RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 TNS2Q63HR2 1409 aa15.38■□□□□ 0.05
TM9SF4-206ENST00000479591 BTBD11A6QL63 1104 aa15.38■□□□□ 0.05
TM9SF4-206ENST00000479591 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
TM9SF4-206ENST00000479591 MIS18AQ9NYP9 233 aa15.38■□□□□ 0.05
TM9SF4-206ENST00000479591 EXOC5O00471 708 aa15.37■□□□□ 0.05
TM9SF4-206ENST00000479591 BRPF1P55201 1214 aaPredicted RBP15.37■□□□□ 0.05
TM9SF4-206ENST00000479591 TSPYL6Q8N831 410 aa15.37■□□□□ 0.05
TM9SF4-206ENST00000479591 SLC52A2Q9HAB3 445 aa15.37■□□□□ 0.05
TM9SF4-206ENST00000479591 SMC4Q9NTJ3 1288 aa15.37■□□□□ 0.05
TM9SF4-206ENST00000479591 USP21Q9UK80 565 aa15.37■□□□□ 0.05
TM9SF4-206ENST00000479591 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
TM9SF4-206ENST00000479591 ERVV-2B6SEH9 535 aa15.36■□□□□ 0.05
TM9SF4-206ENST00000479591 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
TM9SF4-206ENST00000479591 DDX54Q8TDD1 881 aaKnown RBP15.36■□□□□ 0.05
TM9SF4-206ENST00000479591 SSH1Q8WYL5 1049 aa15.36■□□□□ 0.05
TM9SF4-206ENST00000479591 KIF16BQ96L93 1317 aa15.36■□□□□ 0.05
TM9SF4-206ENST00000479591 PLIN1O60240 522 aa15.35■□□□□ 0.05
TM9SF4-206ENST00000479591 CANXP27824 592 aaKnown RBP15.35■□□□□ 0.05
TM9SF4-206ENST00000479591 CHMP4AQ9BY43 222 aa15.35■□□□□ 0.05
TM9SF4-206ENST00000479591 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
TM9SF4-206ENST00000479591 HOXB7P09629 217 aa15.34■□□□□ 0.05
TM9SF4-206ENST00000479591 MS4A1P11836 297 aa15.34■□□□□ 0.05
TM9SF4-206ENST00000479591 CABP4P57796 275 aa15.34■□□□□ 0.05
TM9SF4-206ENST00000479591 PDE3AQ14432 1141 aa15.34■□□□□ 0.05
TM9SF4-206ENST00000479591 DDB1Q16531 1140 aa15.34■□□□□ 0.05
TM9SF4-206ENST00000479591 EIF4A1P60842 406 aaKnown RBP15.33■□□□□ 0.04
TM9SF4-206ENST00000479591 KRT24Q2M2I5 525 aa15.33■□□□□ 0.04
TM9SF4-206ENST00000479591 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.04
TM9SF4-206ENST00000479591 BCL2L13Q9BXK5 485 aa15.33■□□□□ 0.04
TM9SF4-206ENST00000479591 AFF2P51816 1311 aa15.33■□□□□ 0.04
TM9SF4-206ENST00000479591 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
TM9SF4-206ENST00000479591 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
TM9SF4-206ENST00000479591 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
TM9SF4-206ENST00000479591 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
TM9SF4-206ENST00000479591 TOGARAM1Q9Y4F4 1720 aa15.31■□□□□ 0.04
TM9SF4-206ENST00000479591 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
TM9SF4-206ENST00000479591 CACNA1FO60840 1977 aa15.3■□□□□ 0.04
TM9SF4-206ENST00000479591 ATRNO75882 1429 aa15.3■□□□□ 0.04
TM9SF4-206ENST00000479591 CCDC30Q5VVM6 783 aa15.3■□□□□ 0.04
TM9SF4-206ENST00000479591 ARHGAP45Q92619 1136 aa15.3■□□□□ 0.04
TM9SF4-206ENST00000479591 TRPC5Q9UL62 973 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-206ENST00000479591 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
TM9SF4-206ENST00000479591 PAPPAQ13219 1627 aa15.29■□□□□ 0.04
TM9SF4-206ENST00000479591 KCNQ3O43525 872 aa15.29■□□□□ 0.04
TM9SF4-206ENST00000479591 FAM98CQ17RN3 349 aaKnown RBP15.29■□□□□ 0.04
TM9SF4-206ENST00000479591 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
TM9SF4-206ENST00000479591 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
TM9SF4-206ENST00000479591 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
TM9SF4-206ENST00000479591 NOB1Q9ULX3 412 aaKnown RBP15.29■□□□□ 0.04
TM9SF4-206ENST00000479591 THSD7AQ9UPZ6 1657 aa15.28■□□□□ 0.04
TM9SF4-206ENST00000479591 GLI3P10071 1580 aa15.28■□□□□ 0.04
TM9SF4-206ENST00000479591 C20orf194Q5TEA3 1177 aa15.28■□□□□ 0.04
TM9SF4-206ENST00000479591 GJD4Q96KN9 370 aaPredicted RBP15.28■□□□□ 0.04
TM9SF4-206ENST00000479591 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
TM9SF4-206ENST00000479591 ITGB4P16144 1822 aa15.28■□□□□ 0.04
TM9SF4-206ENST00000479591 UBR2Q8IWV8 1755 aa15.28■□□□□ 0.04
TM9SF4-206ENST00000479591 HDGFL1Q5TGJ6 251 aa15.27■□□□□ 0.04
TM9SF4-206ENST00000479591 FMNL2Q96PY5 1086 aa15.27■□□□□ 0.04
TM9SF4-206ENST00000479591 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
TM9SF4-206ENST00000479591 TMOD3Q9NYL9 352 aa15.27■□□□□ 0.04
TM9SF4-206ENST00000479591 PTPRCP08575 1304 aa15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 TRIM27P14373 513 aa15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 SLC39A6Q13433 755 aa15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 FTSJ3Q8IY81 847 aaKnown RBP15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 EXOC6Q8TAG9 804 aa15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 API5Q9BZZ5 524 aaKnown RBP15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 DOT1LQ8TEK3 1739 aa15.26■□□□□ 0.03
TM9SF4-206ENST00000479591 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
TM9SF4-206ENST00000479591 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
TM9SF4-206ENST00000479591 ONECUT3O60422 494 aaPredicted RBP15.24■□□□□ 0.03
TM9SF4-206ENST00000479591 SNRPA1P09661 255 aaKnown RBP15.24■□□□□ 0.03
TM9SF4-206ENST00000479591 AAMPQ13685 434 aa15.24■□□□□ 0.03
TM9SF4-206ENST00000479591 MARCH10Q8NA82 808 aaPredicted RBP15.24■□□□□ 0.03
TM9SF4-206ENST00000479591 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
TM9SF4-206ENST00000479591 BCL9O00512 1426 aa15.24■□□□□ 0.03
TM9SF4-206ENST00000479591 LAMB4A4D0S4 1761 aa15.24■□□□□ 0.03
TM9SF4-206ENST00000479591 C5P01031 1676 aa15.23■□□□□ 0.03
TM9SF4-206ENST00000479591 ZNF496Q96IT1 587 aaPredicted RBP15.23■□□□□ 0.03
TM9SF4-206ENST00000479591 QTRT2Q9H974 415 aaKnown RBP15.23■□□□□ 0.03
TM9SF4-206ENST00000479591 KCPQ6ZWJ8 1503 aa15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 A0A0G2JS52 829 aa15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 MYT1Q01538 1121 aa15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 MVPQ14764 893 aaKnown RBP15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 ZNF772Q68DY9 489 aaPredicted RBP15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 PIGBQ92521 554 aa15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 CLUAP1Q96AJ1 413 aa15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 DBF4Q9UBU7 674 aaPredicted RBP15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 COG6Q9Y2V7 657 aa15.22■□□□□ 0.03
TM9SF4-206ENST00000479591 ABCC4O15439 1325 aa15.21■□□□□ 0.03
TM9SF4-206ENST00000479591 RLBP1P12271 317 aa15.21■□□□□ 0.03
TM9SF4-206ENST00000479591 TNNQ9UQP3 1299 aa15.21■□□□□ 0.03
TM9SF4-206ENST00000479591 VSIG10Q8N0Z9 540 aa15.2■□□□□ 0.02
TM9SF4-206ENST00000479591 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
TM9SF4-206ENST00000479591 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
TM9SF4-206ENST00000479591 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
TM9SF4-206ENST00000479591 ERBB4Q15303 1308 aa15.19■□□□□ 0.02
TM9SF4-206ENST00000479591 PRIM1P49642 420 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms