RNA–Protein interactions for RNA: ENST00000480996.1

KDM4C-208, Transcript of lysine demethylase 4C, humanhuman

TSL 3

Gene KDM4C, Length 405 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-208ENST00000480996 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
KDM4C-208ENST00000480996 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
KDM4C-208ENST00000480996 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.45
KDM4C-208ENST00000480996 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
KDM4C-208ENST00000480996 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.57
KDM4C-208ENST00000480996 ADRA2BP18089 450 aa10.75□□□□□ -0.69
KDM4C-208ENST00000480996 FOXD1Q16676 465 aa10.66□□□□□ -0.7
KDM4C-208ENST00000480996 PPP6R1Q9UPN7 881 aa10.66□□□□□ -0.7
KDM4C-208ENST00000480996 KCNA4P22459 653 aa10.55□□□□□ -0.72
KDM4C-208ENST00000480996 EHMT2Q96KQ7 1210 aa10.42□□□□□ -0.74
KDM4C-208ENST00000480996 PPP4R3CPQ6ZMV5 832 aa10.21□□□□□ -0.77
KDM4C-208ENST00000480996 PIAS4Q8N2W9 510 aaPredicted RBP10.18□□□□□ -0.78
KDM4C-208ENST00000480996 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
KDM4C-208ENST00000480996 NCBP3Q53F19 620 aaKnown RBP10.12□□□□□ -0.79
KDM4C-208ENST00000480996 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
KDM4C-208ENST00000480996 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
KDM4C-208ENST00000480996 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
KDM4C-208ENST00000480996 SCAF1Q9H7N4 1312 aaKnown RBP9.8□□□□□ -0.84
KDM4C-208ENST00000480996 ZBTB22O15209 634 aa9.71□□□□□ -0.86
KDM4C-208ENST00000480996 MSH5O43196 834 aa9.65□□□□□ -0.86
KDM4C-208ENST00000480996 DNAJC5BQ9UF47 199 aa9.63□□□□□ -0.87
KDM4C-208ENST00000480996 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
KDM4C-208ENST00000480996 MAPK8IP2Q13387 824 aaPredicted RBP9.52□□□□□ -0.89
KDM4C-208ENST00000480996 RNF216Q9NWF9 866 aaPredicted RBP9.51□□□□□ -0.89
KDM4C-208ENST00000480996 HOXD11P31277 338 aaPredicted RBP9.33□□□□□ -0.92
KDM4C-208ENST00000480996 SLC24A1O60721 1099 aa9.32□□□□□ -0.92
KDM4C-208ENST00000480996 DMRT2Q9Y5R5 561 aa9.32□□□□□ -0.92
KDM4C-208ENST00000480996 SLC4A2P04920 1241 aa9.26□□□□□ -0.93
KDM4C-208ENST00000480996 ATXN8OSP0DMR3 200 aa9.22□□□□□ -0.93
KDM4C-208ENST00000480996 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
KDM4C-208ENST00000480996 MYCNP04198 464 aaPredicted RBP9.19□□□□□ -0.94
KDM4C-208ENST00000480996 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
KDM4C-208ENST00000480996 FKBP8Q14318 412 aa9.08□□□□□ -0.96
KDM4C-208ENST00000480996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.88□□□□□ -0.99
KDM4C-208ENST00000480996 HNRNPUL2Q1KMD3 747 aaKnown RBP8.88□□□□□ -0.99
KDM4C-208ENST00000480996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.88□□□□□ -0.993e-9■□□□□ 10.7
KDM4C-208ENST00000480996 ATF5Q9Y2D1 282 aaPredicted RBP8.88□□□□□ -0.99
KDM4C-208ENST00000480996 SAMD1Q6SPF0 538 aaPredicted RBP8.87□□□□□ -0.99
KDM4C-208ENST00000480996 DCAF8L1A6NGE4 600 aa8.86□□□□□ -0.99
KDM4C-208ENST00000480996 U3KPZ7 1027 aaPredicted RBP8.79□□□□□ -1
KDM4C-208ENST00000480996 ZNF219Q9P2Y4 722 aaPredicted RBP8.69□□□□□ -1.02
KDM4C-208ENST00000480996 APLP2Q06481 763 aa8.67□□□□□ -1.02
KDM4C-208ENST00000480996 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
KDM4C-208ENST00000480996 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
KDM4C-208ENST00000480996 PROM2Q8N271 834 aa8.55□□□□□ -1.04
KDM4C-208ENST00000480996 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
KDM4C-208ENST00000480996 VASPP50552 380 aaPredicted RBP8.5□□□□□ -1.05
KDM4C-208ENST00000480996 FBLN2P98095 1184 aa8.5□□□□□ -1.05
KDM4C-208ENST00000480996 PLCB2Q00722 1185 aa8.47□□□□□ -1.05
KDM4C-208ENST00000480996 TRHP20396 242 aaPredicted RBP8.41□□□□□ -1.06
KDM4C-208ENST00000480996 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
KDM4C-208ENST00000480996 POLA2Q14181 598 aa8.4□□□□□ -1.06
KDM4C-208ENST00000480996 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
KDM4C-208ENST00000480996 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.07
KDM4C-208ENST00000480996 CAPN15O75808 1086 aa8.33□□□□□ -1.08
KDM4C-208ENST00000480996 HAP1P54257 671 aaPredicted RBP8.33□□□□□ -1.08
KDM4C-208ENST00000480996 PKD2Q13563 968 aa8.33□□□□□ -1.08
KDM4C-208ENST00000480996 ZBTB12Q9Y330 459 aaPredicted RBP8.33□□□□□ -1.08
KDM4C-208ENST00000480996 BCANQ96GW7 911 aa8.32□□□□□ -1.08
KDM4C-208ENST00000480996 RNF39Q9H2S5 420 aa8.31□□□□□ -1.08
KDM4C-208ENST00000480996 C1QBPQ07021 282 aaKnown RBP8.25□□□□□ -1.09
KDM4C-208ENST00000480996 VSIG10Q8N0Z9 540 aa8.24□□□□□ -1.09
KDM4C-208ENST00000480996 SPOCK2Q92563 424 aa8.24□□□□□ -1.09
KDM4C-208ENST00000480996 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
KDM4C-208ENST00000480996 ABCB7O75027 752 aa8.21□□□□□ -1.1
KDM4C-208ENST00000480996 STAG3Q9UJ98 1225 aa8.21□□□□□ -1.1
KDM4C-208ENST00000480996 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.2□□□□□ -1.1
KDM4C-208ENST00000480996 ECM2O94769 699 aaPredicted RBP8.19□□□□□ -1.1
KDM4C-208ENST00000480996 BBXQ8WY36 941 aaPredicted RBP8.19□□□□□ -1.1
KDM4C-208ENST00000480996 ZNF692Q9BU19 519 aaPredicted RBP8.17□□□□□ -1.1
KDM4C-208ENST00000480996 SPDYE2BA6NHP3 402 aa8.14□□□□□ -1.11
KDM4C-208ENST00000480996 SPDYE6P0CI01 402 aa8.14□□□□□ -1.11
KDM4C-208ENST00000480996 SPDYE2Q495Y8 402 aa8.14□□□□□ -1.11
KDM4C-208ENST00000480996 PLCD3Q8N3E9 789 aa8.14□□□□□ -1.11
KDM4C-208ENST00000480996 NPM1P06748 294 aaKnown RBP eCLIP8.13□□□□□ -1.11
KDM4C-208ENST00000480996 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
KDM4C-208ENST00000480996 SSUH2Q9Y2M2 353 aa8.13□□□□□ -1.11
KDM4C-208ENST00000480996 PAXIP1Q6ZW49 1069 aaPredicted RBP8.12□□□□□ -1.11
KDM4C-208ENST00000480996 RGL2O15211 777 aa8.09□□□□□ -1.11
KDM4C-208ENST00000480996 OSCARQ8IYS5 282 aa8.09□□□□□ -1.11
KDM4C-208ENST00000480996 MIER1Q8N108 512 aa8.09□□□□□ -1.11
KDM4C-208ENST00000480996 KDM2AQ9Y2K7 1162 aa8.09□□□□□ -1.11
KDM4C-208ENST00000480996 DSG3P32926 999 aa8.08□□□□□ -1.12
KDM4C-208ENST00000480996 PABPN1Q86U42 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
KDM4C-208ENST00000480996 CFAP44Q96MT7 982 aa8.08□□□□□ -1.12
KDM4C-208ENST00000480996 PRKCSHP14314 528 aaPredicted RBP8.07□□□□□ -1.12
KDM4C-208ENST00000480996 SPRYD3Q8NCJ5 442 aa8.05□□□□□ -1.12
KDM4C-208ENST00000480996 ZBTB47Q9UFB7 747 aaPredicted RBP8.04□□□□□ -1.12
KDM4C-208ENST00000480996 PLEKHG5O94827 1062 aa8.02□□□□□ -1.13
KDM4C-208ENST00000480996 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
KDM4C-208ENST00000480996 TPRNQ4KMQ1 711 aa8□□□□□ -1.13
KDM4C-208ENST00000480996 TRIM41Q8WV44 630 aa8□□□□□ -1.13
KDM4C-208ENST00000480996 CHGAP10645 457 aaKnown RBP7.99□□□□□ -1.13
KDM4C-208ENST00000480996 TSHZ2Q9NRE2 1034 aa7.99□□□□□ -1.13
KDM4C-208ENST00000480996 HS6ST3Q8IZP7 471 aa7.93□□□□□ -1.14
KDM4C-208ENST00000480996 DNAJC5Q9H3Z4 198 aa7.91□□□□□ -1.14
KDM4C-208ENST00000480996 GSE1Q14687 1217 aa7.9□□□□□ -1.14
KDM4C-208ENST00000480996 ERICH6Q7L0X2 663 aa7.9□□□□□ -1.14
KDM4C-208ENST00000480996 POTEDQ86YR6 584 aa7.87□□□□□ -1.15
KDM4C-208ENST00000480996 NBR1Q14596 966 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms