RNA–Protein interactions for RNA: ENST00000480996.1

KDM4C-208, Transcript of lysine demethylase 4C, human

TSL 3

Gene KDM4C, Length 405 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM4C-208	ENST00000480996	SCTR	P47872	440 aa		5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	ERVK-9	P63128	1117 aa		5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	MTMR3	Q13615	1198 aa		5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	LCE2D	Q5TA82	110 aa	Predicted RBP	5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	RGL4	Q8IZJ4	473 aa		5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	GAS2L2	Q8NHY3	880 aa		5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	NKX2-3	Q8TAU0	364 aa		5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	MRS2	Q9HD23	443 aa		5.9	□□□□□ -1.46
KDM4C-208	ENST00000480996	POTEM	A6NI47	508 aa		5.89	□□□□□ -1.47
KDM4C-208	ENST00000480996	ZBTB24	O43167	697 aa	Predicted RBP	5.89	□□□□□ -1.47
KDM4C-208	ENST00000480996	SMARCA5	O60264	1052 aa	Predicted RBP	5.89	□□□□□ -1.47
KDM4C-208	ENST00000480996	NAA30	Q147X3	362 aa	Predicted RBP	5.89	□□□□□ -1.47
KDM4C-208	ENST00000480996	CC2D2B	Q6DHV5	1058 aa		5.89	□□□□□ -1.47
KDM4C-208	ENST00000480996	VASH1	Q7L8A9	365 aa	Predicted RBP	5.89	□□□□□ -1.47
KDM4C-208	ENST00000480996	SCG3	Q8WXD2	468 aa	Known RBP	5.89	□□□□□ -1.47
KDM4C-208	ENST00000480996	NDUFB5	O43674	189 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	RECK	O95980	971 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	SCNN1D	P51172	638 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	PTPN5	P54829	565 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	GDF10	P55107	478 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	WNT7B	P56706	349 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	XPC	Q01831	940 aa	Predicted RBP	5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	TRIM32	Q13049	653 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	GNL2	Q13823	731 aa	Known RBP	5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	RBCK1	Q9BYM8	510 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	ATAD2	Q6PL18	1390 aa		5.88	□□□□□ -1.47
KDM4C-208	ENST00000480996	EPHA4	P54764	986 aa		5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	TAGLN	Q01995	201 aa	Known RBP	5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	DHX9	Q08211	1270 aa	Known RBP	5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	ANKRD13A	Q8IZ07	590 aa		5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	TNS4	Q8IZW8	715 aa		5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	VTI1A	Q96AJ9	217 aa		5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	KRTAP3-3	Q9BYR6	98 aa		5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	KRTAP3-2	Q9BYR7	98 aa		5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	OSBPL3	Q9H4L5	887 aa		5.87	□□□□□ -1.47
KDM4C-208	ENST00000480996	INHA	P05111	366 aa		5.86	□□□□□ -1.47
KDM4C-208	ENST00000480996	C16orf46	Q6P387	395 aa		5.86	□□□□□ -1.47
KDM4C-208	ENST00000480996	TMC1	Q8TDI8	760 aa		5.86	□□□□□ -1.47
KDM4C-208	ENST00000480996	CDK15	Q96Q40	435 aa		5.86	□□□□□ -1.47
KDM4C-208	ENST00000480996	SLC4A9	Q96Q91	983 aa		5.86	□□□□□ -1.47
KDM4C-208	ENST00000480996	CITED4	Q96RK1	184 aa		5.86	□□□□□ -1.47
KDM4C-208	ENST00000480996	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	5.86	□□□□□ -1.47
KDM4C-208	ENST00000480996	PPEF1	O14829	653 aa	Predicted RBP	5.85	□□□□□ -1.47
KDM4C-208	ENST00000480996	MPST	P25325	297 aa		5.85	□□□□□ -1.47
KDM4C-208	ENST00000480996	SKOR1	P84550	965 aa		5.85	□□□□□ -1.47
KDM4C-208	ENST00000480996	ATP2B2	Q01814	1243 aa		5.85	□□□□□ -1.47
KDM4C-208	ENST00000480996	TMC7	Q7Z402	723 aa		5.85	□□□□□ -1.47
KDM4C-208	ENST00000480996	STAG2	Q8N3U4	1231 aa		5.85	□□□□□ -1.47
KDM4C-208	ENST00000480996	BACH2	Q9BYV9	841 aa		5.85	□□□□□ -1.47
KDM4C-208	ENST00000480996	PPP1R12B	O60237	982 aa	Predicted RBP	5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	STAU1	O95793	577 aa	Known RBP	5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	GNRH1	P01148	92 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	P4HB	P07237	508 aa	Known RBP	5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	ARID5B	Q14865	1188 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	ESCO1	Q5FWF5	840 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	ALKBH2	Q6NS38	261 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	CYP2U1	Q7Z449	544 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	MPND	Q8N594	471 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	ANKLE1	Q8NAG6	615 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	EHBP1	Q8NDI1	1231 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	CHMP7	Q8WUX9	453 aa	Predicted RBP	5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	TANGO6	Q9C0B7	1094 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	SAP130	Q9H0E3	1048 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	ETNK1	Q9HBU6	452 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	CYLD	Q9NQC7	956 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	SERTAD1	Q9UHV2	236 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996	BRPF3	Q9ULD4	1205 aa		5.84	□□□□□ -1.47
KDM4C-208	ENST00000480996		A0A1W2PRU2	124 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	RNF223	E7ERA6	249 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	TREH	O43280	583 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	FSHR	P23945	695 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	GRM5	P41594	1212 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	RPIA	P49247	311 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	FOXK2	Q01167	660 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	FMR1	Q06787	632 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	AAMP	Q13685	434 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	NOP9	Q86U38	636 aa	Known RBP	5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	TMEM87A	Q8NBN3	555 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	ZNF784	Q8NCA9	323 aa	Predicted RBP	5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	DMRTB1	Q96MA1	342 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	C2orf49	Q9BVC5	232 aa	Predicted RBP	5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	CCSER2	Q9H7U1	834 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	METTL5	Q9NRN9	209 aa	Known RBP	5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	TMPRSS4	Q9NRS4	437 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	NLRP2	Q9NX02	1062 aa		5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	SCHIP1	Q9P0W5	487 aa	Predicted RBP	5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	TMA7	Q9Y2S6	64 aa	Known RBP	5.83	□□□□□ -1.48
KDM4C-208	ENST00000480996	ANKRD62	A6NC57	917 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996		A6NJY4	79 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	SORBS3	O60504	671 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	LILRA1	O75019	489 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	ATP2B1	P20020	1258 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	GGCX	P38435	758 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	EIF1AX	P47813	144 aa	Known RBP	5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	PSMA6	P60900	246 aa	Known RBP	5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	PDE3B	Q13370	1112 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	MRPL58	Q14197	206 aa	Known RBP	5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	MTFR1	Q15390	333 aa		5.82	□□□□□ -1.48
KDM4C-208	ENST00000480996	PLA2G2C	Q5R387	149 aa		5.82	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms