RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 VIRMAQ69YN4 1812 aaKnown RBP18.48■□□□□ 0.55
PKNOX1-206ENST00000480179 PDE4AP27815 886 aa18.47■□□□□ 0.55
PKNOX1-206ENST00000480179 VPS72Q15906 364 aa18.47■□□□□ 0.55
PKNOX1-206ENST00000480179 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
PKNOX1-206ENST00000480179 FAM208AQ9UK61 1670 aaKnown RBP18.47■□□□□ 0.55
PKNOX1-206ENST00000480179 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
PKNOX1-206ENST00000480179 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.55
PKNOX1-206ENST00000480179 SF3B2Q13435 895 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-206ENST00000480179 TAF7Q15545 349 aaPredicted RBP18.46■□□□□ 0.55
PKNOX1-206ENST00000480179 ABCC6O95255 1503 aa18.45■□□□□ 0.54
PKNOX1-206ENST00000480179 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
PKNOX1-206ENST00000480179 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
PKNOX1-206ENST00000480179 SEPT12Q8IYM1 358 aa18.45■□□□□ 0.54
PKNOX1-206ENST00000480179 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
PKNOX1-206ENST00000480179 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
PKNOX1-206ENST00000480179 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
PKNOX1-206ENST00000480179 CSB-PGBD3P0DP91 1061 aa18.43■□□□□ 0.54
PKNOX1-206ENST00000480179 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
PKNOX1-206ENST00000480179 BACH2Q9BYV9 841 aa18.43■□□□□ 0.54
PKNOX1-206ENST00000480179 KDM3BQ7LBC6 1761 aa18.43■□□□□ 0.54
PKNOX1-206ENST00000480179 ABCA3Q99758 1704 aa18.43■□□□□ 0.54
PKNOX1-206ENST00000480179 EP400Q96L91 3159 aa18.43■□□□□ 0.54
PKNOX1-206ENST00000480179 MPRIPQ6WCQ1 1025 aa18.43■□□□□ 0.54
PKNOX1-206ENST00000480179 GLI3P10071 1580 aa18.42■□□□□ 0.54
PKNOX1-206ENST00000480179 A0A0G2JS52 829 aa18.42■□□□□ 0.54
PKNOX1-206ENST00000480179 MYT1Q01538 1121 aa18.42■□□□□ 0.54
PKNOX1-206ENST00000480179 BABAM1Q9NWV8 329 aa18.42■□□□□ 0.54
PKNOX1-206ENST00000480179 CPDO75976 1380 aa18.42■□□□□ 0.54
PKNOX1-206ENST00000480179 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
PKNOX1-206ENST00000480179 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
PKNOX1-206ENST00000480179 PTPRCP08575 1304 aa18.41■□□□□ 0.54
PKNOX1-206ENST00000480179 ONECUT3O60422 494 aaPredicted RBP18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 C1orf115Q9H7X2 142 aa18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 ZBTB7BO15156 539 aaPredicted RBP18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 TEFQ10587 303 aa18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
PKNOX1-206ENST00000480179 MEGF6O75095 1541 aa18.39■□□□□ 0.53
PKNOX1-206ENST00000480179 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
PKNOX1-206ENST00000480179 G2E3Q7L622 706 aa18.39■□□□□ 0.53
PKNOX1-206ENST00000480179 BTG4Q9NY30 223 aa18.39■□□□□ 0.53
PKNOX1-206ENST00000480179 SRCAPQ6ZRS2 3230 aa18.39■□□□□ 0.53
PKNOX1-206ENST00000480179 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
PKNOX1-206ENST00000480179 NWD2Q9ULI1 1742 aa18.38■□□□□ 0.53
PKNOX1-206ENST00000480179 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
PKNOX1-206ENST00000480179 PRDM11Q9NQV5 511 aa18.37■□□□□ 0.53
PKNOX1-206ENST00000480179 SIPA1L3O60292 1781 aaPredicted RBP18.37■□□□□ 0.53
PKNOX1-206ENST00000480179 CCDC30Q5VVM6 783 aa18.37■□□□□ 0.53
PKNOX1-206ENST00000480179 INTS3Q68E01 1043 aaKnown RBP18.37■□□□□ 0.53
PKNOX1-206ENST00000480179 SOS1Q07889 1333 aaPredicted RBP18.36■□□□□ 0.53
PKNOX1-206ENST00000480179 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
PKNOX1-206ENST00000480179 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
PKNOX1-206ENST00000480179 PLCH1Q4KWH8 1693 aa18.36■□□□□ 0.53
PKNOX1-206ENST00000480179 ADAMTS7Q9UKP4 1686 aa18.36■□□□□ 0.53
PKNOX1-206ENST00000480179 KCNQ3O43525 872 aa18.35■□□□□ 0.53
PKNOX1-206ENST00000480179 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
PKNOX1-206ENST00000480179 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
PKNOX1-206ENST00000480179 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
PKNOX1-206ENST00000480179 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
PKNOX1-206ENST00000480179 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
PKNOX1-206ENST00000480179 PKD1L3Q7Z443 1732 aa18.34■□□□□ 0.53
PKNOX1-206ENST00000480179 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
PKNOX1-206ENST00000480179 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
PKNOX1-206ENST00000480179 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
PKNOX1-206ENST00000480179 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
PKNOX1-206ENST00000480179 F6X3S4 739 aa18.33■□□□□ 0.52
PKNOX1-206ENST00000480179 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
PKNOX1-206ENST00000480179 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
PKNOX1-206ENST00000480179 FLIIQ13045 1269 aa18.32■□□□□ 0.52
PKNOX1-206ENST00000480179 SLC4A10Q6U841 1118 aa18.32■□□□□ 0.52
PKNOX1-206ENST00000480179 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
PKNOX1-206ENST00000480179 BRWD3Q6RI45 1802 aa18.32■□□□□ 0.52
PKNOX1-206ENST00000480179 PARP4Q9UKK3 1724 aaKnown RBP18.31■□□□□ 0.52
PKNOX1-206ENST00000480179 COL5A2P05997 1499 aaPredicted RBP18.31■□□□□ 0.52
PKNOX1-206ENST00000480179 EIF2S2P20042 333 aaKnown RBP18.31■□□□□ 0.52
PKNOX1-206ENST00000480179 BAG6P46379 1132 aa18.31■□□□□ 0.52
PKNOX1-206ENST00000480179 FKBP5Q13451 457 aaPredicted RBP18.31■□□□□ 0.52
PKNOX1-206ENST00000480179 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
PKNOX1-206ENST00000480179 MSH5O43196 834 aa18.3■□□□□ 0.52
PKNOX1-206ENST00000480179 PHKG2P15735 406 aa18.3■□□□□ 0.52
PKNOX1-206ENST00000480179 WDR17Q8IZU2 1322 aa18.3■□□□□ 0.52
PKNOX1-206ENST00000480179 COL14A1Q05707 1796 aaKnown RBP18.3■□□□□ 0.52
PKNOX1-206ENST00000480179 SIRT2Q8IXJ6 389 aa18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 HOXB7P09629 217 aa18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 CCT4P50991 539 aaKnown RBP18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 MEIS3Q99687 375 aa18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.52
PKNOX1-206ENST00000480179 ATP10DQ9P241 1426 aa18.28■□□□□ 0.52
PKNOX1-206ENST00000480179 PLEKHG2Q9H7P9 1386 aa18.27■□□□□ 0.52
PKNOX1-206ENST00000480179 NUCB1Q02818 461 aa18.27■□□□□ 0.52
PKNOX1-206ENST00000480179 IFNL2Q8IZJ0 200 aa18.27■□□□□ 0.52
PKNOX1-206ENST00000480179 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
PKNOX1-206ENST00000480179 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms