RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 SMG6Q86US8 1419 aaKnown RBP13.99□□□□□ -0.17
CDK11A-216ENST00000479362 PPP2R1AP30153 589 aa13.99□□□□□ -0.17
CDK11A-216ENST00000479362 SOX12O15370 315 aa13.98□□□□□ -0.17
CDK11A-216ENST00000479362 IL2RBP14784 551 aa13.98□□□□□ -0.17
CDK11A-216ENST00000479362 KCNH5Q8NCM2 988 aa13.98□□□□□ -0.17
CDK11A-216ENST00000479362 KIAA1551Q9HCM1 1747 aa13.98□□□□□ -0.17
CDK11A-216ENST00000479362 TAF1LQ8IZX4 1826 aa13.97□□□□□ -0.17
CDK11A-216ENST00000479362 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
CDK11A-216ENST00000479362 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
CDK11A-216ENST00000479362 TOGARAM1Q9Y4F4 1720 aa13.97□□□□□ -0.17
CDK11A-216ENST00000479362 ERBB3P21860 1342 aa13.96□□□□□ -0.17
CDK11A-216ENST00000479362 FSTL1Q12841 308 aa13.96□□□□□ -0.17
CDK11A-216ENST00000479362 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
CDK11A-216ENST00000479362 FBLN1P23142 703 aa13.95□□□□□ -0.18
CDK11A-216ENST00000479362 RRS1Q15050 365 aaKnown RBP13.95□□□□□ -0.18
CDK11A-216ENST00000479362 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
CDK11A-216ENST00000479362 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
CDK11A-216ENST00000479362 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
CDK11A-216ENST00000479362 MAP3K19Q56UN5 1328 aa13.94□□□□□ -0.18
CDK11A-216ENST00000479362 NLRP2Q9NX02 1062 aa13.94□□□□□ -0.18
CDK11A-216ENST00000479362 POLKQ9UBT6 870 aa13.94□□□□□ -0.18
CDK11A-216ENST00000479362 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
CDK11A-216ENST00000479362 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
CDK11A-216ENST00000479362 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
CDK11A-216ENST00000479362 MTHFSP49914 203 aa13.93□□□□□ -0.18
CDK11A-216ENST00000479362 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
CDK11A-216ENST00000479362 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
CDK11A-216ENST00000479362 N4BP2Q86UW6 1770 aaPredicted RBP13.93□□□□□ -0.18
CDK11A-216ENST00000479362 FLT4P35916 1363 aa13.93□□□□□ -0.18
CDK11A-216ENST00000479362 KIF24Q5T7B8 1368 aa13.93□□□□□ -0.18
CDK11A-216ENST00000479362 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
CDK11A-216ENST00000479362 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
CDK11A-216ENST00000479362 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
CDK11A-216ENST00000479362 SYTL4Q96C24 671 aaPredicted RBP13.92□□□□□ -0.18
CDK11A-216ENST00000479362 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
CDK11A-216ENST00000479362 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
CDK11A-216ENST00000479362 C10orf71Q711Q0 1435 aa13.91□□□□□ -0.18
CDK11A-216ENST00000479362 AMPHP49418 695 aa13.91□□□□□ -0.18
CDK11A-216ENST00000479362 BRCA1P38398 1863 aaKnown RBP13.91□□□□□ -0.18
CDK11A-216ENST00000479362 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
CDK11A-216ENST00000479362 CCDC184Q52MB2 194 aa13.9□□□□□ -0.18
CDK11A-216ENST00000479362 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.18
CDK11A-216ENST00000479362 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
CDK11A-216ENST00000479362 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
CDK11A-216ENST00000479362 PXDNLA1KZ92 1463 aa13.9□□□□□ -0.18
CDK11A-216ENST00000479362 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
CDK11A-216ENST00000479362 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
CDK11A-216ENST00000479362 INSRP06213 1382 aa13.89□□□□□ -0.19
CDK11A-216ENST00000479362 HOXC9P31274 260 aa13.88□□□□□ -0.19
CDK11A-216ENST00000479362 FLAD1Q8NFF5 587 aa13.87□□□□□ -0.19
CDK11A-216ENST00000479362 IP6K1Q92551 441 aa13.87□□□□□ -0.19
CDK11A-216ENST00000479362 RGPD2P0DJD1 1756 aa13.86□□□□□ -0.19
CDK11A-216ENST00000479362 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
CDK11A-216ENST00000479362 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
CDK11A-216ENST00000479362 FAM161AQ3B820 660 aa13.86□□□□□ -0.19
CDK11A-216ENST00000479362 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
CDK11A-216ENST00000479362 ANKRD24Q8TF21 1146 aa13.86□□□□□ -0.19
CDK11A-216ENST00000479362 DIAPH1O60610 1272 aaKnown RBP13.85□□□□□ -0.19
CDK11A-216ENST00000479362 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
CDK11A-216ENST00000479362 WDR43Q15061 677 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDK11A-216ENST00000479362 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
CDK11A-216ENST00000479362 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
CDK11A-216ENST00000479362 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
CDK11A-216ENST00000479362 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
CDK11A-216ENST00000479362 TNRC18O15417 2968 aaPredicted RBP13.83□□□□□ -0.19
CDK11A-216ENST00000479362 SBF1O95248 1867 aa13.83□□□□□ -0.2
CDK11A-216ENST00000479362 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.2
CDK11A-216ENST00000479362 RRAGCQ9HB90 399 aa13.83□□□□□ -0.2
CDK11A-216ENST00000479362 NUDCQ9Y266 331 aa13.83□□□□□ -0.2
CDK11A-216ENST00000479362 U2SURPO15042 1029 aaKnown RBP13.82□□□□□ -0.2
CDK11A-216ENST00000479362 IL13P35225 146 aa13.82□□□□□ -0.2
CDK11A-216ENST00000479362 PNISRQ8TF01 805 aaKnown RBP13.82□□□□□ -0.2
CDK11A-216ENST00000479362 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
CDK11A-216ENST00000479362 KDM2BQ8NHM5 1336 aa13.82□□□□□ -0.2
CDK11A-216ENST00000479362 FAM9BQ8IZU0 186 aa13.81□□□□□ -0.2
CDK11A-216ENST00000479362 MEGF6O75095 1541 aa13.8□□□□□ -0.2
CDK11A-216ENST00000479362 PHF14O94880 888 aa13.8□□□□□ -0.2
CDK11A-216ENST00000479362 PALLDQ8WX93 1383 aa13.8□□□□□ -0.2
CDK11A-216ENST00000479362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
CDK11A-216ENST00000479362 A0A0G2JLW4 131 aa13.79□□□□□ -0.2
CDK11A-216ENST00000479362 FOXN1O15353 648 aa13.79□□□□□ -0.2
CDK11A-216ENST00000479362 U2AF1L5P0DN76 240 aaPredicted RBP13.79□□□□□ -0.2
CDK11A-216ENST00000479362 U2AF1Q01081 240 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDK11A-216ENST00000479362 TGFB2P61812 414 aa13.78□□□□□ -0.2
CDK11A-216ENST00000479362 AK7Q96M32 723 aa13.78□□□□□ -0.2
CDK11A-216ENST00000479362 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
CDK11A-216ENST00000479362 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
CDK11A-216ENST00000479362 ITGB4P16144 1822 aa13.78□□□□□ -0.2
CDK11A-216ENST00000479362 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
CDK11A-216ENST00000479362 EYA1Q99502 592 aa13.77□□□□□ -0.21
CDK11A-216ENST00000479362 ADAMTS8Q9UP79 889 aa13.77□□□□□ -0.21
CDK11A-216ENST00000479362 KDRP35968 1356 aa13.76□□□□□ -0.21
CDK11A-216ENST00000479362 FCHSD2O94868 740 aa13.76□□□□□ -0.21
CDK11A-216ENST00000479362 MMP10P09238 476 aa13.76□□□□□ -0.21
CDK11A-216ENST00000479362 SSFA2P28290 1259 aa13.76□□□□□ -0.21
CDK11A-216ENST00000479362 HMOX1P09601 288 aa13.75□□□□□ -0.21
CDK11A-216ENST00000479362 DPEP1P16444 411 aa13.75□□□□□ -0.21
CDK11A-216ENST00000479362 SULT6B1Q6IMI4 303 aa13.75□□□□□ -0.21
CDK11A-216ENST00000479362 USHBP1Q8N6Y0 703 aa13.75□□□□□ -0.21
CDK11A-216ENST00000479362 RNF181Q9P0P0 153 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms