RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 UBR3Q6ZT12 1888 aa23.19■■□□□ 1.3
LSG1-208ENST00000480853 YBX3P16989 372 aaKnown RBP eCLIP23.18■■□□□ 1.3
LSG1-208ENST00000480853 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
LSG1-208ENST00000480853 IL13P35225 146 aa23.17■■□□□ 1.3
LSG1-208ENST00000480853 SULT6B1Q6IMI4 303 aa23.17■■□□□ 1.3
LSG1-208ENST00000480853 ERVV-2B6SEH9 535 aa23.16■■□□□ 1.3
LSG1-208ENST00000480853 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
LSG1-208ENST00000480853 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
LSG1-208ENST00000480853 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
LSG1-208ENST00000480853 GNPATO15228 680 aa23.14■■□□□ 1.29
LSG1-208ENST00000480853 DCAF5Q96JK2 942 aa23.14■■□□□ 1.29
LSG1-208ENST00000480853 MTHFSP49914 203 aa23.13■■□□□ 1.29
LSG1-208ENST00000480853 CABP4P57796 275 aa23.13■■□□□ 1.29
LSG1-208ENST00000480853 CNGB1Q14028 1251 aaPredicted RBP23.13■■□□□ 1.29
LSG1-208ENST00000480853 HMGB2P26583 209 aaKnown RBP23.12■■□□□ 1.29
LSG1-208ENST00000480853 SSFA2P28290 1259 aa23.12■■□□□ 1.29
LSG1-208ENST00000480853 AMOTQ4VCS5 1084 aa23.12■■□□□ 1.29
LSG1-208ENST00000480853 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
LSG1-208ENST00000480853 HSP90AB1P08238 724 aaKnown RBP23.11■■□□□ 1.29
LSG1-208ENST00000480853 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
LSG1-208ENST00000480853 WWC3Q9ULE0 1092 aa23.11■■□□□ 1.29
LSG1-208ENST00000480853 CD2APQ9Y5K6 639 aa23.1■■□□□ 1.29
LSG1-208ENST00000480853 HMOX1P09601 288 aa23.09■■□□□ 1.29
LSG1-208ENST00000480853 KDRP35968 1356 aa23.09■■□□□ 1.29
LSG1-208ENST00000480853 PTCD1O75127 700 aaKnown RBP23.08■■□□□ 1.29
LSG1-208ENST00000480853 C1orf141Q5JVX7 400 aa23.08■■□□□ 1.29
LSG1-208ENST00000480853 LGR6Q9HBX8 967 aa23.08■■□□□ 1.29
LSG1-208ENST00000480853 PLEKHG2Q9H7P9 1386 aa23.07■■□□□ 1.28
LSG1-208ENST00000480853 MYH14Q7Z406 1995 aaKnown RBP23.07■■□□□ 1.28
LSG1-208ENST00000480853 TRAPPC3LQ5T215 181 aa23.06■■□□□ 1.28
LSG1-208ENST00000480853 ARHGEF1Q92888 912 aaKnown RBP23.05■■□□□ 1.28
LSG1-208ENST00000480853 RTCBQ9Y3I0 505 aaKnown RBP23.05■■□□□ 1.28
LSG1-208ENST00000480853 RC3H1Q5TC82 1133 aaKnown RBP23.04■■□□□ 1.28
LSG1-208ENST00000480853 GRIN3BO60391 1043 aa23.03■■□□□ 1.28
LSG1-208ENST00000480853 MMP10P09238 476 aa23.03■■□□□ 1.28
LSG1-208ENST00000480853 RPS6KA4O75676 772 aa23.02■■□□□ 1.28
LSG1-208ENST00000480853 AKAP4Q5JQC9 854 aa23.01■■□□□ 1.27
LSG1-208ENST00000480853 SLC39A6Q13433 755 aa23■■□□□ 1.27
LSG1-208ENST00000480853 MTHFSDQ2M296 383 aaKnown RBP23■■□□□ 1.27
LSG1-208ENST00000480853 CNTNAP4Q9C0A0 1308 aa23■■□□□ 1.27
LSG1-208ENST00000480853 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
LSG1-208ENST00000480853 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
LSG1-208ENST00000480853 RNMTO43148 476 aaKnown RBP22.99■■□□□ 1.27
LSG1-208ENST00000480853 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
LSG1-208ENST00000480853 GYS1P13807 737 aa22.99■■□□□ 1.27
LSG1-208ENST00000480853 CRKLP46109 303 aaKnown RBP22.99■■□□□ 1.27
LSG1-208ENST00000480853 SRP68Q9UHB9 627 aaKnown RBP22.98■■□□□ 1.27
LSG1-208ENST00000480853 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
LSG1-208ENST00000480853 RFC4P35249 363 aa22.97■■□□□ 1.27
LSG1-208ENST00000480853 SLC52A2Q9HAB3 445 aa22.97■■□□□ 1.27
LSG1-208ENST00000480853 INTS5Q6P9B9 1019 aaKnown RBP22.96■■□□□ 1.27
LSG1-208ENST00000480853 DNAJC10Q8IXB1 793 aa22.96■■□□□ 1.27
LSG1-208ENST00000480853 NLGN1Q8N2Q7 840 aa22.96■■□□□ 1.27
LSG1-208ENST00000480853 C1QTNF8P60827 252 aa22.95■■□□□ 1.26
LSG1-208ENST00000480853 A0A0G2JLW4 131 aa22.94■■□□□ 1.26
LSG1-208ENST00000480853 ADRA2BP18089 450 aa22.94■■□□□ 1.26
LSG1-208ENST00000480853 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
LSG1-208ENST00000480853 TJP1Q07157 1748 aa22.93■■□□□ 1.26
LSG1-208ENST00000480853 N4BP2Q86UW6 1770 aaPredicted RBP22.92■■□□□ 1.26
LSG1-208ENST00000480853 U2SURPO15042 1029 aaKnown RBP22.92■■□□□ 1.26
LSG1-208ENST00000480853 FKBP8Q14318 412 aa22.92■■□□□ 1.26
LSG1-208ENST00000480853 CICQ96RK0 1608 aaPredicted RBP22.91■■□□□ 1.26
LSG1-208ENST00000480853 COL3A1P02461 1466 aaPredicted RBP22.91■■□□□ 1.26
LSG1-208ENST00000480853 C4AP0C0L4 1744 aa22.9■■□□□ 1.26
LSG1-208ENST00000480853 NPC1L1Q9UHC9 1359 aa22.89■■□□□ 1.26
LSG1-208ENST00000480853 CYP19A1P11511 503 aaPredicted RBP22.89■■□□□ 1.25
LSG1-208ENST00000480853 DPEP1P16444 411 aa22.89■■□□□ 1.25
LSG1-208ENST00000480853 PARP3Q9Y6F1 533 aa22.89■■□□□ 1.25
LSG1-208ENST00000480853 PXDNLA1KZ92 1463 aa22.89■■□□□ 1.25
LSG1-208ENST00000480853 KIAA1551Q9HCM1 1747 aa22.88■■□□□ 1.25
LSG1-208ENST00000480853 GIGYF1O75420 1035 aaPredicted RBP22.88■■□□□ 1.25
LSG1-208ENST00000480853 DDR1Q08345 913 aa22.88■■□□□ 1.25
LSG1-208ENST00000480853 IL17REQ8NFR9 667 aa22.88■■□□□ 1.25
LSG1-208ENST00000480853 CCDC87Q9NVE4 849 aa22.88■■□□□ 1.25
LSG1-208ENST00000480853 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
LSG1-208ENST00000480853 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
LSG1-208ENST00000480853 USP42Q9H9J4 1324 aaKnown RBP22.87■■□□□ 1.25
LSG1-208ENST00000480853 TGFB2P61812 414 aa22.87■■□□□ 1.25
LSG1-208ENST00000480853 ZNF526Q8TF50 670 aaPredicted RBP22.87■■□□□ 1.25
LSG1-208ENST00000480853 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
LSG1-208ENST00000480853 KCNA3P22001 575 aa22.86■■□□□ 1.25
LSG1-208ENST00000480853 PHACTR3Q96KR7 559 aa22.86■■□□□ 1.25
LSG1-208ENST00000480853 BCS1LQ9Y276 419 aa22.86■■□□□ 1.25
LSG1-208ENST00000480853 C10orf71Q711Q0 1435 aa22.85■■□□□ 1.25
LSG1-208ENST00000480853 USPL1Q5W0Q7 1092 aa22.85■■□□□ 1.25
LSG1-208ENST00000480853 MRC1P22897 1456 aa22.85■■□□□ 1.25
LSG1-208ENST00000480853 ADAMTS7Q9UKP4 1686 aa22.84■■□□□ 1.25
LSG1-208ENST00000480853 KCPQ6ZWJ8 1503 aa22.84■■□□□ 1.25
LSG1-208ENST00000480853 ZBTB1Q9Y2K1 713 aa22.84■■□□□ 1.25
LSG1-208ENST00000480853 SOS1Q07889 1333 aaPredicted RBP22.83■■□□□ 1.25
LSG1-208ENST00000480853 TM4SF1P30408 202 aa22.83■■□□□ 1.25
LSG1-208ENST00000480853 ADCY9O60503 1353 aa22.82■■□□□ 1.24
LSG1-208ENST00000480853 GNAT3A8MTJ3 354 aa22.81■■□□□ 1.24
LSG1-208ENST00000480853 ZPR1O75312 459 aa22.81■■□□□ 1.24
LSG1-208ENST00000480853 ARHGAP27Q6ZUM4 889 aa22.81■■□□□ 1.24
LSG1-208ENST00000480853 POLRMTO00411 1230 aaKnown RBP22.8■■□□□ 1.24
LSG1-208ENST00000480853 KCNQ3O43525 872 aa22.8■■□□□ 1.24
LSG1-208ENST00000480853 FCHSD2O94868 740 aa22.8■■□□□ 1.24
LSG1-208ENST00000480853 CANXP27824 592 aaKnown RBP22.8■■□□□ 1.24
LSG1-208ENST00000480853 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms