RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 MTHFSP49914 203 aa10.95□□□□□ -0.66
CTPS1-209ENST00000480420 WWC3Q9ULE0 1092 aa10.95□□□□□ -0.66
CTPS1-209ENST00000480420 C4BP0C0L5 1744 aa10.95□□□□□ -0.66
CTPS1-209ENST00000480420 IGSF1Q8N6C5 1336 aa10.94□□□□□ -0.66
CTPS1-209ENST00000480420 LOC102724428A0A0B4J2F2 783 aa10.94□□□□□ -0.66
CTPS1-209ENST00000480420 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
CTPS1-209ENST00000480420 SIK1P57059 783 aa10.94□□□□□ -0.66
CTPS1-209ENST00000480420 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
CTPS1-209ENST00000480420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.664e-7■■■■□ 24.2
CTPS1-209ENST00000480420 MAP3K5Q99683 1374 aa10.93□□□□□ -0.66
CTPS1-209ENST00000480420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.93□□□□□ -0.66
CTPS1-209ENST00000480420 PTCD1O75127 700 aaKnown RBP10.93□□□□□ -0.66
CTPS1-209ENST00000480420 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
CTPS1-209ENST00000480420 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
CTPS1-209ENST00000480420 FLAD1Q8NFF5 587 aa10.93□□□□□ -0.66
CTPS1-209ENST00000480420 NLGN2Q8NFZ4 835 aa10.93□□□□□ -0.66
CTPS1-209ENST00000480420 U2SURPO15042 1029 aaKnown RBP10.92□□□□□ -0.66
CTPS1-209ENST00000480420 AMOTQ4VCS5 1084 aa10.92□□□□□ -0.66
CTPS1-209ENST00000480420 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
CTPS1-209ENST00000480420 DCAF5Q96JK2 942 aa10.92□□□□□ -0.66
CTPS1-209ENST00000480420 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
CTPS1-209ENST00000480420 NCAPD2Q15021 1401 aa10.92□□□□□ -0.66
CTPS1-209ENST00000480420 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
CTPS1-209ENST00000480420 DIAPH1O60610 1272 aaKnown RBP10.91□□□□□ -0.66
CTPS1-209ENST00000480420 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
CTPS1-209ENST00000480420 ITPK1Q13572 414 aa10.91□□□□□ -0.66
CTPS1-209ENST00000480420 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
CTPS1-209ENST00000480420 COL24A1Q17RW2 1714 aa10.91□□□□□ -0.66
CTPS1-209ENST00000480420 VIRMAQ69YN4 1812 aaKnown RBP10.91□□□□□ -0.66
CTPS1-209ENST00000480420 ERVV-2B6SEH9 535 aa10.9□□□□□ -0.66
CTPS1-209ENST00000480420 IL13P35225 146 aa10.9□□□□□ -0.66
CTPS1-209ENST00000480420 AMIGO3Q86WK7 504 aa10.9□□□□□ -0.66
CTPS1-209ENST00000480420 RTCBQ9Y3I0 505 aaKnown RBP10.89□□□□□ -0.67
CTPS1-209ENST00000480420 TRAPPC3LQ5T215 181 aa10.88□□□□□ -0.67
CTPS1-209ENST00000480420 SCN11AQ9UI33 1791 aa10.88□□□□□ -0.67
CTPS1-209ENST00000480420 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
CTPS1-209ENST00000480420 PER1O15534 1290 aaPredicted RBP10.87□□□□□ -0.67
CTPS1-209ENST00000480420 SSFA2P28290 1259 aa10.87□□□□□ -0.67
CTPS1-209ENST00000480420 RFC4P35249 363 aa10.87□□□□□ -0.67
CTPS1-209ENST00000480420 LGR6Q9HBX8 967 aa10.87□□□□□ -0.67
CTPS1-209ENST00000480420 AKAP4Q5JQC9 854 aa10.86□□□□□ -0.67
CTPS1-209ENST00000480420 CFAP53Q96M91 514 aa10.86□□□□□ -0.67
CTPS1-209ENST00000480420 MMP10P09238 476 aa10.85□□□□□ -0.67
CTPS1-209ENST00000480420 YBX3P16989 372 aaKnown RBP eCLIP10.85□□□□□ -0.678e-7■□□□□ 8.9
CTPS1-209ENST00000480420 SLC39A6Q13433 755 aa10.85□□□□□ -0.67
CTPS1-209ENST00000480420 MTHFSDQ2M296 383 aaKnown RBP10.85□□□□□ -0.67
CTPS1-209ENST00000480420 SLC4A9Q96Q91 983 aa10.85□□□□□ -0.67
CTPS1-209ENST00000480420 RNMTO43148 476 aaKnown RBP10.84□□□□□ -0.67
CTPS1-209ENST00000480420 CRKLP46109 303 aaKnown RBP10.84□□□□□ -0.67
CTPS1-209ENST00000480420 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
CTPS1-209ENST00000480420 CD2APQ9Y5K6 639 aa10.84□□□□□ -0.67
CTPS1-209ENST00000480420 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
CTPS1-209ENST00000480420 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
CTPS1-209ENST00000480420 KDRP35968 1356 aa10.83□□□□□ -0.68
CTPS1-209ENST00000480420 GRIN3BO60391 1043 aa10.83□□□□□ -0.68
CTPS1-209ENST00000480420 DNAJC10Q8IXB1 793 aa10.83□□□□□ -0.68
CTPS1-209ENST00000480420 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
CTPS1-209ENST00000480420 SLC52A2Q9HAB3 445 aa10.83□□□□□ -0.68
CTPS1-209ENST00000480420 SRP68Q9UHB9 627 aaKnown RBP10.83□□□□□ -0.68
CTPS1-209ENST00000480420 ZNF330Q9Y3S2 320 aaPredicted RBP10.83□□□□□ -0.68
CTPS1-209ENST00000480420 PARP3Q9Y6F1 533 aa10.83□□□□□ -0.68
CTPS1-209ENST00000480420 N4BP2Q86UW6 1770 aaPredicted RBP10.82□□□□□ -0.68
CTPS1-209ENST00000480420 RPS6KA4O75676 772 aa10.82□□□□□ -0.68
CTPS1-209ENST00000480420 U2AF1L5P0DN76 240 aaPredicted RBP10.82□□□□□ -0.68
CTPS1-209ENST00000480420 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTPS1-209ENST00000480420 TEFQ10587 303 aa10.82□□□□□ -0.68
CTPS1-209ENST00000480420 NLGN1Q8N2Q7 840 aa10.82□□□□□ -0.68
CTPS1-209ENST00000480420 ZNF526Q8TF50 670 aaPredicted RBP10.82□□□□□ -0.68
CTPS1-209ENST00000480420 NUDCQ9Y266 331 aa10.82□□□□□ -0.68
CTPS1-209ENST00000480420 PLEKHG2Q9H7P9 1386 aa10.81□□□□□ -0.68
CTPS1-209ENST00000480420 ZPR1O75312 459 aa10.81□□□□□ -0.68
CTPS1-209ENST00000480420 PRKAR2BP31323 418 aa10.81□□□□□ -0.68
CTPS1-209ENST00000480420 RC3H1Q5TC82 1133 aaKnown RBP10.81□□□□□ -0.68
CTPS1-209ENST00000480420 ATP10DQ9P241 1426 aa10.81□□□□□ -0.68
CTPS1-209ENST00000480420 CNTNAP4Q9C0A0 1308 aa10.81□□□□□ -0.68
CTPS1-209ENST00000480420 C4AP0C0L4 1744 aa10.81□□□□□ -0.68
CTPS1-209ENST00000480420 TJP1Q07157 1748 aa10.81□□□□□ -0.68
CTPS1-209ENST00000480420 CICQ96RK0 1608 aaPredicted RBP10.8□□□□□ -0.68
CTPS1-209ENST00000480420 A0A0G2JLW4 131 aa10.8□□□□□ -0.68
CTPS1-209ENST00000480420 GNAT3A8MTJ3 354 aa10.8□□□□□ -0.68
CTPS1-209ENST00000480420 CANXP27824 592 aaKnown RBP10.8□□□□□ -0.68
CTPS1-209ENST00000480420 CCDC87Q9NVE4 849 aa10.8□□□□□ -0.68
CTPS1-209ENST00000480420 BCS1LQ9Y276 419 aa10.8□□□□□ -0.68
CTPS1-209ENST00000480420 GYS1P13807 737 aa10.79□□□□□ -0.68
CTPS1-209ENST00000480420 PPP2R1AP30153 589 aa10.79□□□□□ -0.68
CTPS1-209ENST00000480420 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
CTPS1-209ENST00000480420 ZNF831Q5JPB2 1677 aa10.79□□□□□ -0.68
CTPS1-209ENST00000480420 NEFMP07197 916 aa10.78□□□□□ -0.68
CTPS1-209ENST00000480420 FKBP8Q14318 412 aa10.78□□□□□ -0.68
CTPS1-209ENST00000480420 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
CTPS1-209ENST00000480420 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
CTPS1-209ENST00000480420 NPM2Q86SE8 214 aaKnown RBP10.78□□□□□ -0.68
CTPS1-209ENST00000480420 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
CTPS1-209ENST00000480420 PHACTR3Q96KR7 559 aa10.78□□□□□ -0.68
CTPS1-209ENST00000480420 NPC1L1Q9UHC9 1359 aa10.77□□□□□ -0.68
CTPS1-209ENST00000480420 COL3A1P02461 1466 aaPredicted RBP10.77□□□□□ -0.69
CTPS1-209ENST00000480420 FCHSD2O94868 740 aa10.77□□□□□ -0.69
CTPS1-209ENST00000480420 DPEP1P16444 411 aa10.77□□□□□ -0.69
CTPS1-209ENST00000480420 INTS5Q6P9B9 1019 aaKnown RBP10.77□□□□□ -0.69
CTPS1-209ENST00000480420 ARHGAP27Q6ZUM4 889 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms