RNA–Protein interactions for RNA: ENST00000478640.6

CCT3-212, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 583 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-212ENST00000478640 CASZ1Q86V15 1759 aa15.3■□□□□ 0.04
CCT3-212ENST00000478640 NFATC2IPQ8NCF5 419 aa15.3■□□□□ 0.04
CCT3-212ENST00000478640 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
CCT3-212ENST00000478640 PTCD1O75127 700 aaKnown RBP15.29■□□□□ 0.04
CCT3-212ENST00000478640 ITPK1Q13572 414 aa15.29■□□□□ 0.04
CCT3-212ENST00000478640 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
CCT3-212ENST00000478640 PER1O15534 1290 aaPredicted RBP15.28■□□□□ 0.04
CCT3-212ENST00000478640 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
CCT3-212ENST00000478640 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
CCT3-212ENST00000478640 U2SURPO15042 1029 aaKnown RBP15.27■□□□□ 0.04
CCT3-212ENST00000478640 DIAPH1O60610 1272 aaKnown RBP15.27■□□□□ 0.04
CCT3-212ENST00000478640 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
CCT3-212ENST00000478640 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
CCT3-212ENST00000478640 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
CCT3-212ENST00000478640 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
CCT3-212ENST00000478640 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
CCT3-212ENST00000478640 SSFA2P28290 1259 aa15.24■□□□□ 0.03
CCT3-212ENST00000478640 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
CCT3-212ENST00000478640 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
CCT3-212ENST00000478640 MAP2P11137 1827 aaKnown RBP15.22■□□□□ 0.03
CCT3-212ENST00000478640 RFC4P35249 363 aa15.22■□□□□ 0.03
CCT3-212ENST00000478640 AKAP4Q5JQC9 854 aa15.22■□□□□ 0.03
CCT3-212ENST00000478640 SLC4A9Q96Q91 983 aa15.22■□□□□ 0.03
CCT3-212ENST00000478640 CD2APQ9Y5K6 639 aa15.22■□□□□ 0.03
CCT3-212ENST00000478640 MTHFSDQ2M296 383 aaKnown RBP15.21■□□□□ 0.03
CCT3-212ENST00000478640 ZNF784Q8NCA9 323 aaPredicted RBP15.21■□□□□ 0.03
CCT3-212ENST00000478640 ARHGEF1Q92888 912 aaKnown RBP15.21■□□□□ 0.03
CCT3-212ENST00000478640 MAP3K5Q99683 1374 aa15.21■□□□□ 0.02
CCT3-212ENST00000478640 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
CCT3-212ENST00000478640 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.026e-12■■■□□ 18.7
CCT3-212ENST00000478640 MMP10P09238 476 aa15.19■□□□□ 0.02
CCT3-212ENST00000478640 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
CCT3-212ENST00000478640 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
CCT3-212ENST00000478640 RNMTO43148 476 aaKnown RBP15.18■□□□□ 0.02
CCT3-212ENST00000478640 RPS6KA4O75676 772 aa15.18■□□□□ 0.02
CCT3-212ENST00000478640 NLGN1Q8N2Q7 840 aa15.18■□□□□ 0.02
CCT3-212ENST00000478640 SLC52A2Q9HAB3 445 aa15.18■□□□□ 0.02
CCT3-212ENST00000478640 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
CCT3-212ENST00000478640 LY75O60449 1722 aa15.17■□□□□ 0.02
CCT3-212ENST00000478640 CRKLP46109 303 aaKnown RBP15.17■□□□□ 0.02
CCT3-212ENST00000478640 RC3H1Q5TC82 1133 aaKnown RBP15.17■□□□□ 0.02
CCT3-212ENST00000478640 PKD1L3Q7Z443 1732 aa15.15■□□□□ 0.02
CCT3-212ENST00000478640 ANKRD26Q9UPS8 1709 aa15.15■□□□□ 0.02
CCT3-212ENST00000478640 KDRP35968 1356 aa15.15■□□□□ 0.02
CCT3-212ENST00000478640 PLEKHG2Q9H7P9 1386 aa15.15■□□□□ 0.02
CCT3-212ENST00000478640 DNAJC10Q8IXB1 793 aa15.15■□□□□ 0.02
CCT3-212ENST00000478640 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
CCT3-212ENST00000478640 PARP3Q9Y6F1 533 aa15.15■□□□□ 0.02
CCT3-212ENST00000478640 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
CCT3-212ENST00000478640 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
CCT3-212ENST00000478640 U2AF1L5P0DN76 240 aaPredicted RBP15.14■□□□□ 0.01
CCT3-212ENST00000478640 U2AF1Q01081 240 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCT3-212ENST00000478640 TTC5Q8N0Z6 440 aa15.14■□□□□ 0.01
CCT3-212ENST00000478640 SRP68Q9UHB9 627 aaKnown RBP15.14■□□□□ 0.01
CCT3-212ENST00000478640 C4BP0C0L5 1744 aa15.14■□□□□ 0.01
CCT3-212ENST00000478640 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
CCT3-212ENST00000478640 GNAT3A8MTJ3 354 aa15.13■□□□□ 0.01
CCT3-212ENST00000478640 ZPR1O75312 459 aa15.13■□□□□ 0.01
CCT3-212ENST00000478640 TEFQ10587 303 aa15.13■□□□□ 0.01
CCT3-212ENST00000478640 C5P01031 1676 aa15.12■□□□□ 0.01
CCT3-212ENST00000478640 GYS1P13807 737 aa15.12■□□□□ 0.01
CCT3-212ENST00000478640 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
CCT3-212ENST00000478640 PRKAR2BP31323 418 aa15.12■□□□□ 0.01
CCT3-212ENST00000478640 INTS5Q6P9B9 1019 aaKnown RBP15.12■□□□□ 0.01
CCT3-212ENST00000478640 PHACTR3Q96KR7 559 aa15.12■□□□□ 0.01
CCT3-212ENST00000478640 CCDC87Q9NVE4 849 aa15.12■□□□□ 0.01
CCT3-212ENST00000478640 CANXP27824 592 aaKnown RBP15.11■□□□□ 0.01
CCT3-212ENST00000478640 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
CCT3-212ENST00000478640 ZNF526Q8TF50 670 aaPredicted RBP15.11■□□□□ 0.01
CCT3-212ENST00000478640 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
CCT3-212ENST00000478640 ITGB4P16144 1822 aa15.1■□□□□ 0.01
CCT3-212ENST00000478640 FKBP8Q14318 412 aa15.1■□□□□ 0.01
CCT3-212ENST00000478640 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
CCT3-212ENST00000478640 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
CCT3-212ENST00000478640 NPC1L1Q9UHC9 1359 aa15.1■□□□□ 0.01
CCT3-212ENST00000478640 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
CCT3-212ENST00000478640 USPL1Q5W0Q7 1092 aa15.09■□□□□ 0.01
CCT3-212ENST00000478640 STARD3NLO95772 234 aa15.08■□□□□ 0
CCT3-212ENST00000478640 DPEP1P16444 411 aa15.08■□□□□ 0
CCT3-212ENST00000478640 TGFB2P61812 414 aa15.08■□□□□ 0
CCT3-212ENST00000478640 ARHGAP27Q6ZUM4 889 aa15.08■□□□□ 0
CCT3-212ENST00000478640 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
CCT3-212ENST00000478640 BTBD11A6QL63 1104 aa15.07■□□□□ 0
CCT3-212ENST00000478640 GIGYF1O75420 1035 aaPredicted RBP15.07■□□□□ 0
CCT3-212ENST00000478640 NPM2Q86SE8 214 aaKnown RBP15.07■□□□□ 0
CCT3-212ENST00000478640 TUBGCP6Q96RT7 1819 aa15.07■□□□□ 0
CCT3-212ENST00000478640 QSER1Q2KHR3 1735 aa15.06■□□□□ 0
CCT3-212ENST00000478640 FCHSD2O94868 740 aa15.06■□□□□ 0
CCT3-212ENST00000478640 NEFMP07197 916 aa15.06■□□□□ 0
CCT3-212ENST00000478640 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
CCT3-212ENST00000478640 ZNF496Q96IT1 587 aaPredicted RBP15.06■□□□□ 0
CCT3-212ENST00000478640 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
CCT3-212ENST00000478640 USP42Q9H9J4 1324 aaKnown RBP15.06■□□□□ 0
CCT3-212ENST00000478640 C1QTNF8P60827 252 aa15.05■□□□□ -0
CCT3-212ENST00000478640 ZNF790Q6PG37 636 aa15.05■□□□□ -0
CCT3-212ENST00000478640 MCM10Q7L590 875 aa15.05■□□□□ -0
CCT3-212ENST00000478640 VSIG10Q8N0Z9 540 aa15.05■□□□□ -0
CCT3-212ENST00000478640 ZBTB1Q9Y2K1 713 aa15.05■□□□□ -0
CCT3-212ENST00000478640 KCNQ3O43525 872 aa15.04■□□□□ -0
CCT3-212ENST00000478640 DDR1Q08345 913 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms