RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
LCLAT1-209ENST00000478015 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
LCLAT1-209ENST00000478015 SYT17Q9BSW7 474 aa13.86□□□□□ -0.19
LCLAT1-209ENST00000478015 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
LCLAT1-209ENST00000478015 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
LCLAT1-209ENST00000478015 MSL1Q68DK7 614 aa13.85□□□□□ -0.19
LCLAT1-209ENST00000478015 SMARCC1Q92922 1105 aaPredicted RBP13.84□□□□□ -0.19
LCLAT1-209ENST00000478015 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
LCLAT1-209ENST00000478015 ATP6V1AP38606 617 aa13.83□□□□□ -0.2
LCLAT1-209ENST00000478015 ARXQ96QS3 562 aa13.83□□□□□ -0.2
LCLAT1-209ENST00000478015 U2SURPO15042 1029 aaKnown RBP13.82□□□□□ -0.2
LCLAT1-209ENST00000478015 PHF14O94880 888 aa13.82□□□□□ -0.2
LCLAT1-209ENST00000478015 CABP4P57796 275 aa13.82□□□□□ -0.2
LCLAT1-209ENST00000478015 COL5A3P25940 1745 aaPredicted RBP13.82□□□□□ -0.2
LCLAT1-209ENST00000478015 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
LCLAT1-209ENST00000478015 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
LCLAT1-209ENST00000478015 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
LCLAT1-209ENST00000478015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.81□□□□□ -0.2
LCLAT1-209ENST00000478015 MSH5O43196 834 aa13.81□□□□□ -0.2
LCLAT1-209ENST00000478015 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
LCLAT1-209ENST00000478015 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
LCLAT1-209ENST00000478015 SLC16A10Q8TF71 515 aa13.81□□□□□ -0.2
LCLAT1-209ENST00000478015 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
LCLAT1-209ENST00000478015 RNMTO43148 476 aaKnown RBP13.8□□□□□ -0.2
LCLAT1-209ENST00000478015 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
LCLAT1-209ENST00000478015 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
LCLAT1-209ENST00000478015 NLGN2Q8NFZ4 835 aa13.8□□□□□ -0.2
LCLAT1-209ENST00000478015 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
LCLAT1-209ENST00000478015 TJP1Q07157 1748 aa13.79□□□□□ -0.2
LCLAT1-209ENST00000478015 GNPATO15228 680 aa13.79□□□□□ -0.2
LCLAT1-209ENST00000478015 AK7Q96M32 723 aa13.79□□□□□ -0.2
LCLAT1-209ENST00000478015 SLC52A2Q9HAB3 445 aa13.79□□□□□ -0.2
LCLAT1-209ENST00000478015 MRC1P22897 1456 aa13.79□□□□□ -0.2
LCLAT1-209ENST00000478015 ZNF831Q5JPB2 1677 aa13.79□□□□□ -0.2
LCLAT1-209ENST00000478015 PRKAR2BP31323 418 aa13.78□□□□□ -0.2
LCLAT1-209ENST00000478015 DDX10Q13206 875 aaKnown RBP13.78□□□□□ -0.2
LCLAT1-209ENST00000478015 KCPQ6ZWJ8 1503 aa13.76□□□□□ -0.21
LCLAT1-209ENST00000478015 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
LCLAT1-209ENST00000478015 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
LCLAT1-209ENST00000478015 SIPA1L3O60292 1781 aaPredicted RBP13.75□□□□□ -0.21
LCLAT1-209ENST00000478015 C4AP0C0L4 1744 aa13.75□□□□□ -0.21
LCLAT1-209ENST00000478015 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
LCLAT1-209ENST00000478015 SSFA2P28290 1259 aa13.75□□□□□ -0.21
LCLAT1-209ENST00000478015 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
LCLAT1-209ENST00000478015 INTS5Q6P9B9 1019 aaKnown RBP13.75□□□□□ -0.21
LCLAT1-209ENST00000478015 ARHGEF1Q92888 912 aaKnown RBP13.75□□□□□ -0.21
LCLAT1-209ENST00000478015 POLD1P28340 1107 aa13.74□□□□□ -0.21
LCLAT1-209ENST00000478015 CRKLP46109 303 aaKnown RBP13.74□□□□□ -0.21
LCLAT1-209ENST00000478015 DNAJC10Q8IXB1 793 aa13.74□□□□□ -0.21
LCLAT1-209ENST00000478015 UBR2Q8IWV8 1755 aa13.74□□□□□ -0.21
LCLAT1-209ENST00000478015 KCNQ3O43525 872 aa13.74□□□□□ -0.21
LCLAT1-209ENST00000478015 CICQ96RK0 1608 aaPredicted RBP13.73□□□□□ -0.21
LCLAT1-209ENST00000478015 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
LCLAT1-209ENST00000478015 CNTNAP4Q9C0A0 1308 aa13.73□□□□□ -0.21
LCLAT1-209ENST00000478015 CEMIPQ8WUJ3 1361 aa13.73□□□□□ -0.21
LCLAT1-209ENST00000478015 GNAT3A8MTJ3 354 aa13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 SRP68Q9UHB9 627 aaKnown RBP13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 RPS6KA4O75676 772 aa13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 MCM10Q7L590 875 aa13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
LCLAT1-209ENST00000478015 CYP19A1P11511 503 aaPredicted RBP13.71□□□□□ -0.21
LCLAT1-209ENST00000478015 GYS1P13807 737 aa13.71□□□□□ -0.21
LCLAT1-209ENST00000478015 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
LCLAT1-209ENST00000478015 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.21
LCLAT1-209ENST00000478015 PLEKHF1Q96S99 279 aa13.71□□□□□ -0.21
LCLAT1-209ENST00000478015 WWC3Q9ULE0 1092 aa13.71□□□□□ -0.21
LCLAT1-209ENST00000478015 DLG5Q8TDM6 1919 aa13.71□□□□□ -0.22
LCLAT1-209ENST00000478015 FCHSD2O94868 740 aa13.7□□□□□ -0.22
LCLAT1-209ENST00000478015 MMP10P09238 476 aa13.7□□□□□ -0.22
LCLAT1-209ENST00000478015 GAS2L2Q8NHY3 880 aa13.7□□□□□ -0.22
LCLAT1-209ENST00000478015 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
LCLAT1-209ENST00000478015 ZBTB1Q9Y2K1 713 aa13.69□□□□□ -0.22
LCLAT1-209ENST00000478015 YY1P25490 414 aa13.68□□□□□ -0.22
LCLAT1-209ENST00000478015 FKBP8Q14318 412 aa13.68□□□□□ -0.22
LCLAT1-209ENST00000478015 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
LCLAT1-209ENST00000478015 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
LCLAT1-209ENST00000478015 KIAA1551Q9HCM1 1747 aa13.68□□□□□ -0.22
LCLAT1-209ENST00000478015 CHD4Q14839 1912 aa13.67□□□□□ -0.22
LCLAT1-209ENST00000478015 THUMPD2Q9BTF0 503 aaKnown RBP13.67□□□□□ -0.22
LCLAT1-209ENST00000478015 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
LCLAT1-209ENST00000478015 MIS18AQ9NYP9 233 aa13.67□□□□□ -0.22
LCLAT1-209ENST00000478015 SOS1Q07889 1333 aaPredicted RBP13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 USP42Q9H9J4 1324 aaKnown RBP13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 RFC4P35249 363 aa13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 DDR1Q08345 913 aa13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 TEFQ10587 303 aa13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 CD2APQ9Y5K6 639 aa13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
LCLAT1-209ENST00000478015 ADRA2BP18089 450 aa13.65□□□□□ -0.22
LCLAT1-209ENST00000478015 GPR162Q16538 588 aa13.65□□□□□ -0.22
LCLAT1-209ENST00000478015 KIF13BQ9NQT8 1826 aa13.65□□□□□ -0.22
LCLAT1-209ENST00000478015 CEP350Q5VT06 3117 aa13.65□□□□□ -0.22
LCLAT1-209ENST00000478015 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
LCLAT1-209ENST00000478015 HEG1Q9ULI3 1381 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms