RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 RNF144AP50876 292 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-210ENST00000478451 SRSF11Q05519 484 aaKnown RBP7.49□□□□□ -1.21
GPNMB-210ENST00000478451 USP4Q13107 963 aa7.49□□□□□ -1.21
GPNMB-210ENST00000478451 MAP7D1Q3KQU3 841 aa7.49□□□□□ -1.21
GPNMB-210ENST00000478451 SV2AQ7L0J3 742 aa7.49□□□□□ -1.21
GPNMB-210ENST00000478451 CCDC155Q8N6L0 562 aa7.49□□□□□ -1.21
GPNMB-210ENST00000478451 RAB6BQ9NRW1 208 aa7.49□□□□□ -1.21
GPNMB-210ENST00000478451 GNRH1P01148 92 aa7.48□□□□□ -1.21
GPNMB-210ENST00000478451 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-210ENST00000478451 GPC1P35052 558 aa7.48□□□□□ -1.21
GPNMB-210ENST00000478451 CLN3Q13286 438 aa7.48□□□□□ -1.21
GPNMB-210ENST00000478451 LYSMD3Q7Z3D4 306 aa7.48□□□□□ -1.21
GPNMB-210ENST00000478451 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
GPNMB-210ENST00000478451 NLRP3Q96P20 1036 aa7.48□□□□□ -1.21
GPNMB-210ENST00000478451 PODNQ7Z5L7 613 aa7.47□□□□□ -1.21
GPNMB-210ENST00000478451 FNBP4Q8N3X1 1017 aaPredicted RBP7.47□□□□□ -1.21
GPNMB-210ENST00000478451 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
GPNMB-210ENST00000478451 SLC35F4A4IF30 521 aa7.46□□□□□ -1.22
GPNMB-210ENST00000478451 IL2RAP01589 272 aa7.46□□□□□ -1.22
GPNMB-210ENST00000478451 SKIP12755 728 aa7.46□□□□□ -1.22
GPNMB-210ENST00000478451 ITGA6P23229 1130 aa7.46□□□□□ -1.22
GPNMB-210ENST00000478451 NFATC2IPQ8NCF5 419 aa7.46□□□□□ -1.22
GPNMB-210ENST00000478451 TIMELESSQ9UNS1 1208 aa7.46□□□□□ -1.22
GPNMB-210ENST00000478451 CNTNAP5Q8WYK1 1306 aa7.46□□□□□ -1.22
GPNMB-210ENST00000478451 A6NJR5 290 aa7.45□□□□□ -1.22
GPNMB-210ENST00000478451 SLC27A3Q5K4L6 730 aa7.45□□□□□ -1.22
GPNMB-210ENST00000478451 PRICKLE2Q7Z3G6 844 aa7.45□□□□□ -1.22
GPNMB-210ENST00000478451 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
GPNMB-210ENST00000478451 CNKSR1Q969H4 720 aa7.45□□□□□ -1.22
GPNMB-210ENST00000478451 SENP3-EIF4A1A0A087X0R7 540 aa7.44□□□□□ -1.22
GPNMB-210ENST00000478451 RHOQP17081 205 aa7.44□□□□□ -1.22
GPNMB-210ENST00000478451 EML3Q32P44 896 aa7.44□□□□□ -1.22
GPNMB-210ENST00000478451 ESCO1Q5FWF5 840 aa7.44□□□□□ -1.22
GPNMB-210ENST00000478451 HDGFL1Q5TGJ6 251 aa7.44□□□□□ -1.22
GPNMB-210ENST00000478451 ESYT1Q9BSJ8 1104 aa7.44□□□□□ -1.22
GPNMB-210ENST00000478451 CCDC180Q9P1Z9 1646 aa7.43□□□□□ -1.22
GPNMB-210ENST00000478451 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
GPNMB-210ENST00000478451 STAU1O95793 577 aaKnown RBP7.43□□□□□ -1.22
GPNMB-210ENST00000478451 GLMNQ92990 594 aa7.43□□□□□ -1.22
GPNMB-210ENST00000478451 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
GPNMB-210ENST00000478451 GRIP2Q9C0E4 1043 aa7.43□□□□□ -1.22
GPNMB-210ENST00000478451 ETNK1Q9HBU6 452 aa7.43□□□□□ -1.22
GPNMB-210ENST00000478451 NCOA4Q13772 614 aa7.42□□□□□ -1.22
GPNMB-210ENST00000478451 ALYREFQ86V81 257 aaKnown RBP7.42□□□□□ -1.22
GPNMB-210ENST00000478451 XAGE2Q96GT9 111 aa7.42□□□□□ -1.22
GPNMB-210ENST00000478451 HRH3Q9Y5N1 445 aa7.42□□□□□ -1.22
GPNMB-210ENST00000478451 CDC14CA4D256 554 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 SPATA31C2B4DYI2 1134 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 LZTS3O60299 673 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-210ENST00000478451 FURINP09958 794 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 SCNN1DP51172 638 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 GDF10P55107 478 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 CENPCQ03188 943 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 POU4F2Q12837 409 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 DEPDC4Q8N2C3 294 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 FHDC1Q9C0D6 1143 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-210ENST00000478451 NOD1Q9Y239 953 aa7.41□□□□□ -1.22
GPNMB-210ENST00000478451 WASLO00401 505 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-210ENST00000478451 TLR1Q15399 786 aa7.4□□□□□ -1.22
GPNMB-210ENST00000478451 NBPF10Q6P3W6 841 aaKnown RBP7.4□□□□□ -1.22
GPNMB-210ENST00000478451 TBC1D9Q6ZT07 1266 aa7.4□□□□□ -1.22
GPNMB-210ENST00000478451 NBPF15Q8N660 670 aa7.4□□□□□ -1.22
GPNMB-210ENST00000478451 ZSCAN10Q96SZ4 725 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-210ENST00000478451 USP17L3A6NCW0 530 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 USP17L4A6NCW7 530 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 ATP9BO43861 1147 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 INHAP05111 366 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 GTF2IP78347 998 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 TAS1R3Q7RTX0 852 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 USP17L1Q7RTZ2 530 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 PLEKHM2Q8IWE5 1019 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 PCDHGA11Q9Y5H2 935 aa7.39□□□□□ -1.23
GPNMB-210ENST00000478451 GTF2E1P29083 439 aaPredicted RBP7.38□□□□□ -1.23
GPNMB-210ENST00000478451 LRRC4BQ9NT99 713 aa7.38□□□□□ -1.23
GPNMB-210ENST00000478451 DYRK1BQ9Y463 629 aa7.38□□□□□ -1.23
GPNMB-210ENST00000478451 TMEM229AB2RXF0 380 aa7.37□□□□□ -1.23
GPNMB-210ENST00000478451 PSME1Q06323 249 aa7.37□□□□□ -1.23
GPNMB-210ENST00000478451 WDR44Q5JSH3 913 aa7.37□□□□□ -1.23
GPNMB-210ENST00000478451 GNASQ5JWF2 1037 aa7.37□□□□□ -1.23
GPNMB-210ENST00000478451 TMEM214Q6NUQ4 689 aaKnown RBP7.37□□□□□ -1.23
GPNMB-210ENST00000478451 CALR3Q96L12 384 aaKnown RBP7.37□□□□□ -1.23
GPNMB-210ENST00000478451 TIMMDC1Q9NPL8 285 aa7.37□□□□□ -1.23
GPNMB-210ENST00000478451 CUEDC1Q9NWM3 386 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-210ENST00000478451 TRIM50Q86XT4 487 aa7.36□□□□□ -1.23
GPNMB-210ENST00000478451 SERTAD1Q9UHV2 236 aa7.36□□□□□ -1.23
GPNMB-210ENST00000478451 KRBA1A5PL33 1030 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 BCRP11274 1271 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 PHKA2P46019 1235 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 C4orf17Q53FE4 359 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 RIPOR1Q6ZS17 1223 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 C14orf37Q86TY3 774 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 PPARGC1BQ86YN6 1023 aaKnown RBP7.35□□□□□ -1.23
GPNMB-210ENST00000478451 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 NEDD1Q8NHV4 660 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 RHBDD1Q8TEB9 315 aa7.35□□□□□ -1.23
GPNMB-210ENST00000478451 GAS2L1Q99501 681 aaPredicted RBP7.35□□□□□ -1.23
GPNMB-210ENST00000478451 ATP1A2P50993 1020 aa7.34□□□□□ -1.23
GPNMB-210ENST00000478451 SMTNP53814 917 aa7.34□□□□□ -1.23
GPNMB-210ENST00000478451 GAS6Q14393 721 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms