RNA–Protein interactions for RNA: ENST00000480113.1

CNTN4-215, Transcript of contactin 4, humanhuman

TSL 4

Gene CNTN4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-215ENST00000480113 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
CNTN4-215ENST00000480113 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
CNTN4-215ENST00000480113 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
CNTN4-215ENST00000480113 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
CNTN4-215ENST00000480113 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
CNTN4-215ENST00000480113 FOXD1Q16676 465 aa17.83■□□□□ 0.44
CNTN4-215ENST00000480113 ADRA2BP18089 450 aa17.2■□□□□ 0.34
CNTN4-215ENST00000480113 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
CNTN4-215ENST00000480113 PIAS4Q8N2W9 510 aaPredicted RBP16.9■□□□□ 0.3
CNTN4-215ENST00000480113 MSH5O43196 834 aa16.52■□□□□ 0.24
CNTN4-215ENST00000480113 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
CNTN4-215ENST00000480113 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
CNTN4-215ENST00000480113 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
CNTN4-215ENST00000480113 KCNA4P22459 653 aa15.61■□□□□ 0.09
CNTN4-215ENST00000480113 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
CNTN4-215ENST00000480113 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
CNTN4-215ENST00000480113 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
CNTN4-215ENST00000480113 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
CNTN4-215ENST00000480113 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
CNTN4-215ENST00000480113 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
CNTN4-215ENST00000480113 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
CNTN4-215ENST00000480113 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
CNTN4-215ENST00000480113 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
CNTN4-215ENST00000480113 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
CNTN4-215ENST00000480113 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
CNTN4-215ENST00000480113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
CNTN4-215ENST00000480113 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
CNTN4-215ENST00000480113 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
CNTN4-215ENST00000480113 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
CNTN4-215ENST00000480113 ZBTB22O15209 634 aa14.3□□□□□ -0.12
CNTN4-215ENST00000480113 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
CNTN4-215ENST00000480113 MYCNP04198 464 aaPredicted RBP14.19□□□□□ -0.14
CNTN4-215ENST00000480113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
CNTN4-215ENST00000480113 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
CNTN4-215ENST00000480113 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
CNTN4-215ENST00000480113 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
CNTN4-215ENST00000480113 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
CNTN4-215ENST00000480113 APLP2Q06481 763 aa13.99□□□□□ -0.17
CNTN4-215ENST00000480113 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
CNTN4-215ENST00000480113 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
CNTN4-215ENST00000480113 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
CNTN4-215ENST00000480113 CAPN15O75808 1086 aa13.75□□□□□ -0.21
CNTN4-215ENST00000480113 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
CNTN4-215ENST00000480113 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
CNTN4-215ENST00000480113 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
CNTN4-215ENST00000480113 TRHP20396 242 aaPredicted RBP13.69□□□□□ -0.22
CNTN4-215ENST00000480113 POLA2Q14181 598 aa13.46□□□□□ -0.25
CNTN4-215ENST00000480113 ABCB7O75027 752 aa13.45□□□□□ -0.26
CNTN4-215ENST00000480113 DSG3P32926 999 aa13.42□□□□□ -0.26
CNTN4-215ENST00000480113 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
CNTN4-215ENST00000480113 FBLN2P98095 1184 aa13.29□□□□□ -0.28
CNTN4-215ENST00000480113 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
CNTN4-215ENST00000480113 FKBP8Q14318 412 aa13□□□□□ -0.33
CNTN4-215ENST00000480113 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
CNTN4-215ENST00000480113 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
CNTN4-215ENST00000480113 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
CNTN4-215ENST00000480113 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
CNTN4-215ENST00000480113 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
CNTN4-215ENST00000480113 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
CNTN4-215ENST00000480113 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
CNTN4-215ENST00000480113 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
CNTN4-215ENST00000480113 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
CNTN4-215ENST00000480113 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
CNTN4-215ENST00000480113 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
CNTN4-215ENST00000480113 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
CNTN4-215ENST00000480113 PROM2Q8N271 834 aa12.65□□□□□ -0.38
CNTN4-215ENST00000480113 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
CNTN4-215ENST00000480113 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
CNTN4-215ENST00000480113 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
CNTN4-215ENST00000480113 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
CNTN4-215ENST00000480113 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
CNTN4-215ENST00000480113 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
CNTN4-215ENST00000480113 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
CNTN4-215ENST00000480113 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
CNTN4-215ENST00000480113 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
CNTN4-215ENST00000480113 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
CNTN4-215ENST00000480113 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
CNTN4-215ENST00000480113 MIER1Q8N108 512 aa12.32□□□□□ -0.44
CNTN4-215ENST00000480113 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
CNTN4-215ENST00000480113 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
CNTN4-215ENST00000480113 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
CNTN4-215ENST00000480113 PRKCSHP14314 528 aaPredicted RBP12.18□□□□□ -0.46
CNTN4-215ENST00000480113 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
CNTN4-215ENST00000480113 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
CNTN4-215ENST00000480113 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
CNTN4-215ENST00000480113 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
CNTN4-215ENST00000480113 ARXQ96QS3 562 aa12.12□□□□□ -0.47
CNTN4-215ENST00000480113 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
CNTN4-215ENST00000480113 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
CNTN4-215ENST00000480113 NPM1P06748 294 aaKnown RBP eCLIP12.07□□□□□ -0.48
CNTN4-215ENST00000480113 SPOCK2Q92563 424 aa12.07□□□□□ -0.48
CNTN4-215ENST00000480113 BCANQ96GW7 911 aa12.05□□□□□ -0.48
CNTN4-215ENST00000480113 TAOK2Q9UL54 1235 aa12.02□□□□□ -0.49
CNTN4-215ENST00000480113 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
CNTN4-215ENST00000480113 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
CNTN4-215ENST00000480113 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
CNTN4-215ENST00000480113 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
CNTN4-215ENST00000480113 NUBP1P53384 320 aa11.89□□□□□ -0.51
CNTN4-215ENST00000480113 GSE1Q14687 1217 aa11.89□□□□□ -0.51
CNTN4-215ENST00000480113 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms