RNA–Protein interactions for RNA: ENST00000480196.2

URB1-202, Transcript of URB1 ribosome biogenesis 1 homolog (S. cerevisiae), humanhuman

TSL 3

Gene URB1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB1-202ENST00000480196 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.23
URB1-202ENST00000480196 SMIM5Q71RC9 77 aa16.5■□□□□ 0.23
URB1-202ENST00000480196 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
URB1-202ENST00000480196 SENP3-EIF4A1A0A087X0R7 540 aa16.48■□□□□ 0.23
URB1-202ENST00000480196 GNPATO15228 680 aa16.48■□□□□ 0.23
URB1-202ENST00000480196 GRIN3BO60391 1043 aa16.48■□□□□ 0.23
URB1-202ENST00000480196 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
URB1-202ENST00000480196 SSFA2P28290 1259 aa16.48■□□□□ 0.23
URB1-202ENST00000480196 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
URB1-202ENST00000480196 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
URB1-202ENST00000480196 C1QTNF8P60827 252 aa16.47■□□□□ 0.23
URB1-202ENST00000480196 ITPK1Q13572 414 aa16.47■□□□□ 0.23
URB1-202ENST00000480196 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
URB1-202ENST00000480196 MYH14Q7Z406 1995 aaKnown RBP16.47■□□□□ 0.23
URB1-202ENST00000480196 ATP10DQ9P241 1426 aa16.46■□□□□ 0.23
URB1-202ENST00000480196 ATP6V1AP38606 617 aa16.46■□□□□ 0.23
URB1-202ENST00000480196 PANK3Q9H999 370 aa16.46■□□□□ 0.23
URB1-202ENST00000480196 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
URB1-202ENST00000480196 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
URB1-202ENST00000480196 HSP90AB1P08238 724 aaKnown RBP16.43■□□□□ 0.22
URB1-202ENST00000480196 ZNF530Q6P9A1 599 aaPredicted RBP16.43■□□□□ 0.22
URB1-202ENST00000480196 CCER1Q8TC90 406 aaPredicted RBP16.43■□□□□ 0.22
URB1-202ENST00000480196 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
URB1-202ENST00000480196 ADCY9O60503 1353 aa16.42■□□□□ 0.22
URB1-202ENST00000480196 MORC1Q86VD1 984 aa16.42■□□□□ 0.22
URB1-202ENST00000480196 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
URB1-202ENST00000480196 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
URB1-202ENST00000480196 PLEKHO1Q53GL0 409 aaPredicted RBP16.41■□□□□ 0.22
URB1-202ENST00000480196 AEBP1Q8IUX7 1158 aa16.41■□□□□ 0.22
URB1-202ENST00000480196 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
URB1-202ENST00000480196 ADAMTS7Q9UKP4 1686 aa16.4■□□□□ 0.22
URB1-202ENST00000480196 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
URB1-202ENST00000480196 ERVV-2B6SEH9 535 aa16.4■□□□□ 0.22
URB1-202ENST00000480196 MMP10P09238 476 aa16.39■□□□□ 0.21
URB1-202ENST00000480196 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
URB1-202ENST00000480196 SLC4A9Q96Q91 983 aa16.39■□□□□ 0.21
URB1-202ENST00000480196 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
URB1-202ENST00000480196 MRC1P22897 1456 aa16.39■□□□□ 0.21
URB1-202ENST00000480196 CNTNAP4Q9C0A0 1308 aa16.39■□□□□ 0.21
URB1-202ENST00000480196 CABP4P57796 275 aa16.38■□□□□ 0.21
URB1-202ENST00000480196 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
URB1-202ENST00000480196 KNSTRNQ9Y448 316 aa16.38■□□□□ 0.21
URB1-202ENST00000480196 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
URB1-202ENST00000480196 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
URB1-202ENST00000480196 ZNF526Q8TF50 670 aaPredicted RBP16.37■□□□□ 0.21
URB1-202ENST00000480196 MTHFSP49914 203 aa16.36■□□□□ 0.21
URB1-202ENST00000480196 ADRA2BP18089 450 aa16.35■□□□□ 0.21
URB1-202ENST00000480196 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
URB1-202ENST00000480196 GPBP1L1Q9HC44 474 aaPredicted RBP16.35■□□□□ 0.21
URB1-202ENST00000480196 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
URB1-202ENST00000480196 DLEC1Q9Y238 1755 aa16.34■□□□□ 0.21
URB1-202ENST00000480196 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
URB1-202ENST00000480196 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
URB1-202ENST00000480196 KCPQ6ZWJ8 1503 aa16.34■□□□□ 0.21
URB1-202ENST00000480196 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
URB1-202ENST00000480196 IL13P35225 146 aa16.33■□□□□ 0.2
URB1-202ENST00000480196 RFC4P35249 363 aa16.33■□□□□ 0.2
URB1-202ENST00000480196 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
URB1-202ENST00000480196 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
URB1-202ENST00000480196 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
URB1-202ENST00000480196 GYS1P13807 737 aa16.32■□□□□ 0.2
URB1-202ENST00000480196 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
URB1-202ENST00000480196 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
URB1-202ENST00000480196 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
URB1-202ENST00000480196 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
URB1-202ENST00000480196 SCN7AQ01118 1682 aa16.31■□□□□ 0.2
URB1-202ENST00000480196 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
URB1-202ENST00000480196 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
URB1-202ENST00000480196 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
URB1-202ENST00000480196 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
URB1-202ENST00000480196 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
URB1-202ENST00000480196 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
URB1-202ENST00000480196 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
URB1-202ENST00000480196 HMOX1P09601 288 aa16.29■□□□□ 0.2
URB1-202ENST00000480196 TGFB2P61812 414 aa16.29■□□□□ 0.2
URB1-202ENST00000480196 SRP68Q9UHB9 627 aaKnown RBP16.29■□□□□ 0.2
URB1-202ENST00000480196 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
URB1-202ENST00000480196 TIAM2Q8IVF5 1701 aa16.28■□□□□ 0.2
URB1-202ENST00000480196 TNRC6CQ9HCJ0 1690 aaKnown RBP16.27■□□□□ 0.2
URB1-202ENST00000480196 SBF1O95248 1867 aa16.27■□□□□ 0.2
URB1-202ENST00000480196 CEP350Q5VT06 3117 aa16.27■□□□□ 0.2
URB1-202ENST00000480196 CC2D1BQ5T0F9 858 aaKnown RBP16.27■□□□□ 0.2
URB1-202ENST00000480196 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
URB1-202ENST00000480196 DPEP1P16444 411 aa16.26■□□□□ 0.19
URB1-202ENST00000480196 CACNA1SQ13698 1873 aa16.26■□□□□ 0.19
URB1-202ENST00000480196 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
URB1-202ENST00000480196 COL15A1P39059 1388 aa16.26■□□□□ 0.19
URB1-202ENST00000480196 FCHSD2O94868 740 aa16.25■□□□□ 0.19
URB1-202ENST00000480196 FKBP8Q14318 412 aa16.25■□□□□ 0.19
URB1-202ENST00000480196 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
URB1-202ENST00000480196 RNMTO43148 476 aaKnown RBP16.24■□□□□ 0.19
URB1-202ENST00000480196 DDR1Q08345 913 aa16.24■□□□□ 0.19
URB1-202ENST00000480196 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
URB1-202ENST00000480196 LGR6Q9HBX8 967 aa16.24■□□□□ 0.19
URB1-202ENST00000480196 COL11A2P13942 1736 aaPredicted RBP16.24■□□□□ 0.19
URB1-202ENST00000480196 WDR90Q96KV7 1748 aa16.24■□□□□ 0.19
URB1-202ENST00000480196 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
URB1-202ENST00000480196 CCDC88AQ3V6T2 1871 aa16.23■□□□□ 0.19
URB1-202ENST00000480196 ANKRD31Q8N7Z5 1873 aa16.23■□□□□ 0.19
URB1-202ENST00000480196 DIAPH1O60610 1272 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms