■■■□□ 2.41
GPCPD1-206ENST00000481690 GNPATO15228 680 aa30.07■■■□□ 2.4
GPCPD1-206ENST00000481690 HMOX1P09601 288 aa30.07■■■□□ 2.4
GPCPD1-206ENST00000481690 NPC1L1Q9UHC9 1359 aa30.06■■■□□ 2.4
GPCPD1-206ENST00000481690 COL5A3P25940 1745 aaPredicted RBP30.06■■■□□ 2.4
GPCPD1-206ENST00000481690 SSFA2P28290 1259 aa30.06■■■□□ 2.4
GPCPD1-206ENST00000481690 GPR162Q16538 588 aa30.06■■■□□ 2.4
GPCPD1-206ENST00000481690 PELP1Q8IZL8 1130 aaKnown RBP30.06■■■□□ 2.4
GPCPD1-206ENST00000481690 NLGN2Q8NFZ4 835 aa30.06■■■□□ 2.4
GPCPD1-206ENST00000481690 DIAPH1O60610 1272 aaKnown RBP30.05■■■□□ 2.4
GPCPD1-206ENST00000481690 AKAP4Q5JQC9 854 aa30.01■■■□□ 2.39
GPCPD1-206ENST00000481690 NFATC2IPQ8NCF5 419 aa30.01■■■□□ 2.39
GPCPD1-206ENST00000481690 SLC4A9Q96Q91 983 aa30.01■■■□□ 2.39
GPCPD1-206ENST00000481690 COL3A1P02461 1466 aaPredicted RBP29.99■■■□□ 2.39
GPCPD1-206ENST00000481690 PTCD1O75127 700 aaKnown RBP29.98■■■□□ 2.39
GPCPD1-206ENST00000481690 MYH14Q7Z406 1995 aaKnown RBP29.96■■■□□ 2.39
GPCPD1-206ENST00000481690 U2SURPO15042 1029 aaKnown RBP29.96■■■□□ 2.39
GPCPD1-206ENST00000481690 RTCBQ9Y3I0 505 aaKnown RBP29.96■■■□□ 2.39
GPCPD1-206ENST00000481690 TJP1Q07157 1748 aa29.96■■■□□ 2.39
GPCPD1-206ENST00000481690 CNTNAP4Q9C0A0 1308 aa29.94■■■□□ 2.38
GPCPD1-206ENST00000481690 MTHFSDQ2M296 383 aaKnown RBP29.93■■■□□ 2.38
GPCPD1-206ENST00000481690 TRAPPC3LQ5T215 181 aa29.93■■■□□ 2.38
GPCPD1-206ENST00000481690 LGR6Q9HBX8 967 aa29.93■■■□□ 2.38
GPCPD1-206ENST00000481690 CD2APQ9Y5K6 639 aa29.93■■■□□ 2.38
GPCPD1-206ENST00000481690 C4AP0C0L4 1744 aa29.93■■■□□ 2.38
GPCPD1-206ENST00000481690 SLC52A2Q9HAB3 445 aa29.92■■■□□ 2.38
GPCPD1-206ENST00000481690 MRC1P22897 1456 aa29.92■■■□□ 2.38
GPCPD1-206ENST00000481690 RNMTO43148 476 aaKnown RBP29.91■■■□□ 2.38
GPCPD1-206ENST00000481690 RC3H1Q5TC82 1133 aaKnown RBP29.91■■■□□ 2.38
GPCPD1-206ENST00000481690 CICQ96RK0 1608 aaPredicted RBP29.91■■■□□ 2.38
GPCPD1-206ENST00000481690 ADAMTS7Q9UKP4 1686 aa29.9■■■□□ 2.38
GPCPD1-206ENST00000481690 YBX3P16989 372 aaKnown RBP eCLIP29.88■■■□□ 2.37
GPCPD1-206ENST00000481690 ADRA2BP18089 450 aa29.88■■■□□ 2.37
GPCPD1-206ENST00000481690 CFAP53Q96M91 514 aa29.88■■■□□ 2.37
GPCPD1-206ENST00000481690 RPS6KA4O75676 772 aa29.87■■■□□ 2.37
GPCPD1-206ENST00000481690 ARHGEF1Q92888 912 aaKnown RBP29.87■■■□□ 2.37
GPCPD1-206ENST00000481690 MMP10P09238 476 aa29.86■■■□□ 2.37
GPCPD1-206ENST00000481690 RFC4P35249 363 aa29.86■■■□□ 2.37
GPCPD1-206ENST00000481690 CRKLP46109 303 aaKnown RBP29.86■■■□□ 2.37
GPCPD1-206ENST00000481690 ZNF784Q8NCA9 323 aaPredicted RBP29.86■■■□□ 2.37
GPCPD1-206ENST00000481690 SLC39A6Q13433 755 aa29.85■■■□□ 2.37
GPCPD1-206ENST00000481690 UTRNP46939 3433 aa29.84■■■□□ 2.37
GPCPD1-206ENST00000481690 GRIN3BO60391 1043 aa29.83■■■□□ 2.37
GPCPD1-206ENST00000481690 KCPQ6ZWJ8 1503 aa29.81■■■□□ 2.36
GPCPD1-206ENST00000481690 DNAJC10Q8IXB1 793 aa29.81■■■□□ 2.36
GPCPD1-206ENST00000481690 NLGN1Q8N2Q7 840 aa29.81■■■□□ 2.36
GPCPD1-206ENST00000481690 GAS2L2Q8NHY3 880 aa29.81■■■□□ 2.36
GPCPD1-206ENST00000481690 WWC3Q9ULE0 1092 aa29.81■■■□□ 2.36
GPCPD1-206ENST00000481690 UBR2Q8IWV8 1755 aa29.81■■■□□ 2.36
GPCPD1-206ENST00000481690 KIF13BQ9NQT8 1826 aa29.8■■■□□ 2.36
GPCPD1-206ENST00000481690 PPP2R1AP30153 589 aa29.8■■■□□ 2.36
GPCPD1-206ENST00000481690 GYS1P13807 737 aa29.79■■■□□ 2.36
GPCPD1-206ENST00000481690 NUDCQ9Y266 331 aa29.78■■■□□ 2.36
GPCPD1-206ENST00000481690 SIPA1L3O60292 1781 aaPredicted RBP29.77■■■□□ 2.36
GPCPD1-206ENST00000481690 N4BP2Q86UW6 1770 aaPredicted RBP29.77■■■□□ 2.36
GPCPD1-206ENST00000481690 GNAT3A8MTJ3 354 aa29.77■■■□□ 2.36
GPCPD1-206ENST00000481690 PRKAR2BP31323 418 aa29.77■■■□□ 2.36
GPCPD1-206ENST00000481690 INTS5Q6P9B9 1019 aaKnown RBP29.76■■■□□ 2.35
GPCPD1-206ENST00000481690 CCDC87Q9NVE4 849 aa29.76■■■□□ 2.35
GPCPD1-206ENST00000481690 SRP68Q9UHB9 627 aaKnown RBP29.76■■■□□ 2.35
GPCPD1-206ENST00000481690 TEFQ10587 303 aa29.75■■■□□ 2.35
GPCPD1-206ENST00000481690 KIAA1551Q9HCM1 1747 aa29.74■■■□□ 2.35
GPCPD1-206ENST00000481690 U2AF1L5P0DN76 240 aaPredicted RBP29.74■■■□□ 2.35
GPCPD1-206ENST00000481690 U2AF1Q01081 240 aaKnown RBP eCLIP29.74■■■□□ 2.35
GPCPD1-206ENST00000481690 TTC5Q8N0Z6 440 aa29.74■■■□□ 2.35
GPCPD1-206ENST00000481690 RSPH6AQ9H0K4 717 aa29.74■■■□□ 2.35
GPCPD1-206ENST00000481690 PARP3Q9Y6F1 533 aa29.74■■■□□ 2.35
GPCPD1-206ENST00000481690 USP42Q9H9J4 1324 aaKnown RBP29.73■■■□□ 2.35
GPCPD1-206ENST00000481690 GOLGB1Q14789 3259 aaKnown RBP29.73■■■□□ 2.35
GPCPD1-206ENST00000481690 C10orf71Q711Q0 1435 aa29.72■■■□□ 2.35
GPCPD1-206ENST00000481690 CYP19A1P11511 503 aaPredicted RBP29.72■■■□□ 2.35
GPCPD1-206ENST00000481690 IL17REQ8NFR9 667 aa29.72■■■□□ 2.35
GPCPD1-206ENST00000481690 PHACTR3Q96KR7 559 aa29.72■■■□□ 2.35
GPCPD1-206ENST00000481690 PXDNLA1KZ92 1463 aa29.71■■■□□ 2.35
GPCPD1-206ENST00000481690 SOS1Q07889 1333 aaPredicted RBP29.7■■■□□ 2.34
GPCPD1-206ENST00000481690 FKBP8Q14318 412 aa29.69■■■□□ 2.34
GPCPD1-206ENST00000481690 VSIG10Q8N0Z9 540 aa29.69■■■□□ 2.34
GPCPD1-206ENST00000481690 ZBTB1Q9Y2K1 713 aa29.69■■■□□ 2.34
GPCPD1-206ENST00000481690 ZPR1O75312 459 aa29.68■■■□□ 2.34
GPCPD1-206ENST00000481690 COL15A1P39059 1388 aa29.67■■■□□ 2.34
GPCPD1-206ENST00000481690 USPL1Q5W0Q7 1092 aa29.66■■■□□ 2.34
GPCPD1-206ENST00000481690 TGFB2P61812 414 aa29.65■■■□□ 2.34
GPCPD1-206ENST00000481690 ZNF790Q6PG37 636 aa29.65■■■□□ 2.34
GPCPD1-206ENST00000481690 ZNF496Q96IT1 587 aaPredicted RBP29.65■■■□□ 2.34
GPCPD1-206ENST00000481690 CEMIPQ8WUJ3 1361 aa29.64■■■□□ 2.34
GPCPD1-206ENST00000481690 BRCA1P38398 1863 aaKnown RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms