RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
SNRNP200-205ENST00000480835 BARGINQ6ZT62 677 aa19.01■□□□□ 0.63
SNRNP200-205ENST00000480835 SSH1Q8WYL5 1049 aa19.01■□□□□ 0.63
SNRNP200-205ENST00000480835 SLC52A2Q9HAB3 445 aa19.01■□□□□ 0.63
SNRNP200-205ENST00000480835 SMC4Q9NTJ3 1288 aa19.01■□□□□ 0.63
SNRNP200-205ENST00000480835 MIS18AQ9NYP9 233 aa19.01■□□□□ 0.63
SNRNP200-205ENST00000480835 KIF16BQ96L93 1317 aa19■□□□□ 0.63
SNRNP200-205ENST00000480835 TNS2Q63HR2 1409 aa19■□□□□ 0.63
SNRNP200-205ENST00000480835 PLIN1O60240 522 aa19■□□□□ 0.63
SNRNP200-205ENST00000480835 CANXP27824 592 aaKnown RBP19■□□□□ 0.63
SNRNP200-205ENST00000480835 PDE3AQ14432 1141 aa19■□□□□ 0.63
SNRNP200-205ENST00000480835 CHMP4AQ9BY43 222 aa19■□□□□ 0.63
SNRNP200-205ENST00000480835 ERVV-2B6SEH9 535 aa18.99■□□□□ 0.63
SNRNP200-205ENST00000480835 EXOC5O00471 708 aa18.99■□□□□ 0.63
SNRNP200-205ENST00000480835 MS4A1P11836 297 aa18.99■□□□□ 0.63
SNRNP200-205ENST00000480835 CCDC9Q9Y3X0 531 aaKnown RBP18.99■□□□□ 0.63
SNRNP200-205ENST00000480835 ELL2O00472 640 aaPredicted RBP18.98■□□□□ 0.63
SNRNP200-205ENST00000480835 IPO8O15397 1037 aaKnown RBP18.98■□□□□ 0.63
SNRNP200-205ENST00000480835 HOXB7P09629 217 aa18.98■□□□□ 0.63
SNRNP200-205ENST00000480835 USP21Q9UK80 565 aa18.98■□□□□ 0.63
SNRNP200-205ENST00000480835 EIF4A1P60842 406 aaKnown RBP18.97■□□□□ 0.63
SNRNP200-205ENST00000480835 ZKSCAN2Q63HK3 967 aa18.97■□□□□ 0.63
SNRNP200-205ENST00000480835 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
SNRNP200-205ENST00000480835 BCL2L13Q9BXK5 485 aa18.97■□□□□ 0.63
SNRNP200-205ENST00000480835 CABP4P57796 275 aa18.96■□□□□ 0.63
SNRNP200-205ENST00000480835 MRPL50Q8N5N7 158 aaKnown RBP18.96■□□□□ 0.63
SNRNP200-205ENST00000480835 FRAT1Q92837 279 aaPredicted RBP18.96■□□□□ 0.63
SNRNP200-205ENST00000480835 KRT24Q2M2I5 525 aa18.95■□□□□ 0.62
SNRNP200-205ENST00000480835 PPP4R2Q9NY27 417 aa18.95■□□□□ 0.62
SNRNP200-205ENST00000480835 NFATC2IPQ8NCF5 419 aa18.94■□□□□ 0.62
SNRNP200-205ENST00000480835 ARHGAP45Q92619 1136 aa18.94■□□□□ 0.62
SNRNP200-205ENST00000480835 TOGARAM1Q9Y4F4 1720 aa18.94■□□□□ 0.62
SNRNP200-205ENST00000480835 DDB1Q16531 1140 aa18.93■□□□□ 0.62
SNRNP200-205ENST00000480835 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
SNRNP200-205ENST00000480835 AFF2P51816 1311 aa18.93■□□□□ 0.62
SNRNP200-205ENST00000480835 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
SNRNP200-205ENST00000480835 ZNF790Q6PG37 636 aa18.92■□□□□ 0.62
SNRNP200-205ENST00000480835 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
SNRNP200-205ENST00000480835 NOB1Q9ULX3 412 aaKnown RBP18.92■□□□□ 0.62
SNRNP200-205ENST00000480835 ITGB4P16144 1822 aa18.92■□□□□ 0.62
SNRNP200-205ENST00000480835 PAPPAQ13219 1627 aa18.92■□□□□ 0.62
SNRNP200-205ENST00000480835 C20orf194Q5TEA3 1177 aa18.91■□□□□ 0.62
SNRNP200-205ENST00000480835 EXOC6Q8TAG9 804 aa18.91■□□□□ 0.62
SNRNP200-205ENST00000480835 CRBNQ96SW2 442 aa18.91■□□□□ 0.62
SNRNP200-205ENST00000480835 STK31Q9BXU1 1019 aa18.91■□□□□ 0.62
SNRNP200-205ENST00000480835 ATRNO75882 1429 aa18.91■□□□□ 0.62
SNRNP200-205ENST00000480835 KCNQ3O43525 872 aa18.9■□□□□ 0.62
SNRNP200-205ENST00000480835 DZIP1LQ8IYY4 767 aaKnown RBP18.9■□□□□ 0.62
SNRNP200-205ENST00000480835 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
SNRNP200-205ENST00000480835 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
SNRNP200-205ENST00000480835 THSD7AQ9UPZ6 1657 aa18.89■□□□□ 0.61
SNRNP200-205ENST00000480835 AAMPQ13685 434 aa18.89■□□□□ 0.61
SNRNP200-205ENST00000480835 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.61
SNRNP200-205ENST00000480835 API5Q9BZZ5 524 aaKnown RBP18.89■□□□□ 0.61
SNRNP200-205ENST00000480835 TRPC5Q9UL62 973 aaPredicted RBP18.89■□□□□ 0.61
SNRNP200-205ENST00000480835 GIGYF1O75420 1035 aaPredicted RBP18.88■□□□□ 0.61
SNRNP200-205ENST00000480835 TRIM27P14373 513 aa18.88■□□□□ 0.61
SNRNP200-205ENST00000480835 HDGFL1Q5TGJ6 251 aa18.88■□□□□ 0.61
SNRNP200-205ENST00000480835 FMNL2Q96PY5 1086 aa18.88■□□□□ 0.61
SNRNP200-205ENST00000480835 TMOD3Q9NYL9 352 aa18.88■□□□□ 0.61
SNRNP200-205ENST00000480835 PTPRCP08575 1304 aa18.88■□□□□ 0.61
SNRNP200-205ENST00000480835 GLI3P10071 1580 aa18.88■□□□□ 0.61
SNRNP200-205ENST00000480835 SLC39A6Q13433 755 aa18.87■□□□□ 0.61
SNRNP200-205ENST00000480835 FAM98CQ17RN3 349 aaKnown RBP18.87■□□□□ 0.61
SNRNP200-205ENST00000480835 DOT1LQ8TEK3 1739 aa18.87■□□□□ 0.61
SNRNP200-205ENST00000480835 GJD4Q96KN9 370 aaPredicted RBP18.87■□□□□ 0.61
SNRNP200-205ENST00000480835 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
SNRNP200-205ENST00000480835 TCERG1O14776 1098 aaKnown RBP18.86■□□□□ 0.61
SNRNP200-205ENST00000480835 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
SNRNP200-205ENST00000480835 PANK1Q8TE04 598 aa18.86■□□□□ 0.61
SNRNP200-205ENST00000480835 KAT6BQ8WYB5 2073 aa18.86■□□□□ 0.61
SNRNP200-205ENST00000480835 C5P01031 1676 aa18.85■□□□□ 0.61
SNRNP200-205ENST00000480835 FBXO41Q8TF61 875 aa18.85■□□□□ 0.61
SNRNP200-205ENST00000480835 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
SNRNP200-205ENST00000480835 RLBP1P12271 317 aa18.84■□□□□ 0.61
SNRNP200-205ENST00000480835 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
SNRNP200-205ENST00000480835 BCL9O00512 1426 aa18.83■□□□□ 0.61
SNRNP200-205ENST00000480835 ABCC4O15439 1325 aa18.83■□□□□ 0.61
SNRNP200-205ENST00000480835 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.6
SNRNP200-205ENST00000480835 MARCH10Q8NA82 808 aaPredicted RBP18.83■□□□□ 0.6
SNRNP200-205ENST00000480835 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.6
SNRNP200-205ENST00000480835 TNNQ9UQP3 1299 aa18.83■□□□□ 0.6
SNRNP200-205ENST00000480835 COG6Q9Y2V7 657 aa18.83■□□□□ 0.6
SNRNP200-205ENST00000480835 KCPQ6ZWJ8 1503 aa18.83■□□□□ 0.6
SNRNP200-205ENST00000480835 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
SNRNP200-205ENST00000480835 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
SNRNP200-205ENST00000480835 CHMP4BQ9H444 224 aaKnown RBP18.82■□□□□ 0.6
SNRNP200-205ENST00000480835 DBF4Q9UBU7 674 aaPredicted RBP18.82■□□□□ 0.6
SNRNP200-205ENST00000480835 DDX19BQ9UMR2 479 aa18.82■□□□□ 0.6
SNRNP200-205ENST00000480835 PIGBQ92521 554 aa18.81■□□□□ 0.6
SNRNP200-205ENST00000480835 CCDC136Q96JN2 1154 aa18.81■□□□□ 0.6
SNRNP200-205ENST00000480835 A0A0G2JS52 829 aa18.8■□□□□ 0.6
SNRNP200-205ENST00000480835 MYT1Q01538 1121 aa18.8■□□□□ 0.6
SNRNP200-205ENST00000480835 TMEM57Q8N5G2 664 aa18.8■□□□□ 0.6
SNRNP200-205ENST00000480835 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
SNRNP200-205ENST00000480835 QTRT2Q9H974 415 aaKnown RBP18.8■□□□□ 0.6
SNRNP200-205ENST00000480835 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
SNRNP200-205ENST00000480835 N4BP2Q86UW6 1770 aaPredicted RBP18.79■□□□□ 0.6
SNRNP200-205ENST00000480835 FLIIQ13045 1269 aa18.79■□□□□ 0.6
SNRNP200-205ENST00000480835 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms