RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 GPR25O00155 361 aa10.19□□□□□ -0.78
PTPN12-211ENST00000481154 NCOA4Q13772 614 aa10.19□□□□□ -0.78
PTPN12-211ENST00000481154 DBN1Q16643 649 aa10.19□□□□□ -0.78
PTPN12-211ENST00000481154 EML3Q32P44 896 aa10.19□□□□□ -0.78
PTPN12-211ENST00000481154 HDGFL1Q5TGJ6 251 aa10.19□□□□□ -0.78
PTPN12-211ENST00000481154 KCTD17Q8N5Z5 321 aa10.19□□□□□ -0.78
PTPN12-211ENST00000481154 C4orf17Q53FE4 359 aa10.18□□□□□ -0.78
PTPN12-211ENST00000481154 PROSER2Q86WR7 435 aaPredicted RBP10.18□□□□□ -0.78
PTPN12-211ENST00000481154 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
PTPN12-211ENST00000481154 UCN2Q96RP3 112 aa10.18□□□□□ -0.78
PTPN12-211ENST00000481154 GPAMQ9HCL2 828 aa10.18□□□□□ -0.78
PTPN12-211ENST00000481154 SERTAD1Q9UHV2 236 aa10.18□□□□□ -0.78
PTPN12-211ENST00000481154 USP17L5A8MUK1 530 aa10.17□□□□□ -0.78
PTPN12-211ENST00000481154 TMEM229AB2RXF0 380 aa10.17□□□□□ -0.78
PTPN12-211ENST00000481154 INHAP05111 366 aa10.17□□□□□ -0.78
PTPN12-211ENST00000481154 GTF2E1P29083 439 aaPredicted RBP10.17□□□□□ -0.78
PTPN12-211ENST00000481154 GNASQ5JWF2 1037 aa10.17□□□□□ -0.78
PTPN12-211ENST00000481154 PCDHGA11Q9Y5H2 935 aa10.17□□□□□ -0.78
PTPN12-211ENST00000481154 GTF2IP78347 998 aa10.16□□□□□ -0.78
PTPN12-211ENST00000481154 GAS6Q14393 721 aa10.16□□□□□ -0.78
PTPN12-211ENST00000481154 SUZ12Q15022 739 aaKnown RBP10.16□□□□□ -0.78
PTPN12-211ENST00000481154 WDR44Q5JSH3 913 aa10.16□□□□□ -0.78
PTPN12-211ENST00000481154 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
PTPN12-211ENST00000481154 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
PTPN12-211ENST00000481154 NFATC2IPQ8NCF5 419 aa10.16□□□□□ -0.78
PTPN12-211ENST00000481154 NOD1Q9Y239 953 aa10.16□□□□□ -0.78
PTPN12-211ENST00000481154 GTPBP3Q969Y2 492 aaKnown RBP10.15□□□□□ -0.78
PTPN12-211ENST00000481154 F11P03951 625 aa10.14□□□□□ -0.79
PTPN12-211ENST00000481154 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
PTPN12-211ENST00000481154 RHBDD1Q8TEB9 315 aa10.14□□□□□ -0.79
PTPN12-211ENST00000481154 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
PTPN12-211ENST00000481154 THBS1P07996 1170 aa10.13□□□□□ -0.79
PTPN12-211ENST00000481154 PLA2G4AP47712 749 aa10.13□□□□□ -0.79
PTPN12-211ENST00000481154 PSME1Q06323 249 aa10.13□□□□□ -0.79
PTPN12-211ENST00000481154 GLMNQ92990 594 aa10.13□□□□□ -0.79
PTPN12-211ENST00000481154 A0A1B0GTH6 734 aa10.12□□□□□ -0.79
PTPN12-211ENST00000481154 H7C1W4 665 aa10.12□□□□□ -0.79
PTPN12-211ENST00000481154 SMTNP53814 917 aa10.12□□□□□ -0.79
PTPN12-211ENST00000481154 ZNF385CQ66K41 422 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-211ENST00000481154 WHAMMQ8TF30 809 aa10.12□□□□□ -0.79
PTPN12-211ENST00000481154 NUCKS1Q9H1E3 243 aaKnown RBP10.12□□□□□ -0.79
PTPN12-211ENST00000481154 RUBCNLQ9H714 662 aa10.12□□□□□ -0.79
PTPN12-211ENST00000481154 USP3Q9Y6I4 520 aa10.12□□□□□ -0.79
PTPN12-211ENST00000481154 USP17L3A6NCW0 530 aa10.11□□□□□ -0.79
PTPN12-211ENST00000481154 USP17L4A6NCW7 530 aa10.11□□□□□ -0.79
PTPN12-211ENST00000481154 RASSF7Q02833 373 aa10.11□□□□□ -0.79
PTPN12-211ENST00000481154 USP17L2Q6R6M4 530 aa10.11□□□□□ -0.79
PTPN12-211ENST00000481154 USP17L1Q7RTZ2 530 aa10.11□□□□□ -0.79
PTPN12-211ENST00000481154 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPN12-211ENST00000481154 GMCL1Q96IK5 515 aa10.11□□□□□ -0.79
PTPN12-211ENST00000481154 ATP9BO43861 1147 aa10.1□□□□□ -0.79
PTPN12-211ENST00000481154 LZTS3O60299 673 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-211ENST00000481154 ADAMTS2O95450 1211 aa10.1□□□□□ -0.79
PTPN12-211ENST00000481154 MSX1P28360 303 aa10.1□□□□□ -0.79
PTPN12-211ENST00000481154 FOXR1Q6PIV2 292 aa10.09□□□□□ -0.79
PTPN12-211ENST00000481154 TMEM151AQ8N4L1 468 aa10.09□□□□□ -0.79
PTPN12-211ENST00000481154 ZNF358Q9NW07 568 aa10.09□□□□□ -0.79
PTPN12-211ENST00000481154 KIAA1024Q9UPX6 916 aa10.09□□□□□ -0.79
PTPN12-211ENST00000481154 A6NJY4 79 aa10.08□□□□□ -0.8
PTPN12-211ENST00000481154 GDF11O95390 407 aa10.08□□□□□ -0.8
PTPN12-211ENST00000481154 SLURP2P0DP57 97 aa10.08□□□□□ -0.8
PTPN12-211ENST00000481154 PLEKHM2Q8IWE5 1019 aa10.08□□□□□ -0.8
PTPN12-211ENST00000481154 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
PTPN12-211ENST00000481154 SLC4A9Q96Q91 983 aa10.08□□□□□ -0.8
PTPN12-211ENST00000481154 A6NJR5 290 aa10.07□□□□□ -0.8
PTPN12-211ENST00000481154 CLDN10P78369 228 aa10.07□□□□□ -0.8
PTPN12-211ENST00000481154 MTFR1Q15390 333 aa10.07□□□□□ -0.8
PTPN12-211ENST00000481154 TRERF1Q96PN7 1200 aa10.07□□□□□ -0.8
PTPN12-211ENST00000481154 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
PTPN12-211ENST00000481154 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
PTPN12-211ENST00000481154 CSB-PGBD3P0DP91 1061 aa10.06□□□□□ -0.8
PTPN12-211ENST00000481154 SRSF11Q05519 484 aaKnown RBP10.06□□□□□ -0.8
PTPN12-211ENST00000481154 ZNF295-AS1Q8N0V1 137 aa10.06□□□□□ -0.8
PTPN12-211ENST00000481154 PGBD3Q8N328 593 aa10.06□□□□□ -0.8
PTPN12-211ENST00000481154 TPCN2Q8NHX9 752 aa10.06□□□□□ -0.8
PTPN12-211ENST00000481154 AIDAQ96BJ3 306 aa10.06□□□□□ -0.8
PTPN12-211ENST00000481154 MBIPQ9NS73 344 aa10.06□□□□□ -0.8
PTPN12-211ENST00000481154 TFIP11Q9UBB9 837 aaKnown RBP10.06□□□□□ -0.8
PTPN12-211ENST00000481154 ARHGEF15O94989 841 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 ATP4AP20648 1035 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 TBCELQ5QJ74 424 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 C14orf37Q86TY3 774 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 CALR3Q96L12 384 aaKnown RBP10.05□□□□□ -0.8
PTPN12-211ENST00000481154 CABP1Q9NZU7 370 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 MKRN1Q9UHC7 482 aaKnown RBP10.05□□□□□ -0.8
PTPN12-211ENST00000481154 TIMELESSQ9UNS1 1208 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
PTPN12-211ENST00000481154 IGF1RP08069 1367 aa10.04□□□□□ -0.8
PTPN12-211ENST00000481154 BACH1O14867 736 aa10.04□□□□□ -0.8
PTPN12-211ENST00000481154 ZBTB7BO15156 539 aaPredicted RBP10.04□□□□□ -0.8
PTPN12-211ENST00000481154 CCDC102BQ68D86 513 aa10.04□□□□□ -0.8
PTPN12-211ENST00000481154 LYPD4Q6UWN0 246 aa10.04□□□□□ -0.8
PTPN12-211ENST00000481154 TNS4Q8IZW8 715 aa10.04□□□□□ -0.8
PTPN12-211ENST00000481154 CDK2AP1O14519 115 aa10.03□□□□□ -0.8
PTPN12-211ENST00000481154 MX2P20592 715 aa10.03□□□□□ -0.8
PTPN12-211ENST00000481154 UBAP2LQ14157 1087 aaKnown RBP10.03□□□□□ -0.8
PTPN12-211ENST00000481154 OGFOD1Q8N543 542 aa10.03□□□□□ -0.8
PTPN12-211ENST00000481154 ZNF594Q96JF6 807 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms