RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 ITPK1Q13572 414 aa9.13□□□□□ -0.95
FN1-220ENST00000480024 ZNF530Q6P9A1 599 aaPredicted RBP9.13□□□□□ -0.95
FN1-220ENST00000480024 ATG3Q9NT62 314 aa9.13□□□□□ -0.95
FN1-220ENST00000480024 GNPATO15228 680 aa9.12□□□□□ -0.95
FN1-220ENST00000480024 SSFA2P28290 1259 aa9.12□□□□□ -0.95
FN1-220ENST00000480024 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
FN1-220ENST00000480024 PLEKHO1Q53GL0 409 aaPredicted RBP9.12□□□□□ -0.95
FN1-220ENST00000480024 ZNF831Q5JPB2 1677 aa9.12□□□□□ -0.95
FN1-220ENST00000480024 VIRMAQ69YN4 1812 aaKnown RBP9.12□□□□□ -0.95
FN1-220ENST00000480024 SCN11AQ9UI33 1791 aa9.12□□□□□ -0.95
FN1-220ENST00000480024 HSP90AB1P08238 724 aaKnown RBP9.11□□□□□ -0.95
FN1-220ENST00000480024 YBX3P16989 372 aaKnown RBP eCLIP9.11□□□□□ -0.952e-63■□□□□ 9.4
FN1-220ENST00000480024 AMER1Q5JTC6 1135 aaPredicted RBP9.11□□□□□ -0.95
FN1-220ENST00000480024 C1orf141Q5JVX7 400 aa9.11□□□□□ -0.95
FN1-220ENST00000480024 SULT6B1Q6IMI4 303 aa9.11□□□□□ -0.95
FN1-220ENST00000480024 DCAF5Q96JK2 942 aa9.11□□□□□ -0.95
FN1-220ENST00000480024 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
FN1-220ENST00000480024 C4AP0C0L4 1744 aa9.11□□□□□ -0.95
FN1-220ENST00000480024 AMOTQ4VCS5 1084 aa9.1□□□□□ -0.95
FN1-220ENST00000480024 WWC3Q9ULE0 1092 aa9.1□□□□□ -0.95
FN1-220ENST00000480024 TJP1Q07157 1748 aa9.1□□□□□ -0.95
FN1-220ENST00000480024 MYH14Q7Z406 1995 aaKnown RBP9.1□□□□□ -0.95
FN1-220ENST00000480024 CICQ96RK0 1608 aaPredicted RBP9.09□□□□□ -0.95
FN1-220ENST00000480024 ERVV-2B6SEH9 535 aa9.09□□□□□ -0.95
FN1-220ENST00000480024 IL13P35225 146 aa9.09□□□□□ -0.95
FN1-220ENST00000480024 MTHFSP49914 203 aa9.09□□□□□ -0.95
FN1-220ENST00000480024 CABP4P57796 275 aa9.09□□□□□ -0.95
FN1-220ENST00000480024 CNGB1Q14028 1251 aaPredicted RBP9.09□□□□□ -0.95
FN1-220ENST00000480024 SLC4A9Q96Q91 983 aa9.09□□□□□ -0.95
FN1-220ENST00000480024 CD2APQ9Y5K6 639 aa9.09□□□□□ -0.95
FN1-220ENST00000480024 GRIN3BO60391 1043 aa9.08□□□□□ -0.96
FN1-220ENST00000480024 CC2D1BQ5T0F9 858 aaKnown RBP9.08□□□□□ -0.96
FN1-220ENST00000480024 RTCBQ9Y3I0 505 aaKnown RBP9.08□□□□□ -0.96
FN1-220ENST00000480024 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
FN1-220ENST00000480024 CNTNAP4Q9C0A0 1308 aa9.07□□□□□ -0.96
FN1-220ENST00000480024 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
FN1-220ENST00000480024 PTCD1O75127 700 aaKnown RBP9.07□□□□□ -0.96
FN1-220ENST00000480024 MMP10P09238 476 aa9.07□□□□□ -0.96
FN1-220ENST00000480024 HMOX1P09601 288 aa9.07□□□□□ -0.96
FN1-220ENST00000480024 KIAA1551Q9HCM1 1747 aa9.07□□□□□ -0.96
FN1-220ENST00000480024 MRC1P22897 1456 aa9.07□□□□□ -0.96
FN1-220ENST00000480024 TRAPPC3LQ5T215 181 aa9.06□□□□□ -0.96
FN1-220ENST00000480024 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
FN1-220ENST00000480024 COL3A1P02461 1466 aaPredicted RBP9.06□□□□□ -0.96
FN1-220ENST00000480024 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
FN1-220ENST00000480024 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
FN1-220ENST00000480024 ADAMTS7Q9UKP4 1686 aa9.05□□□□□ -0.96
FN1-220ENST00000480024 PXDNLA1KZ92 1463 aa9.05□□□□□ -0.96
FN1-220ENST00000480024 CRKLP46109 303 aaKnown RBP9.05□□□□□ -0.96
FN1-220ENST00000480024 AKAP4Q5JQC9 854 aa9.05□□□□□ -0.96
FN1-220ENST00000480024 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
FN1-220ENST00000480024 PER1O15534 1290 aaPredicted RBP9.04□□□□□ -0.96
FN1-220ENST00000480024 DIAPH1O60610 1272 aaKnown RBP9.04□□□□□ -0.96
FN1-220ENST00000480024 GIGYF1O75420 1035 aaPredicted RBP9.04□□□□□ -0.96
FN1-220ENST00000480024 RPS6KA4O75676 772 aa9.04□□□□□ -0.96
FN1-220ENST00000480024 GYS1P13807 737 aa9.04□□□□□ -0.96
FN1-220ENST00000480024 ADRA2BP18089 450 aa9.04□□□□□ -0.96
FN1-220ENST00000480024 RFC4P35249 363 aa9.04□□□□□ -0.96
FN1-220ENST00000480024 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
FN1-220ENST00000480024 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
FN1-220ENST00000480024 KCPQ6ZWJ8 1503 aa9.04□□□□□ -0.96
FN1-220ENST00000480024 UBR2Q8IWV8 1755 aa9.04□□□□□ -0.96
FN1-220ENST00000480024 ADCY9O60503 1353 aa9.03□□□□□ -0.96
FN1-220ENST00000480024 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
FN1-220ENST00000480024 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
FN1-220ENST00000480024 RNMTO43148 476 aaKnown RBP9.03□□□□□ -0.96
FN1-220ENST00000480024 C1QTNF8P60827 252 aa9.03□□□□□ -0.96
FN1-220ENST00000480024 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
FN1-220ENST00000480024 LGR6Q9HBX8 967 aa9.03□□□□□ -0.96
FN1-220ENST00000480024 SRP68Q9UHB9 627 aaKnown RBP9.03□□□□□ -0.96
FN1-220ENST00000480024 NPC1L1Q9UHC9 1359 aa9.02□□□□□ -0.97
FN1-220ENST00000480024 U2SURPO15042 1029 aaKnown RBP9.02□□□□□ -0.97
FN1-220ENST00000480024 SLC39A6Q13433 755 aa9.02□□□□□ -0.97
FN1-220ENST00000480024 MTHFSDQ2M296 383 aaKnown RBP9.02□□□□□ -0.97
FN1-220ENST00000480024 DNAJC10Q8IXB1 793 aa9.02□□□□□ -0.97
FN1-220ENST00000480024 PARP3Q9Y6F1 533 aa9.02□□□□□ -0.97
FN1-220ENST00000480024 USP42Q9H9J4 1324 aaKnown RBP9.02□□□□□ -0.97
FN1-220ENST00000480024 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
FN1-220ENST00000480024 ZNF526Q8TF50 670 aaPredicted RBP9.01□□□□□ -0.97
FN1-220ENST00000480024 CCDC87Q9NVE4 849 aa9.01□□□□□ -0.97
FN1-220ENST00000480024 BCS1LQ9Y276 419 aa9.01□□□□□ -0.97
FN1-220ENST00000480024 SIPA1L3O60292 1781 aaPredicted RBP9.01□□□□□ -0.97
FN1-220ENST00000480024 DDR1Q08345 913 aa9□□□□□ -0.97
FN1-220ENST00000480024 FKBP8Q14318 412 aa9□□□□□ -0.97
FN1-220ENST00000480024 INTS5Q6P9B9 1019 aaKnown RBP9□□□□□ -0.97
FN1-220ENST00000480024 GPBP1L1Q9HC44 474 aaPredicted RBP9□□□□□ -0.97
FN1-220ENST00000480024 AFDNP55196 1824 aaKnown RBP9□□□□□ -0.97
FN1-220ENST00000480024 ARFGEF1Q9Y6D6 1849 aa9□□□□□ -0.97
FN1-220ENST00000480024 SOS1Q07889 1333 aaPredicted RBP9□□□□□ -0.97
FN1-220ENST00000480024 COL15A1P39059 1388 aa8.99□□□□□ -0.97
FN1-220ENST00000480024 DPEP1P16444 411 aa8.99□□□□□ -0.97
FN1-220ENST00000480024 TGFB2P61812 414 aa8.99□□□□□ -0.97
FN1-220ENST00000480024 USPL1Q5W0Q7 1092 aa8.99□□□□□ -0.97
FN1-220ENST00000480024 ZBTB1Q9Y2K1 713 aa8.99□□□□□ -0.97
FN1-220ENST00000480024 SCN7AQ01118 1682 aa8.98□□□□□ -0.97
FN1-220ENST00000480024 CEP350Q5VT06 3117 aa8.98□□□□□ -0.97
FN1-220ENST00000480024 ZPR1O75312 459 aa8.98□□□□□ -0.97
FN1-220ENST00000480024 CYP19A1P11511 503 aaPredicted RBP8.98□□□□□ -0.97
FN1-220ENST00000480024 TTC5Q8N0Z6 440 aa8.98□□□□□ -0.97
FN1-220ENST00000480024 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms