RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 IL16Q14005 1332 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 KCPQ6ZWJ8 1503 aa11.74□□□□□ -0.53
NUDCD3-208ENST00000480209 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 TJP1Q07157 1748 aa11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 FAM182BQ5T319 152 aa11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 TRMT2AQ8IZ69 625 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 TSR2Q969E8 191 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
NUDCD3-208ENST00000480209 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 BCL9O00512 1426 aa11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 E9PSI1 815 aa11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 PDE3BQ13370 1112 aa11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 SLC52A2Q9HAB3 445 aa11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 MBIPQ9NS73 344 aa11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 MIS18AQ9NYP9 233 aa11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-208ENST00000480209 LY75O60449 1722 aa11.71□□□□□ -0.54
NUDCD3-208ENST00000480209 RXRBP28702 533 aa11.7□□□□□ -0.54
NUDCD3-208ENST00000480209 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
NUDCD3-208ENST00000480209 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 CHL1O00533 1208 aa11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 KCNQ3O43525 872 aa11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 TEFQ10587 303 aa11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 PTF1AQ7RTS3 328 aa11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 EP400Q96L91 3159 aa11.69□□□□□ -0.54
NUDCD3-208ENST00000480209 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 GNAI1P63096 354 aa11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 TAF7Q15545 349 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 TSPYL4Q9UJ04 414 aa11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
NUDCD3-208ENST00000480209 KCNQ2O43526 872 aa11.67□□□□□ -0.54
NUDCD3-208ENST00000480209 CABP4P57796 275 aa11.67□□□□□ -0.54
NUDCD3-208ENST00000480209 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
NUDCD3-208ENST00000480209 KRT27Q7Z3Y8 459 aa11.67□□□□□ -0.54
NUDCD3-208ENST00000480209 PIGBQ92521 554 aa11.67□□□□□ -0.54
NUDCD3-208ENST00000480209 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
NUDCD3-208ENST00000480209 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-208ENST00000480209 EXOSC9Q06265 439 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-208ENST00000480209 TSPYL6Q8N831 410 aa11.66□□□□□ -0.54
NUDCD3-208ENST00000480209 MYH16Q9H6N6 1097 aa11.66□□□□□ -0.54
NUDCD3-208ENST00000480209 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
NUDCD3-208ENST00000480209 RREB1Q92766 1687 aa11.65□□□□□ -0.54
NUDCD3-208ENST00000480209 CACNA1FO60840 1977 aa11.65□□□□□ -0.54
NUDCD3-208ENST00000480209 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
NUDCD3-208ENST00000480209 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
NUDCD3-208ENST00000480209 C8orf58Q8NAV2 365 aa11.65□□□□□ -0.54
NUDCD3-208ENST00000480209 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
NUDCD3-208ENST00000480209 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-208ENST00000480209 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
NUDCD3-208ENST00000480209 SYTL4Q96C24 671 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-208ENST00000480209 ATG3Q9NT62 314 aa11.64□□□□□ -0.55
NUDCD3-208ENST00000480209 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
NUDCD3-208ENST00000480209 ASAP1Q9ULH1 1129 aa11.64□□□□□ -0.55
NUDCD3-208ENST00000480209 MYH14Q7Z406 1995 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-208ENST00000480209 PRAMEF22A3QJZ6 481 aa11.63□□□□□ -0.55
NUDCD3-208ENST00000480209 ZNF496Q96IT1 587 aaPredicted RBP11.63□□□□□ -0.55
NUDCD3-208ENST00000480209 TUBGCP6Q96RT7 1819 aa11.63□□□□□ -0.55
NUDCD3-208ENST00000480209 N4BP2Q86UW6 1770 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-208ENST00000480209 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
NUDCD3-208ENST00000480209 TWISTNBQ3B726 338 aaPredicted RBP11.61□□□□□ -0.55
NUDCD3-208ENST00000480209 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
NUDCD3-208ENST00000480209 PALLDQ8WX93 1383 aa11.61□□□□□ -0.55
NUDCD3-208ENST00000480209 NUP188Q5SRE5 1749 aa11.6□□□□□ -0.55
NUDCD3-208ENST00000480209 VAMP4O75379 141 aa11.6□□□□□ -0.55
NUDCD3-208ENST00000480209 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
NUDCD3-208ENST00000480209 FAM196AQ6ZSG2 479 aa11.6□□□□□ -0.55
NUDCD3-208ENST00000480209 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-208ENST00000480209 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
NUDCD3-208ENST00000480209 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
NUDCD3-208ENST00000480209 TTC5Q8N0Z6 440 aa11.59□□□□□ -0.55
NUDCD3-208ENST00000480209 BCL2L13Q9BXK5 485 aa11.59□□□□□ -0.55
NUDCD3-208ENST00000480209 C4BP0C0L5 1744 aa11.59□□□□□ -0.55
NUDCD3-208ENST00000480209 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
NUDCD3-208ENST00000480209 C4AP0C0L4 1744 aa11.58□□□□□ -0.56
NUDCD3-208ENST00000480209 UBR3Q6ZT12 1888 aa11.58□□□□□ -0.56
NUDCD3-208ENST00000480209 TRIM37O94972 964 aa11.58□□□□□ -0.56
NUDCD3-208ENST00000480209 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-208ENST00000480209 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
NUDCD3-208ENST00000480209 BCL11BQ9C0K0 894 aaPredicted RBP11.58□□□□□ -0.56
NUDCD3-208ENST00000480209 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
NUDCD3-208ENST00000480209 BCORQ6W2J9 1755 aa11.57□□□□□ -0.56
NUDCD3-208ENST00000480209 BCAR3O75815 825 aa11.57□□□□□ -0.56
NUDCD3-208ENST00000480209 RARSP54136 660 aaKnown RBP11.57□□□□□ -0.56
NUDCD3-208ENST00000480209 SSH1Q8WYL5 1049 aa11.57□□□□□ -0.56
NUDCD3-208ENST00000480209 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
NUDCD3-208ENST00000480209 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
NUDCD3-208ENST00000480209 HOXB7P09629 217 aa11.56□□□□□ -0.56
NUDCD3-208ENST00000480209 CT47B1P0C2W7 299 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms