RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
COL17A1-205ENST00000480127 SPG7Q9UQ90 795 aa9.79□□□□□ -0.84
COL17A1-205ENST00000480127 KIF20BQ96Q89 1820 aa9.78□□□□□ -0.84
COL17A1-205ENST00000480127 KIF13BQ9NQT8 1826 aa9.78□□□□□ -0.84
COL17A1-205ENST00000480127 TOMM70O94826 608 aa9.78□□□□□ -0.84
COL17A1-205ENST00000480127 TGFB2P61812 414 aa9.78□□□□□ -0.84
COL17A1-205ENST00000480127 EYA1Q99502 592 aa9.78□□□□□ -0.84
COL17A1-205ENST00000480127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
COL17A1-205ENST00000480127 TMOD3Q9NYL9 352 aa9.78□□□□□ -0.84
COL17A1-205ENST00000480127 WASHC2AQ641Q2 1341 aa9.78□□□□□ -0.84
COL17A1-205ENST00000480127 KDRP35968 1356 aa9.77□□□□□ -0.84
COL17A1-205ENST00000480127 C10orf71Q711Q0 1435 aa9.77□□□□□ -0.85
COL17A1-205ENST00000480127 A0A0G2JLW4 131 aa9.77□□□□□ -0.85
COL17A1-205ENST00000480127 PHKG2P15735 406 aa9.77□□□□□ -0.85
COL17A1-205ENST00000480127 SLC4A9Q96Q91 983 aa9.77□□□□□ -0.85
COL17A1-205ENST00000480127 NMRK2Q9NPI5 230 aa9.77□□□□□ -0.85
COL17A1-205ENST00000480127 BCS1LQ9Y276 419 aa9.77□□□□□ -0.85
COL17A1-205ENST00000480127 N4BP2Q86UW6 1770 aaPredicted RBP9.76□□□□□ -0.85
COL17A1-205ENST00000480127 DPEP1P16444 411 aa9.76□□□□□ -0.85
COL17A1-205ENST00000480127 TRAPPC3LQ5T215 181 aa9.76□□□□□ -0.85
COL17A1-205ENST00000480127 ARHGAP27Q6ZUM4 889 aa9.76□□□□□ -0.85
COL17A1-205ENST00000480127 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
COL17A1-205ENST00000480127 NLGN1Q8N2Q7 840 aa9.76□□□□□ -0.85
COL17A1-205ENST00000480127 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
COL17A1-205ENST00000480127 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
COL17A1-205ENST00000480127 ANKRD26Q9UPS8 1709 aa9.76□□□□□ -0.85
COL17A1-205ENST00000480127 KCNA3P22001 575 aa9.75□□□□□ -0.85
COL17A1-205ENST00000480127 GYS1P13807 737 aa9.74□□□□□ -0.85
COL17A1-205ENST00000480127 ADRA2BP18089 450 aa9.74□□□□□ -0.85
COL17A1-205ENST00000480127 TNNT2P45379 298 aaPredicted RBP9.74□□□□□ -0.85
COL17A1-205ENST00000480127 RC3H1Q5TC82 1133 aaKnown RBP9.74□□□□□ -0.85
COL17A1-205ENST00000480127 CCDC87Q9NVE4 849 aa9.74□□□□□ -0.85
COL17A1-205ENST00000480127 POLKQ9UBT6 870 aa9.74□□□□□ -0.85
COL17A1-205ENST00000480127 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
COL17A1-205ENST00000480127 CNTNAP4Q9C0A0 1308 aa9.74□□□□□ -0.85
COL17A1-205ENST00000480127 ZNF831Q5JPB2 1677 aa9.74□□□□□ -0.85
COL17A1-205ENST00000480127 C4AP0C0L4 1744 aa9.73□□□□□ -0.85
COL17A1-205ENST00000480127 RPS6KA4O75676 772 aa9.73□□□□□ -0.85
COL17A1-205ENST00000480127 FCHSD2O94868 740 aa9.73□□□□□ -0.85
COL17A1-205ENST00000480127 HTRA3P83110 453 aa9.73□□□□□ -0.85
COL17A1-205ENST00000480127 C9orf131Q5VYM1 1079 aa9.73□□□□□ -0.85
COL17A1-205ENST00000480127 RBM46Q8TBY0 533 aaKnown RBP9.73□□□□□ -0.85
COL17A1-205ENST00000480127 BRCA1P38398 1863 aaKnown RBP9.72□□□□□ -0.85
COL17A1-205ENST00000480127 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
COL17A1-205ENST00000480127 RFC4P35249 363 aa9.72□□□□□ -0.85
COL17A1-205ENST00000480127 EIF4G2P78344 907 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL17A1-205ENST00000480127 EIF4A2Q14240 407 aaKnown RBP9.72□□□□□ -0.85
COL17A1-205ENST00000480127 JMYQ8N9B5 988 aa9.72□□□□□ -0.85
COL17A1-205ENST00000480127 RBM42Q9BTD8 480 aaKnown RBP9.72□□□□□ -0.85
COL17A1-205ENST00000480127 PARP3Q9Y6F1 533 aa9.72□□□□□ -0.85
COL17A1-205ENST00000480127 WDR90Q96KV7 1748 aa9.72□□□□□ -0.85
COL17A1-205ENST00000480127 CLSPNQ9HAW4 1339 aa9.72□□□□□ -0.85
COL17A1-205ENST00000480127 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
COL17A1-205ENST00000480127 COL5A3P25940 1745 aaPredicted RBP9.71□□□□□ -0.85
COL17A1-205ENST00000480127 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
COL17A1-205ENST00000480127 KLRG1Q96E93 195 aa9.71□□□□□ -0.86
COL17A1-205ENST00000480127 DCAF5Q96JK2 942 aa9.71□□□□□ -0.86
COL17A1-205ENST00000480127 KCPQ6ZWJ8 1503 aa9.71□□□□□ -0.86
COL17A1-205ENST00000480127 DDR1Q08345 913 aa9.7□□□□□ -0.86
COL17A1-205ENST00000480127 FSTL1Q12841 308 aa9.7□□□□□ -0.86
COL17A1-205ENST00000480127 FKBP8Q14318 412 aa9.7□□□□□ -0.86
COL17A1-205ENST00000480127 PIM2Q9P1W9 311 aa9.7□□□□□ -0.86
COL17A1-205ENST00000480127 KDM6AO15550 1401 aaPredicted RBP9.7□□□□□ -0.86
COL17A1-205ENST00000480127 HSP90AB1P08238 724 aaKnown RBP9.69□□□□□ -0.86
COL17A1-205ENST00000480127 DALRD3Q5D0E6 543 aaKnown RBP9.69□□□□□ -0.86
COL17A1-205ENST00000480127 C16orf71Q8IYS4 520 aaPredicted RBP9.69□□□□□ -0.86
COL17A1-205ENST00000480127 RRAGCQ9HB90 399 aa9.69□□□□□ -0.86
COL17A1-205ENST00000480127 RNF181Q9P0P0 153 aa9.69□□□□□ -0.86
COL17A1-205ENST00000480127 SRP68Q9UHB9 627 aaKnown RBP9.69□□□□□ -0.86
COL17A1-205ENST00000480127 ARFGEF1Q9Y6D6 1849 aa9.69□□□□□ -0.86
COL17A1-205ENST00000480127 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
COL17A1-205ENST00000480127 KDM2BQ8NHM5 1336 aa9.68□□□□□ -0.86
COL17A1-205ENST00000480127 USP42Q9H9J4 1324 aaKnown RBP9.68□□□□□ -0.86
COL17A1-205ENST00000480127 CHRNA5P30532 468 aa9.68□□□□□ -0.86
COL17A1-205ENST00000480127 CRKLP46109 303 aaKnown RBP9.68□□□□□ -0.86
COL17A1-205ENST00000480127 CABP4P57796 275 aa9.68□□□□□ -0.86
COL17A1-205ENST00000480127 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
COL17A1-205ENST00000480127 POLRMTO00411 1230 aaKnown RBP9.67□□□□□ -0.86
COL17A1-205ENST00000480127 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
COL17A1-205ENST00000480127 TM4SF1P30408 202 aa9.67□□□□□ -0.86
COL17A1-205ENST00000480127 ZNF530Q6P9A1 599 aaPredicted RBP9.67□□□□□ -0.86
COL17A1-205ENST00000480127 TJP1Q07157 1748 aa9.66□□□□□ -0.86
COL17A1-205ENST00000480127 MTHFSP49914 203 aa9.66□□□□□ -0.86
COL17A1-205ENST00000480127 CNGB1Q14028 1251 aaPredicted RBP9.66□□□□□ -0.86
COL17A1-205ENST00000480127 AMOTQ4VCS5 1084 aa9.66□□□□□ -0.86
COL17A1-205ENST00000480127 INTS5Q6P9B9 1019 aaKnown RBP9.66□□□□□ -0.86
COL17A1-205ENST00000480127 NFATC2IPQ8NCF5 419 aa9.66□□□□□ -0.86
COL17A1-205ENST00000480127 KNSTRNQ9Y448 316 aa9.66□□□□□ -0.86
COL17A1-205ENST00000480127 ADAMTS7Q9UKP4 1686 aa9.66□□□□□ -0.86
COL17A1-205ENST00000480127 TNRC6CQ9HCJ0 1690 aaKnown RBP9.65□□□□□ -0.86
COL17A1-205ENST00000480127 HSPA5P11021 654 aaKnown RBP9.65□□□□□ -0.86
COL17A1-205ENST00000480127 PRELPP51888 382 aa9.65□□□□□ -0.86
COL17A1-205ENST00000480127 MORC1Q86VD1 984 aa9.65□□□□□ -0.86
COL17A1-205ENST00000480127 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
COL17A1-205ENST00000480127 SMC1BQ8NDV3 1235 aa9.65□□□□□ -0.86
COL17A1-205ENST00000480127 SBF1O95248 1867 aa9.64□□□□□ -0.87
COL17A1-205ENST00000480127 CAPN15O75808 1086 aa9.64□□□□□ -0.87
COL17A1-205ENST00000480127 RASSF7Q02833 373 aa9.64□□□□□ -0.87
COL17A1-205ENST00000480127 USPL1Q5W0Q7 1092 aa9.64□□□□□ -0.87
COL17A1-205ENST00000480127 PANK3Q9H999 370 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms