RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ZNF358Q9NW07 568 aa10.49□□□□□ -0.73
CCDC58-204ENST00000479414 M0R2N6 131 aa10.48□□□□□ -0.73
CCDC58-204ENST00000479414 GPC1P35052 558 aa10.48□□□□□ -0.73
CCDC58-204ENST00000479414 DPYDQ12882 1025 aa10.48□□□□□ -0.73
CCDC58-204ENST00000479414 NLRP3Q96P20 1036 aa10.48□□□□□ -0.73
CCDC58-204ENST00000479414 SLC4A9Q96Q91 983 aa10.48□□□□□ -0.73
CCDC58-204ENST00000479414 NOVA2Q9UNW9 492 aaKnown RBP10.48□□□□□ -0.73
CCDC58-204ENST00000479414 RBM19Q9Y4C8 960 aaKnown RBP10.48□□□□□ -0.73
CCDC58-204ENST00000479414 RNF144AP50876 292 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-204ENST00000479414 SEC13P55735 322 aa10.47□□□□□ -0.73
CCDC58-204ENST00000479414 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC58-204ENST00000479414 SENP2Q9HC62 589 aa10.47□□□□□ -0.73
CCDC58-204ENST00000479414 ZMIZ1Q9ULJ6 1067 aa10.47□□□□□ -0.73
CCDC58-204ENST00000479414 SOS2Q07890 1332 aaPredicted RBP10.47□□□□□ -0.73
CCDC58-204ENST00000479414 BACH1O14867 736 aa10.46□□□□□ -0.73
CCDC58-204ENST00000479414 CTSOP43234 321 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-204ENST00000479414 FOXD4L5Q5VV16 416 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-204ENST00000479414 POLMQ9NP87 494 aaPredicted RBP10.46□□□□□ -0.73
CCDC58-204ENST00000479414 ACIN1Q9UKV3 1341 aaKnown RBP10.46□□□□□ -0.73
CCDC58-204ENST00000479414 CENPCQ03188 943 aa10.45□□□□□ -0.74
CCDC58-204ENST00000479414 FAM200AQ8TCP9 573 aa10.45□□□□□ -0.74
CCDC58-204ENST00000479414 KIFC2Q96AC6 838 aa10.45□□□□□ -0.74
CCDC58-204ENST00000479414 FHDC1Q9C0D6 1143 aaPredicted RBP10.45□□□□□ -0.74
CCDC58-204ENST00000479414 TTLL8A6PVC2 850 aa10.44□□□□□ -0.74
CCDC58-204ENST00000479414 SFI1A8K8P3 1242 aa10.44□□□□□ -0.74
CCDC58-204ENST00000479414 SMTNP53814 917 aa10.44□□□□□ -0.74
CCDC58-204ENST00000479414 MTFR1Q15390 333 aa10.44□□□□□ -0.74
CCDC58-204ENST00000479414 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
CCDC58-204ENST00000479414 GMPR2Q9P2T1 348 aaKnown RBP10.44□□□□□ -0.74
CCDC58-204ENST00000479414 SERTAD1Q9UHV2 236 aa10.44□□□□□ -0.74
CCDC58-204ENST00000479414 EPHA4P54764 986 aa10.43□□□□□ -0.74
CCDC58-204ENST00000479414 TLR1Q15399 786 aa10.43□□□□□ -0.74
CCDC58-204ENST00000479414 RNF217Q8TC41 542 aa10.43□□□□□ -0.74
CCDC58-204ENST00000479414 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
CCDC58-204ENST00000479414 GRIP2Q9C0E4 1043 aa10.43□□□□□ -0.74
CCDC58-204ENST00000479414 A6NJY4 79 aa10.41□□□□□ -0.74
CCDC58-204ENST00000479414 TMEM164Q5U3C3 297 aa10.41□□□□□ -0.74
CCDC58-204ENST00000479414 TSEN2Q8NCE0 465 aaKnown RBP10.41□□□□□ -0.74
CCDC58-204ENST00000479414 FOXK2Q01167 660 aa10.4□□□□□ -0.74
CCDC58-204ENST00000479414 FAM69CQ0P6D2 419 aa10.4□□□□□ -0.74
CCDC58-204ENST00000479414 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
CCDC58-204ENST00000479414 TNS4Q8IZW8 715 aa10.4□□□□□ -0.74
CCDC58-204ENST00000479414 ZSCAN10Q96SZ4 725 aaPredicted RBP10.4□□□□□ -0.74
CCDC58-204ENST00000479414 SCHIP1Q9P0W5 487 aaPredicted RBP10.4□□□□□ -0.74
CCDC58-204ENST00000479414 DNMT3LQ9UJW3 386 aa10.4□□□□□ -0.74
CCDC58-204ENST00000479414 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
CCDC58-204ENST00000479414 CDK2AP1O14519 115 aa10.39□□□□□ -0.75
CCDC58-204ENST00000479414 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
CCDC58-204ENST00000479414 SWI5Q1ZZU3 235 aa10.39□□□□□ -0.75
CCDC58-204ENST00000479414 PPARGC1BQ86YN6 1023 aaKnown RBP10.39□□□□□ -0.75
CCDC58-204ENST00000479414 IQSEC3Q9UPP2 1182 aaPredicted RBP10.39□□□□□ -0.75
CCDC58-204ENST00000479414 MAN1A2O60476 641 aa10.38□□□□□ -0.75
CCDC58-204ENST00000479414 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
CCDC58-204ENST00000479414 TMEM88BA6NKF7 163 aa10.37□□□□□ -0.75
CCDC58-204ENST00000479414 FIGNL2A6NMB9 653 aa10.37□□□□□ -0.75
CCDC58-204ENST00000479414 SNRPBP14678 240 aaKnown RBP10.37□□□□□ -0.75
CCDC58-204ENST00000479414 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.37□□□□□ -0.75
CCDC58-204ENST00000479414 ZNF295-AS1Q8N0V1 137 aa10.37□□□□□ -0.75
CCDC58-204ENST00000479414 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
CCDC58-204ENST00000479414 USTQ9Y2C2 406 aa10.37□□□□□ -0.75
CCDC58-204ENST00000479414 POTECB2RU33 542 aa10.36□□□□□ -0.75
CCDC58-204ENST00000479414 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
CCDC58-204ENST00000479414 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
CCDC58-204ENST00000479414 WDR44Q5JSH3 913 aa10.36□□□□□ -0.75
CCDC58-204ENST00000479414 TMEM214Q6NUQ4 689 aaKnown RBP10.36□□□□□ -0.75
CCDC58-204ENST00000479414 RETREG2Q8NC44 543 aa10.36□□□□□ -0.75
CCDC58-204ENST00000479414 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
CCDC58-204ENST00000479414 USP3Q9Y6I4 520 aa10.36□□□□□ -0.75
CCDC58-204ENST00000479414 GNASQ5JWF2 1037 aa10.35□□□□□ -0.75
CCDC58-204ENST00000479414 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
CCDC58-204ENST00000479414 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
CCDC58-204ENST00000479414 CLP1Q92989 425 aaKnown RBP10.35□□□□□ -0.75
CCDC58-204ENST00000479414 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
CCDC58-204ENST00000479414 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
CCDC58-204ENST00000479414 POU4F2Q12837 409 aa10.34□□□□□ -0.75
CCDC58-204ENST00000479414 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
CCDC58-204ENST00000479414 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
CCDC58-204ENST00000479414 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
CCDC58-204ENST00000479414 TSPAN10Q9H1Z9 355 aaPredicted RBP10.34□□□□□ -0.75
CCDC58-204ENST00000479414 WEE1P30291 646 aa10.33□□□□□ -0.76
CCDC58-204ENST00000479414 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
CCDC58-204ENST00000479414 C21orf2O43822 256 aa10.32□□□□□ -0.76
CCDC58-204ENST00000479414 IGFBP4P22692 258 aa10.32□□□□□ -0.76
CCDC58-204ENST00000479414 PDE4CQ08493 712 aa10.32□□□□□ -0.76
CCDC58-204ENST00000479414 C4orf17Q53FE4 359 aa10.32□□□□□ -0.76
CCDC58-204ENST00000479414 ATAD2Q6PL18 1390 aa10.31□□□□□ -0.76
CCDC58-204ENST00000479414 RHOQP17081 205 aa10.31□□□□□ -0.76
CCDC58-204ENST00000479414 PSMA6P60900 246 aaKnown RBP10.31□□□□□ -0.76
CCDC58-204ENST00000479414 TEAD4Q15561 434 aa10.31□□□□□ -0.76
CCDC58-204ENST00000479414 OCLNQ16625 522 aa10.31□□□□□ -0.76
CCDC58-204ENST00000479414 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
CCDC58-204ENST00000479414 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
CCDC58-204ENST00000479414 SCG3Q8WXD2 468 aaKnown RBP10.31□□□□□ -0.76
CCDC58-204ENST00000479414 SLAIN2Q9P270 581 aa10.31□□□□□ -0.76
CCDC58-204ENST00000479414 LGR5O75473 907 aa10.3□□□□□ -0.76
CCDC58-204ENST00000479414 TBCELQ5QJ74 424 aa10.3□□□□□ -0.76
CCDC58-204ENST00000479414 ZDHHC1Q8WTX9 485 aa10.3□□□□□ -0.76
CCDC58-204ENST00000479414 SENP3-EIF4A1A0A087X0R7 540 aa10.29□□□□□ -0.76
CCDC58-204ENST00000479414 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
CCDC58-204ENST00000479414 PTSQ03393 145 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms