RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 NCOA4Q13772 614 aa9.91□□□□□ -0.82
VPS50-213ENST00000477572 C4orf17Q53FE4 359 aa9.91□□□□□ -0.82
VPS50-213ENST00000477572 GNASQ5JWF2 1037 aa9.91□□□□□ -0.82
VPS50-213ENST00000477572 TRIM22Q8IYM9 498 aa9.91□□□□□ -0.82
VPS50-213ENST00000477572 GTPBP3Q969Y2 492 aaKnown RBP9.91□□□□□ -0.82
VPS50-213ENST00000477572 EML3Q32P44 896 aa9.9□□□□□ -0.82
VPS50-213ENST00000477572 USP17L5A8MUK1 530 aa9.89□□□□□ -0.83
VPS50-213ENST00000477572 INHAP05111 366 aa9.89□□□□□ -0.83
VPS50-213ENST00000477572 PSME1Q06323 249 aa9.89□□□□□ -0.83
VPS50-213ENST00000477572 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
VPS50-213ENST00000477572 PROSER2Q86WR7 435 aaPredicted RBP9.89□□□□□ -0.83
VPS50-213ENST00000477572 PCDHGA11Q9Y5H2 935 aa9.89□□□□□ -0.83
VPS50-213ENST00000477572 FAM181BA6NEQ2 426 aa9.88□□□□□ -0.83
VPS50-213ENST00000477572 F11P03951 625 aa9.88□□□□□ -0.83
VPS50-213ENST00000477572 GTF2IP78347 998 aa9.88□□□□□ -0.83
VPS50-213ENST00000477572 GAS6Q14393 721 aa9.88□□□□□ -0.83
VPS50-213ENST00000477572 WDR44Q5JSH3 913 aa9.88□□□□□ -0.83
VPS50-213ENST00000477572 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
VPS50-213ENST00000477572 NOD1Q9Y239 953 aa9.88□□□□□ -0.83
VPS50-213ENST00000477572 TMEM229AB2RXF0 380 aa9.87□□□□□ -0.83
VPS50-213ENST00000477572 WHAMMQ8TF30 809 aa9.87□□□□□ -0.83
VPS50-213ENST00000477572 PLA2G4AP47712 749 aa9.86□□□□□ -0.83
VPS50-213ENST00000477572 PPARGC1BQ86YN6 1023 aaKnown RBP9.86□□□□□ -0.83
VPS50-213ENST00000477572 FNBP4Q8N3X1 1017 aaPredicted RBP9.86□□□□□ -0.83
VPS50-213ENST00000477572 NFATC2IPQ8NCF5 419 aa9.86□□□□□ -0.83
VPS50-213ENST00000477572 RUBCNLQ9H714 662 aa9.86□□□□□ -0.83
VPS50-213ENST00000477572 H7C1W4 665 aa9.85□□□□□ -0.83
VPS50-213ENST00000477572 SMTNP53814 917 aa9.85□□□□□ -0.83
VPS50-213ENST00000477572 RHBDD1Q8TEB9 315 aa9.85□□□□□ -0.83
VPS50-213ENST00000477572 NUCKS1Q9H1E3 243 aaKnown RBP9.85□□□□□ -0.83
VPS50-213ENST00000477572 USP3Q9Y6I4 520 aa9.85□□□□□ -0.83
VPS50-213ENST00000477572 A0A1B0GTH6 734 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 USP17L3A6NCW0 530 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 USP17L4A6NCW7 530 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 ADAMTS2O95450 1211 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 MSX1P28360 303 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 FOXR1Q6PIV2 292 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 USP17L2Q6R6M4 530 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 USP17L1Q7RTZ2 530 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
VPS50-213ENST00000477572 GLMNQ92990 594 aa9.84□□□□□ -0.83
VPS50-213ENST00000477572 THBS1P07996 1170 aa9.83□□□□□ -0.84
VPS50-213ENST00000477572 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
VPS50-213ENST00000477572 ZNF385CQ66K41 422 aaPredicted RBP9.82□□□□□ -0.84
VPS50-213ENST00000477572 SVOPQ8N4V2 548 aa9.82□□□□□ -0.84
VPS50-213ENST00000477572 GMCL1Q96IK5 515 aa9.82□□□□□ -0.84
VPS50-213ENST00000477572 A6NJY4 79 aa9.81□□□□□ -0.84
VPS50-213ENST00000477572 ATP9BO43861 1147 aa9.81□□□□□ -0.84
VPS50-213ENST00000477572 LZTS3O60299 673 aaPredicted RBP9.81□□□□□ -0.84
VPS50-213ENST00000477572 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
VPS50-213ENST00000477572 NIFKQ9BYG3 293 aaKnown RBP9.81□□□□□ -0.84
VPS50-213ENST00000477572 ZNF358Q9NW07 568 aa9.81□□□□□ -0.84
VPS50-213ENST00000477572 KIAA1024Q9UPX6 916 aa9.81□□□□□ -0.84
VPS50-213ENST00000477572 PARP3Q9Y6F1 533 aa9.81□□□□□ -0.84
VPS50-213ENST00000477572 SLURP2P0DP57 97 aa9.8□□□□□ -0.84
VPS50-213ENST00000477572 CSB-PGBD3P0DP91 1061 aa9.8□□□□□ -0.84
VPS50-213ENST00000477572 TBCELQ5QJ74 424 aa9.8□□□□□ -0.84
VPS50-213ENST00000477572 PGBD3Q8N328 593 aa9.8□□□□□ -0.84
VPS50-213ENST00000477572 TPCN2Q8NHX9 752 aa9.8□□□□□ -0.84
VPS50-213ENST00000477572 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
VPS50-213ENST00000477572 TFIP11Q9UBB9 837 aaKnown RBP9.8□□□□□ -0.84
VPS50-213ENST00000477572 CLDN10P78369 228 aa9.79□□□□□ -0.84
VPS50-213ENST00000477572 SRSF11Q05519 484 aaKnown RBP9.79□□□□□ -0.84
VPS50-213ENST00000477572 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
VPS50-213ENST00000477572 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
VPS50-213ENST00000477572 CABP1Q9NZU7 370 aa9.79□□□□□ -0.84
VPS50-213ENST00000477572 MKRN1Q9UHC7 482 aaKnown RBP9.79□□□□□ -0.84
VPS50-213ENST00000477572 IGF1RP08069 1367 aa9.78□□□□□ -0.84
VPS50-213ENST00000477572 A6NJR5 290 aa9.78□□□□□ -0.84
VPS50-213ENST00000477572 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
VPS50-213ENST00000477572 TRIM50Q86XT4 487 aa9.78□□□□□ -0.84
VPS50-213ENST00000477572 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
VPS50-213ENST00000477572 TNS4Q8IZW8 715 aa9.78□□□□□ -0.84
VPS50-213ENST00000477572 MBIPQ9NS73 344 aa9.78□□□□□ -0.84
VPS50-213ENST00000477572 IQSEC3Q9UPP2 1182 aaPredicted RBP9.78□□□□□ -0.84
VPS50-213ENST00000477572 CDK2AP1O14519 115 aa9.77□□□□□ -0.85
VPS50-213ENST00000477572 MTFR1Q15390 333 aa9.77□□□□□ -0.85
VPS50-213ENST00000477572 CCDC102BQ68D86 513 aa9.77□□□□□ -0.85
VPS50-213ENST00000477572 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
VPS50-213ENST00000477572 OGFOD1Q8N543 542 aa9.77□□□□□ -0.85
VPS50-213ENST00000477572 ZNF594Q96JF6 807 aaPredicted RBP9.77□□□□□ -0.85
VPS50-213ENST00000477572 DNAAF2Q9NVR5 837 aaKnown RBP9.77□□□□□ -0.85
VPS50-213ENST00000477572 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.85
VPS50-213ENST00000477572 BACH1O14867 736 aa9.76□□□□□ -0.85
VPS50-213ENST00000477572 MX2P20592 715 aa9.76□□□□□ -0.85
VPS50-213ENST00000477572 ATP4AP20648 1035 aa9.76□□□□□ -0.85
VPS50-213ENST00000477572 EFHC2Q5JST6 749 aa9.76□□□□□ -0.85
VPS50-213ENST00000477572 ZNF777Q9ULD5 760 aaPredicted RBP9.76□□□□□ -0.85
VPS50-213ENST00000477572 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
VPS50-213ENST00000477572 UBAP2LQ14157 1087 aaKnown RBP9.75□□□□□ -0.85
VPS50-213ENST00000477572 ARSJQ5FYB0 599 aaPredicted RBP9.75□□□□□ -0.85
VPS50-213ENST00000477572 ABHD17AQ96GS6 310 aa9.75□□□□□ -0.85
VPS50-213ENST00000477572 MAFBQ9Y5Q3 323 aaPredicted RBP9.75□□□□□ -0.85
VPS50-213ENST00000477572 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
VPS50-213ENST00000477572 ATP1A2P50993 1020 aa9.74□□□□□ -0.85
VPS50-213ENST00000477572 SLC9A9Q8IVB4 645 aa9.74□□□□□ -0.85
VPS50-213ENST00000477572 SCHIP1Q9P0W5 487 aaPredicted RBP9.74□□□□□ -0.85
VPS50-213ENST00000477572 SFI1A8K8P3 1242 aa9.73□□□□□ -0.85
VPS50-213ENST00000477572 NBPF1Q3BBV0 1214 aa9.73□□□□□ -0.85
VPS50-213ENST00000477572 ZDHHC1Q8WTX9 485 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms