RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 EIF4A1P60842 406 aaKnown RBP35.2■■■■□ 3.23
TNFRSF25-213ENST00000480393 PHKG2P15735 406 aa35.19■■■■□ 3.22
TNFRSF25-213ENST00000480393 HDAC1Q13547 482 aaPredicted RBP35.18■■■■□ 3.22
TNFRSF25-213ENST00000480393 IFNL2Q8IZJ0 200 aa35.18■■■■□ 3.22
TNFRSF25-213ENST00000480393 HOXB7P09629 217 aa35.18■■■■□ 3.22
TNFRSF25-213ENST00000480393 RGS3P49796 1198 aa35.18■■■■□ 3.22
TNFRSF25-213ENST00000480393 HDGFL1Q5TGJ6 251 aa35.18■■■■□ 3.22
TNFRSF25-213ENST00000480393 INTS3Q68E01 1043 aaKnown RBP35.18■■■■□ 3.22
TNFRSF25-213ENST00000480393 NECTIN2Q92692 538 aa35.18■■■■□ 3.22
TNFRSF25-213ENST00000480393 PARP4Q9UKK3 1724 aaKnown RBP35.17■■■■□ 3.22
TNFRSF25-213ENST00000480393 CHMP4AQ9BY43 222 aa35.17■■■■□ 3.22
TNFRSF25-213ENST00000480393 SIPA1L3O60292 1781 aaPredicted RBP35.16■■■■□ 3.22
TNFRSF25-213ENST00000480393 EVA1CP58658 441 aa35.15■■■■□ 3.22
TNFRSF25-213ENST00000480393 G2E3Q7L622 706 aa35.15■■■■□ 3.22
TNFRSF25-213ENST00000480393 KDM6AO15550 1401 aaPredicted RBP35.14■■■■□ 3.22
TNFRSF25-213ENST00000480393 KCNQ3O43525 872 aa35.14■■■■□ 3.22
TNFRSF25-213ENST00000480393 STRN4Q9NRL3 753 aa35.14■■■■□ 3.22
TNFRSF25-213ENST00000480393 SCN11AQ9UI33 1791 aa35.14■■■■□ 3.22
TNFRSF25-213ENST00000480393 HSP90AB1P08238 724 aaKnown RBP35.12■■■■□ 3.21
TNFRSF25-213ENST00000480393 CARD10Q9BWT7 1032 aa35.12■■■■□ 3.21
TNFRSF25-213ENST00000480393 FLIIQ13045 1269 aa35.11■■■■□ 3.21
TNFRSF25-213ENST00000480393 COL22A1Q8NFW1 1626 aaPredicted RBP35.1■■■■□ 3.21
TNFRSF25-213ENST00000480393 PDE4AP27815 886 aa35.09■■■■□ 3.21
TNFRSF25-213ENST00000480393 DCAF5Q96JK2 942 aa35.09■■■■□ 3.21
TNFRSF25-213ENST00000480393 SLC52A2Q9HAB3 445 aa35.09■■■■□ 3.21
TNFRSF25-213ENST00000480393 PDZRN3Q9UPQ7 1066 aa35.09■■■■□ 3.21
TNFRSF25-213ENST00000480393 CACNA1FO60840 1977 aa35.08■■■■□ 3.21
TNFRSF25-213ENST00000480393 CYP27B1O15528 508 aa35.08■■■■□ 3.21
TNFRSF25-213ENST00000480393 EIF2S2P20042 333 aaKnown RBP35.08■■■■□ 3.21
TNFRSF25-213ENST00000480393 FKBP5Q13451 457 aaPredicted RBP35.08■■■■□ 3.21
TNFRSF25-213ENST00000480393 C1orf115Q9H7X2 142 aa35.08■■■■□ 3.21
TNFRSF25-213ENST00000480393 LARP1Q6PKG0 1096 aaKnown RBP35.07■■■■□ 3.2
TNFRSF25-213ENST00000480393 CCT4P50991 539 aaKnown RBP35.06■■■■□ 3.2
TNFRSF25-213ENST00000480393 PCDH11XQ9BZA7 1347 aa35.06■■■■□ 3.2
TNFRSF25-213ENST00000480393 PCDH11YQ9BZA8 1340 aa35.06■■■■□ 3.2
TNFRSF25-213ENST00000480393 SLC4A10Q6U841 1118 aa35.06■■■■□ 3.2
TNFRSF25-213ENST00000480393 COL14A1Q05707 1796 aaKnown RBP35.05■■■■□ 3.2
TNFRSF25-213ENST00000480393 IL2RBP14784 551 aa35.05■■■■□ 3.2
TNFRSF25-213ENST00000480393 PHLPP1O60346 1717 aa35.05■■■■□ 3.2
TNFRSF25-213ENST00000480393 MRC1P22897 1456 aa35.04■■■■□ 3.2
TNFRSF25-213ENST00000480393 ZCRB1Q8TBF4 217 aaKnown RBP35.04■■■■□ 3.2
TNFRSF25-213ENST00000480393 F6X3S4 739 aa35.03■■■■□ 3.2
TNFRSF25-213ENST00000480393 BACH2Q9BYV9 841 aa35.03■■■■□ 3.2
TNFRSF25-213ENST00000480393 BTG4Q9NY30 223 aa35.02■■■■□ 3.2
TNFRSF25-213ENST00000480393 SMC5Q8IY18 1101 aa35.01■■■■□ 3.2
TNFRSF25-213ENST00000480393 NFATC2IPQ8NCF5 419 aa35.01■■■■□ 3.19
TNFRSF25-213ENST00000480393 HEG1Q9ULI3 1381 aa35■■■■□ 3.19
TNFRSF25-213ENST00000480393 TOM1O60784 492 aa35■■■■□ 3.19
TNFRSF25-213ENST00000480393 CHPF2Q9P2E5 772 aa35■■■■□ 3.19
TNFRSF25-213ENST00000480393 GIGYF1O75420 1035 aaPredicted RBP34.99■■■■□ 3.19
TNFRSF25-213ENST00000480393 ZNF790Q6PG37 636 aa34.99■■■■□ 3.19
TNFRSF25-213ENST00000480393 COL16A1Q07092 1604 aaPredicted RBP34.99■■■■□ 3.19
TNFRSF25-213ENST00000480393 PXDNLA1KZ92 1463 aa34.99■■■■□ 3.19
TNFRSF25-213ENST00000480393 CABP4P57796 275 aa34.97■■■■□ 3.19
TNFRSF25-213ENST00000480393 FAM161AQ3B820 660 aa34.96■■■■□ 3.19
TNFRSF25-213ENST00000480393 PHAXQ9H814 394 aaKnown RBP34.96■■■■□ 3.19
TNFRSF25-213ENST00000480393 SLC39A6Q13433 755 aa34.95■■■■□ 3.19
TNFRSF25-213ENST00000480393 PIP4K2BP78356 416 aa34.95■■■■□ 3.18
TNFRSF25-213ENST00000480393 TTC5Q8N0Z6 440 aa34.95■■■■□ 3.18
TNFRSF25-213ENST00000480393 MEIS3Q99687 375 aa34.95■■■■□ 3.18
TNFRSF25-213ENST00000480393 DBF4Q9UBU7 674 aaPredicted RBP34.95■■■■□ 3.18
TNFRSF25-213ENST00000480393 GCC1Q96CN9 775 aa34.94■■■■□ 3.18
TNFRSF25-213ENST00000480393 USP35Q9P2H5 1018 aa34.93■■■■□ 3.18
TNFRSF25-213ENST00000480393 N4BP2Q86UW6 1770 aaPredicted RBP34.92■■■■□ 3.18
TNFRSF25-213ENST00000480393 SIRT2Q8IXJ6 389 aa34.91■■■■□ 3.18
TNFRSF25-213ENST00000480393 ATP10DQ9P241 1426 aa34.9■■■■□ 3.18
TNFRSF25-213ENST00000480393 RPAP2Q8IXW5 612 aaPredicted RBP34.89■■■■□ 3.18
TNFRSF25-213ENST00000480393 SHANK3Q9BYB0 1731 aa34.89■■■■□ 3.18
TNFRSF25-213ENST00000480393 PRAMEF22A3QJZ6 481 aa34.89■■■■□ 3.18
TNFRSF25-213ENST00000480393 NUCB1Q02818 461 aa34.89■■■■□ 3.18
TNFRSF25-213ENST00000480393 ANKRD44Q8N8A2 993 aa34.89■■■■□ 3.18
TNFRSF25-213ENST00000480393 DDX54Q8TDD1 881 aaKnown RBP34.89■■■■□ 3.18
TNFRSF25-213ENST00000480393 C5P01031 1676 aa34.87■■■■□ 3.17
TNFRSF25-213ENST00000480393 ERVV-2B6SEH9 535 aa34.86■■■■□ 3.17
TNFRSF25-213ENST00000480393 ANXA1P04083 346 aa34.86■■■■□ 3.17
TNFRSF25-213ENST00000480393 NKX1-1Q15270 411 aaPredicted RBP34.86■■■■□ 3.17
TNFRSF25-213ENST00000480393 C8orf34Q49A92 452 aa34.86■■■■□ 3.17
TNFRSF25-213ENST00000480393 GNAI3P08754 354 aa34.86■■■■□ 3.17
TNFRSF25-213ENST00000480393 CEP85Q6P2H3 762 aa34.86■■■■□ 3.17
TNFRSF25-213ENST00000480393 FMNL2Q96PY5 1086 aa34.86■■■■□ 3.17
TNFRSF25-213ENST00000480393 ZNF496Q96IT1 587 aaPredicted RBP34.85■■■■□ 3.17
TNFRSF25-213ENST00000480393 HYPKQ9NX55 129 aa34.85■■■■□ 3.17
TNFRSF25-213ENST00000480393 PLCH1Q4KWH8 1693 aa34.84■■■■□ 3.17
TNFRSF25-213ENST00000480393 CHD1LQ86WJ1 897 aa34.84■■■■□ 3.17
TNFRSF25-213ENST00000480393 UBAP1LF5GYI3 381 aa34.83■■■■□ 3.17
TNFRSF25-213ENST00000480393 ADAMTS2O95450 1211 aa34.83■■■■□ 3.17
TNFRSF25-213ENST00000480393 GNAI2P04899 355 aa34.83■■■■□ 3.17
TNFRSF25-213ENST00000480393 ANP32AP39687 249 aaKnown RBP34.83■■■■□ 3.17
TNFRSF25-213ENST00000480393 DNAAF4Q8WXU2 420 aa34.83■■■■□ 3.17
TNFRSF25-213ENST00000480393 SNRPA1P09661 255 aaKnown RBP34.82■■■■□ 3.16
TNFRSF25-213ENST00000480393 PROSER3Q2NL68 480 aa34.81■■■■□ 3.16
TNFRSF25-213ENST00000480393 ANKRD45Q5TZF3 282 aa34.81■■■■□ 3.16
TNFRSF25-213ENST00000480393 SRCIN1Q9C0H9 1055 aa34.81■■■■□ 3.16
TNFRSF25-213ENST00000480393 DDX21Q9NR30 783 aaKnown RBP eCLIP34.81■■■■□ 3.16
TNFRSF25-213ENST00000480393 PI4KAP2A4QPH2 592 aa34.81■■■■□ 3.16
TNFRSF25-213ENST00000480393 PI4KAP1Q8N8J0 262 aa34.81■■■■□ 3.16
TNFRSF25-213ENST00000480393 LNPKQ9C0E8 428 aa34.81■■■■□ 3.16
TNFRSF25-213ENST00000480393 HMMRO75330 724 aa34.8■■■■□ 3.16
TNFRSF25-213ENST00000480393 DISP2A7MBM2 1401 aa34.79■■■■□ 3.16
TNFRSF25-213ENST00000480393 ADCY9O60503 1353 aa34.78■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms