RNA–Protein interactions for RNA: ENST00000480113.1

CNTN4-215, Transcript of contactin 4, humanhuman

TSL 4

Gene CNTN4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-215ENST00000480113 CDK15Q96Q40 435 aa8.75□□□□□ -1.01
CNTN4-215ENST00000480113 LNPKQ9C0E8 428 aa8.75□□□□□ -1.01
CNTN4-215ENST00000480113 CUEDC1Q9NWM3 386 aaPredicted RBP8.75□□□□□ -1.01
CNTN4-215ENST00000480113 MAP4K5Q9Y4K4 846 aa8.75□□□□□ -1.01
CNTN4-215ENST00000480113 PALM3A6NDB9 673 aaPredicted RBP8.74□□□□□ -1.01
CNTN4-215ENST00000480113 FAM187AA6NFU0 413 aa8.74□□□□□ -1.01
CNTN4-215ENST00000480113 ADH1CP00326 375 aa8.74□□□□□ -1.01
CNTN4-215ENST00000480113 SMC5Q8IY18 1101 aa8.74□□□□□ -1.01
CNTN4-215ENST00000480113 TMTC2Q8N394 836 aa8.74□□□□□ -1.01
CNTN4-215ENST00000480113 TRIM52Q96A61 297 aa8.74□□□□□ -1.01
CNTN4-215ENST00000480113 TANGO6Q9C0B7 1094 aa8.74□□□□□ -1.01
CNTN4-215ENST00000480113 ANKRD33BA6NCL7 494 aa8.73□□□□□ -1.01
CNTN4-215ENST00000480113 NR5A1Q13285 461 aa8.73□□□□□ -1.01
CNTN4-215ENST00000480113 TSNAXIP1Q2TAA8 658 aa8.73□□□□□ -1.01
CNTN4-215ENST00000480113 SDE2Q6IQ49 451 aa8.73□□□□□ -1.01
CNTN4-215ENST00000480113 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
CNTN4-215ENST00000480113 KCTD15Q96SI1 283 aaPredicted RBP8.73□□□□□ -1.01
CNTN4-215ENST00000480113 J3QL48 77 aa8.72□□□□□ -1.01
CNTN4-215ENST00000480113 EIF3JO75822 258 aaKnown RBP8.72□□□□□ -1.01
CNTN4-215ENST00000480113 FSHRP23945 695 aa8.72□□□□□ -1.01
CNTN4-215ENST00000480113 FOXD4L6Q3SYB3 417 aaPredicted RBP8.72□□□□□ -1.01
CNTN4-215ENST00000480113 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
CNTN4-215ENST00000480113 FOXD4L3Q6VB84 417 aaPredicted RBP8.72□□□□□ -1.01
CNTN4-215ENST00000480113 KCNB2Q92953 911 aa8.72□□□□□ -1.01
CNTN4-215ENST00000480113 CCDC194A0A1B0GVG4 234 aa8.71□□□□□ -1.02
CNTN4-215ENST00000480113 SOWAHDA6NJG2 315 aa8.71□□□□□ -1.02
CNTN4-215ENST00000480113 DGAT1O75907 488 aa8.71□□□□□ -1.02
CNTN4-215ENST00000480113 PARNO95453 639 aaKnown RBP8.71□□□□□ -1.02
CNTN4-215ENST00000480113 ARID4AP29374 1257 aaPredicted RBP8.71□□□□□ -1.02
CNTN4-215ENST00000480113 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
CNTN4-215ENST00000480113 EGFLAMQ63HQ2 1017 aa8.71□□□□□ -1.02
CNTN4-215ENST00000480113 SGSM3Q96HU1 749 aa8.71□□□□□ -1.02
CNTN4-215ENST00000480113 SMPD1P17405 629 aa8.7□□□□□ -1.02
CNTN4-215ENST00000480113 NNTQ13423 1086 aa8.7□□□□□ -1.02
CNTN4-215ENST00000480113 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
CNTN4-215ENST00000480113 BIN2Q9UBW5 565 aaPredicted RBP8.7□□□□□ -1.02
CNTN4-215ENST00000480113 CREB3O43889 395 aa8.69□□□□□ -1.02
CNTN4-215ENST00000480113 MCCP23508 829 aa8.69□□□□□ -1.02
CNTN4-215ENST00000480113 GRM5P41594 1212 aa8.69□□□□□ -1.02
CNTN4-215ENST00000480113 RAB15P59190 212 aa8.69□□□□□ -1.02
CNTN4-215ENST00000480113 CCDC116Q8IYX3 515 aa8.69□□□□□ -1.02
CNTN4-215ENST00000480113 SPACA7Q96KW9 195 aa8.69□□□□□ -1.02
CNTN4-215ENST00000480113 PSME1Q06323 249 aa8.68□□□□□ -1.02
CNTN4-215ENST00000480113 CCDC144BQ3MJ40 725 aa8.68□□□□□ -1.02
CNTN4-215ENST00000480113 LONRF3Q496Y0 759 aa8.68□□□□□ -1.02
CNTN4-215ENST00000480113 SLFNL1Q499Z3 407 aa8.68□□□□□ -1.02
CNTN4-215ENST00000480113 CEP126Q9P2H0 1117 aa8.68□□□□□ -1.02
CNTN4-215ENST00000480113 TFIP11Q9UBB9 837 aaKnown RBP8.68□□□□□ -1.02
CNTN4-215ENST00000480113 GIGYF1O75420 1035 aaPredicted RBP8.67□□□□□ -1.02
CNTN4-215ENST00000480113 CNPY4Q8N129 248 aa8.67□□□□□ -1.02
CNTN4-215ENST00000480113 ZCRB1Q8TBF4 217 aaKnown RBP8.67□□□□□ -1.02
CNTN4-215ENST00000480113 PIK3R5Q8WYR1 880 aa8.67□□□□□ -1.02
CNTN4-215ENST00000480113 ESF1Q9H501 851 aaKnown RBP8.67□□□□□ -1.02
CNTN4-215ENST00000480113 PGPEP1Q9NXJ5 209 aa8.67□□□□□ -1.02
CNTN4-215ENST00000480113 CHPF2Q9P2E5 772 aa8.67□□□□□ -1.02
CNTN4-215ENST00000480113 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
CNTN4-215ENST00000480113 SH3BP5O60239 455 aa8.66□□□□□ -1.02
CNTN4-215ENST00000480113 INTS6LQ5JSJ4 861 aaKnown RBP8.66□□□□□ -1.02
CNTN4-215ENST00000480113 Q6ZNB5 142 aa8.66□□□□□ -1.02
CNTN4-215ENST00000480113 ALG2Q9H553 416 aa8.66□□□□□ -1.02
CNTN4-215ENST00000480113 FAN1Q9Y2M0 1017 aa8.66□□□□□ -1.02
CNTN4-215ENST00000480113 NOP58Q9Y2X3 529 aaKnown RBP8.66□□□□□ -1.02
CNTN4-215ENST00000480113 ESPNB1AK53 854 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 WDR4P57081 412 aaKnown RBP8.65□□□□□ -1.02
CNTN4-215ENST00000480113 CTC1Q2NKJ3 1217 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 CCAR1Q8IX12 1150 aaKnown RBP8.65□□□□□ -1.02
CNTN4-215ENST00000480113 NME8Q8N427 588 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 DHX38Q92620 1227 aaKnown RBP8.65□□□□□ -1.02
CNTN4-215ENST00000480113 PMM1Q92871 262 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 HPS1Q92902 700 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 SPOCK3Q9BQ16 436 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 TBX22Q9Y458 520 aa8.65□□□□□ -1.02
CNTN4-215ENST00000480113 U2SURPO15042 1029 aaKnown RBP8.64□□□□□ -1.03
CNTN4-215ENST00000480113 NR3C2P08235 984 aa8.64□□□□□ -1.03
CNTN4-215ENST00000480113 ATP2B1P20020 1258 aa8.64□□□□□ -1.03
CNTN4-215ENST00000480113 PPP1R26Q5T8A7 1209 aaPredicted RBP8.64□□□□□ -1.03
CNTN4-215ENST00000480113 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
CNTN4-215ENST00000480113 FAM9BQ8IZU0 186 aa8.64□□□□□ -1.03
CNTN4-215ENST00000480113 BRINP2Q9C0B6 783 aa8.64□□□□□ -1.03
CNTN4-215ENST00000480113 PRKAG2Q9UGJ0 569 aa8.64□□□□□ -1.03
CNTN4-215ENST00000480113 SCAMP3O14828 347 aaKnown RBP8.63□□□□□ -1.03
CNTN4-215ENST00000480113 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
CNTN4-215ENST00000480113 AVPP01185 164 aa8.63□□□□□ -1.03
CNTN4-215ENST00000480113 GTF2F1P35269 517 aaKnown RBP eCLIP8.63□□□□□ -1.03
CNTN4-215ENST00000480113 RNF187Q5TA31 235 aaPredicted RBP8.63□□□□□ -1.03
CNTN4-215ENST00000480113 ERVH48-1M5A8F1 160 aa8.62□□□□□ -1.03
CNTN4-215ENST00000480113 AXIN1O15169 862 aa8.62□□□□□ -1.03
CNTN4-215ENST00000480113 CAPN5O15484 640 aaPredicted RBP8.62□□□□□ -1.03
CNTN4-215ENST00000480113 ZIC2O95409 532 aaPredicted RBP8.62□□□□□ -1.03
CNTN4-215ENST00000480113 HDLBPQ00341 1268 aaKnown RBP8.62□□□□□ -1.03
CNTN4-215ENST00000480113 ZFYVE27Q5T4F4 411 aa8.62□□□□□ -1.03
CNTN4-215ENST00000480113 TMEM164Q5U3C3 297 aa8.62□□□□□ -1.03
CNTN4-215ENST00000480113 C9orf131Q5VYM1 1079 aa8.62□□□□□ -1.03
CNTN4-215ENST00000480113 FBXO33Q7Z6M2 555 aa8.62□□□□□ -1.03
CNTN4-215ENST00000480113 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
CNTN4-215ENST00000480113 MAFBQ9Y5Q3 323 aaPredicted RBP8.62□□□□□ -1.03
CNTN4-215ENST00000480113 TAGLNQ01995 201 aaKnown RBP8.61□□□□□ -1.03
CNTN4-215ENST00000480113 DOLKQ9UPQ8 538 aa8.61□□□□□ -1.03
CNTN4-215ENST00000480113 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms