RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 GNASQ5JWF2 1037 aa10.46□□□□□ -0.73
SYCP3-205ENST00000478238 TMEM214Q6NUQ4 689 aaKnown RBP10.46□□□□□ -0.73
SYCP3-205ENST00000478238 PLPP7Q8NBV4 271 aa10.46□□□□□ -0.73
SYCP3-205ENST00000478238 TRERF1Q96PN7 1200 aa10.46□□□□□ -0.73
SYCP3-205ENST00000478238 GPAMQ9HCL2 828 aa10.46□□□□□ -0.73
SYCP3-205ENST00000478238 IGF1RP08069 1367 aa10.45□□□□□ -0.74
SYCP3-205ENST00000478238 RNF225M0QZC1 329 aaPredicted RBP10.45□□□□□ -0.74
SYCP3-205ENST00000478238 CELA2BP08218 269 aaPredicted RBP10.45□□□□□ -0.74
SYCP3-205ENST00000478238 MAP7D1Q3KQU3 841 aa10.45□□□□□ -0.74
SYCP3-205ENST00000478238 C4orf17Q53FE4 359 aa10.45□□□□□ -0.74
SYCP3-205ENST00000478238 A0A1B0GTH6 734 aa10.44□□□□□ -0.74
SYCP3-205ENST00000478238 THBS1P07996 1170 aa10.43□□□□□ -0.74
SYCP3-205ENST00000478238 SCNN1DP51172 638 aa10.43□□□□□ -0.74
SYCP3-205ENST00000478238 MAP3K10Q02779 954 aa10.43□□□□□ -0.74
SYCP3-205ENST00000478238 TLR1Q15399 786 aa10.43□□□□□ -0.74
SYCP3-205ENST00000478238 GDF10P55107 478 aa10.42□□□□□ -0.74
SYCP3-205ENST00000478238 RASSF7Q02833 373 aa10.42□□□□□ -0.74
SYCP3-205ENST00000478238 PPARGC1BQ86YN6 1023 aaKnown RBP10.42□□□□□ -0.74
SYCP3-205ENST00000478238 RHBDD1Q8TEB9 315 aa10.42□□□□□ -0.74
SYCP3-205ENST00000478238 MX2P20592 715 aa10.41□□□□□ -0.74
SYCP3-205ENST00000478238 MARSP56192 900 aaKnown RBP10.41□□□□□ -0.74
SYCP3-205ENST00000478238 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
SYCP3-205ENST00000478238 INHAP05111 366 aa10.4□□□□□ -0.74
SYCP3-205ENST00000478238 TMEM151AQ8N4L1 468 aa10.4□□□□□ -0.74
SYCP3-205ENST00000478238 GDF11O95390 407 aa10.39□□□□□ -0.75
SYCP3-205ENST00000478238 MSX1P28360 303 aa10.39□□□□□ -0.75
SYCP3-205ENST00000478238 ACDQ96AP0 544 aa10.39□□□□□ -0.75
SYCP3-205ENST00000478238 POM121Q96HA1 1249 aa10.39□□□□□ -0.75
SYCP3-205ENST00000478238 RUBCNLQ9H714 662 aa10.39□□□□□ -0.75
SYCP3-205ENST00000478238 CSB-PGBD3P0DP91 1061 aa10.38□□□□□ -0.75
SYCP3-205ENST00000478238 PGBD3Q8N328 593 aa10.38□□□□□ -0.75
SYCP3-205ENST00000478238 CFHR5Q9BXR6 569 aa10.38□□□□□ -0.75
SYCP3-205ENST00000478238 ENAMQ9NRM1 1142 aa10.38□□□□□ -0.75
SYCP3-205ENST00000478238 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
SYCP3-205ENST00000478238 BCRP11274 1271 aa10.37□□□□□ -0.75
SYCP3-205ENST00000478238 IRS1P35568 1242 aa10.37□□□□□ -0.75
SYCP3-205ENST00000478238 UBAP2LQ14157 1087 aaKnown RBP10.37□□□□□ -0.75
SYCP3-205ENST00000478238 LBRQ14739 615 aaKnown RBP10.37□□□□□ -0.75
SYCP3-205ENST00000478238 KCTD17Q8N5Z5 321 aa10.37□□□□□ -0.75
SYCP3-205ENST00000478238 SCARF2Q96GP6 870 aaPredicted RBP10.37□□□□□ -0.75
SYCP3-205ENST00000478238 ALG2Q9H553 416 aa10.37□□□□□ -0.75
SYCP3-205ENST00000478238 PLA2G4AP47712 749 aa10.36□□□□□ -0.75
SYCP3-205ENST00000478238 SMTNP53814 917 aa10.36□□□□□ -0.75
SYCP3-205ENST00000478238 WWC1Q8IX03 1113 aa10.36□□□□□ -0.75
SYCP3-205ENST00000478238 PHF24Q9UPV7 400 aa10.36□□□□□ -0.75
SYCP3-205ENST00000478238 TMEM229AB2RXF0 380 aa10.35□□□□□ -0.75
SYCP3-205ENST00000478238 SKIP12755 728 aa10.35□□□□□ -0.75
SYCP3-205ENST00000478238 EFHC2Q5JST6 749 aa10.35□□□□□ -0.75
SYCP3-205ENST00000478238 SERTAD1Q9UHV2 236 aa10.35□□□□□ -0.75
SYCP3-205ENST00000478238 RAD21O60216 631 aa10.34□□□□□ -0.75
SYCP3-205ENST00000478238 EML3Q32P44 896 aa10.34□□□□□ -0.75
SYCP3-205ENST00000478238 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
SYCP3-205ENST00000478238 CRISPLD1Q9H336 500 aa10.34□□□□□ -0.75
SYCP3-205ENST00000478238 PCDHGA11Q9Y5H2 935 aa10.34□□□□□ -0.75
SYCP3-205ENST00000478238 MAP2K3P46734 347 aa10.33□□□□□ -0.76
SYCP3-205ENST00000478238 FLIIQ13045 1269 aa10.33□□□□□ -0.76
SYCP3-205ENST00000478238 KANK3Q6NY19 840 aa10.33□□□□□ -0.76
SYCP3-205ENST00000478238 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
SYCP3-205ENST00000478238 UBTFP17480 764 aaKnown RBP10.32□□□□□ -0.76
SYCP3-205ENST00000478238 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
SYCP3-205ENST00000478238 NEDD1Q8NHV4 660 aa10.32□□□□□ -0.76
SYCP3-205ENST00000478238 SLC4A9Q96Q91 983 aa10.32□□□□□ -0.76
SYCP3-205ENST00000478238 OXCT2Q9BYC2 517 aaPredicted RBP10.32□□□□□ -0.76
SYCP3-205ENST00000478238 LRRC4BQ9NT99 713 aa10.32□□□□□ -0.76
SYCP3-205ENST00000478238 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
SYCP3-205ENST00000478238 MTFR1Q15390 333 aa10.31□□□□□ -0.76
SYCP3-205ENST00000478238 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
SYCP3-205ENST00000478238 ATXN7L1Q9ULK2 861 aaPredicted RBP10.31□□□□□ -0.76
SYCP3-205ENST00000478238 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
SYCP3-205ENST00000478238 A6NJY4 79 aa10.3□□□□□ -0.76
SYCP3-205ENST00000478238 OIP5O43482 229 aa10.3□□□□□ -0.76
SYCP3-205ENST00000478238 ATP4AP20648 1035 aa10.3□□□□□ -0.76
SYCP3-205ENST00000478238 NCOA4Q13772 614 aa10.3□□□□□ -0.76
SYCP3-205ENST00000478238 ZNF295-AS1Q8N0V1 137 aa10.3□□□□□ -0.76
SYCP3-205ENST00000478238 KLRG1Q96E93 195 aa10.3□□□□□ -0.76
SYCP3-205ENST00000478238 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
SYCP3-205ENST00000478238 IQSEC3Q9UPP2 1182 aaPredicted RBP10.3□□□□□ -0.76
SYCP3-205ENST00000478238 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 CDK2AP1O14519 115 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 BNIP3LO60238 219 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 GTF2IP78347 998 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 C1orf216Q8TAB5 229 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 AIDAQ96BJ3 306 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 USP3Q9Y6I4 520 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 DNMT3AQ9Y6K1 912 aaPredicted RBP10.29□□□□□ -0.76
SYCP3-205ENST00000478238 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
SYCP3-205ENST00000478238 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
SYCP3-205ENST00000478238 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
SYCP3-205ENST00000478238 DNAAF2Q9NVR5 837 aaKnown RBP10.28□□□□□ -0.76
SYCP3-205ENST00000478238 PHF20L1A8MW92 1017 aa10.27□□□□□ -0.77
SYCP3-205ENST00000478238 FGFR3P22607 806 aa10.27□□□□□ -0.77
SYCP3-205ENST00000478238 PSME1Q06323 249 aa10.27□□□□□ -0.77
SYCP3-205ENST00000478238 FIGNL1Q6PIW4 674 aa10.27□□□□□ -0.77
SYCP3-205ENST00000478238 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.77
SYCP3-205ENST00000478238 C2CD2LO14523 706 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 BACH1O14867 736 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 BMP4P12644 408 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 CTBSQ01459 385 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
SYCP3-205ENST00000478238 PODNQ7Z5L7 613 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms