RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 SKIP12755 728 aa8.39□□□□□ -1.07
VPS45-207ENST00000477558 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
VPS45-207ENST00000477558 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
VPS45-207ENST00000477558 TTBK1Q5TCY1 1321 aaPredicted RBP8.39□□□□□ -1.07
VPS45-207ENST00000477558 MAGI3Q5TCQ9 1506 aa8.39□□□□□ -1.07
VPS45-207ENST00000477558 PALM3A6NDB9 673 aaPredicted RBP8.38□□□□□ -1.07
VPS45-207ENST00000477558 AXIN1O15169 862 aa8.38□□□□□ -1.07
VPS45-207ENST00000477558 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
VPS45-207ENST00000477558 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
VPS45-207ENST00000477558 CCDC116Q8IYX3 515 aa8.38□□□□□ -1.07
VPS45-207ENST00000477558 ARID3AQ99856 593 aa8.38□□□□□ -1.07
VPS45-207ENST00000477558 DACH1Q9UI36 760 aa8.38□□□□□ -1.07
VPS45-207ENST00000477558 CHIC2Q9UKJ5 165 aa8.38□□□□□ -1.07
VPS45-207ENST00000477558 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
VPS45-207ENST00000477558 PLPP7Q8NBV4 271 aa8.37□□□□□ -1.07
VPS45-207ENST00000477558 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
VPS45-207ENST00000477558 TTC37Q6PGP7 1564 aa8.37□□□□□ -1.07
VPS45-207ENST00000477558 C11orf95C9JLR9 678 aaPredicted RBP8.37□□□□□ -1.07
VPS45-207ENST00000477558 ATP9BO43861 1147 aa8.37□□□□□ -1.07
VPS45-207ENST00000477558 WFS1O76024 890 aa8.37□□□□□ -1.07
VPS45-207ENST00000477558 DEPDC4Q8N2C3 294 aa8.37□□□□□ -1.07
VPS45-207ENST00000477558 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
VPS45-207ENST00000477558 KLF16Q9BXK1 252 aaPredicted RBP8.37□□□□□ -1.07
VPS45-207ENST00000477558 GMPR2Q9P2T1 348 aaKnown RBP8.37□□□□□ -1.07
VPS45-207ENST00000477558 SERPINA10Q9UK55 444 aa8.37□□□□□ -1.07
VPS45-207ENST00000477558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS45-207ENST00000477558 TSPOAP1O95153 1857 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 VPS8Q8N3P4 1428 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 RFX1P22670 979 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 RANGAP1P46060 587 aaPredicted RBP8.36□□□□□ -1.07
VPS45-207ENST00000477558 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
VPS45-207ENST00000477558 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 NFATC2IPQ8NCF5 419 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 DOLKQ9UPQ8 538 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 ARAP3Q8WWN8 1544 aa8.36□□□□□ -1.07
VPS45-207ENST00000477558 KIF14Q15058 1648 aa8.35□□□□□ -1.07
VPS45-207ENST00000477558 TROQ12816 1431 aaPredicted RBP8.35□□□□□ -1.07
VPS45-207ENST00000477558 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
VPS45-207ENST00000477558 SCTRP47872 440 aa8.35□□□□□ -1.07
VPS45-207ENST00000477558 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
VPS45-207ENST00000477558 FAM69CQ0P6D2 419 aa8.35□□□□□ -1.07
VPS45-207ENST00000477558 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
VPS45-207ENST00000477558 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
VPS45-207ENST00000477558 ITPKCQ96DU7 683 aa8.35□□□□□ -1.07
VPS45-207ENST00000477558 MAP3K1Q13233 1512 aa8.34□□□□□ -1.07
VPS45-207ENST00000477558 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
VPS45-207ENST00000477558 ZIC2O95409 532 aaPredicted RBP8.34□□□□□ -1.07
VPS45-207ENST00000477558 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
VPS45-207ENST00000477558 WDR4P57081 412 aaKnown RBP8.34□□□□□ -1.07
VPS45-207ENST00000477558 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
VPS45-207ENST00000477558 CYLDQ9NQC7 956 aa8.34□□□□□ -1.07
VPS45-207ENST00000477558 MAFBQ9Y5Q3 323 aaPredicted RBP8.34□□□□□ -1.07
VPS45-207ENST00000477558 TEX14Q8IWB6 1497 aa8.34□□□□□ -1.07
VPS45-207ENST00000477558 LILRA1O75019 489 aa8.33□□□□□ -1.08
VPS45-207ENST00000477558 TIMP2P16035 220 aa8.33□□□□□ -1.08
VPS45-207ENST00000477558 NCOA4Q13772 614 aa8.33□□□□□ -1.08
VPS45-207ENST00000477558 MAP7D1Q3KQU3 841 aa8.33□□□□□ -1.08
VPS45-207ENST00000477558 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
VPS45-207ENST00000477558 TIAM1Q13009 1591 aa8.33□□□□□ -1.08
VPS45-207ENST00000477558 MYO5CQ9NQX4 1742 aa8.33□□□□□ -1.08
VPS45-207ENST00000477558 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 NFX1Q12986 1120 aaKnown RBP8.32□□□□□ -1.08
VPS45-207ENST00000477558 CBLBQ13191 982 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 USP17L2Q6R6M4 530 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 KDM6BO15054 1643 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 PREX2Q70Z35 1606 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 EHBP1L1Q8N3D4 1523 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 CD109Q6YHK3 1445 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 CFAP74Q9C0B2 1584 aa8.32□□□□□ -1.08
VPS45-207ENST00000477558 NEO1Q92859 1461 aa8.31□□□□□ -1.08
VPS45-207ENST00000477558 ERVK-9P63128 1117 aa8.31□□□□□ -1.08
VPS45-207ENST00000477558 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
VPS45-207ENST00000477558 STK17AQ9UEE5 414 aa8.31□□□□□ -1.08
VPS45-207ENST00000477558 FRMPD1Q5SYB0 1578 aa8.31□□□□□ -1.08
VPS45-207ENST00000477558 COL17A1Q9UMD9 1497 aaPredicted RBP8.31□□□□□ -1.08
VPS45-207ENST00000477558 CDC42BPAQ5VT25 1732 aa8.31□□□□□ -1.08
VPS45-207ENST00000477558 WIPF1O43516 503 aa8.3□□□□□ -1.08
VPS45-207ENST00000477558 PLEKHM2Q8IWE5 1019 aa8.3□□□□□ -1.08
VPS45-207ENST00000477558 CDC42BPBQ9Y5S2 1711 aa8.3□□□□□ -1.08
VPS45-207ENST00000477558 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
VPS45-207ENST00000477558 USP4Q13107 963 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 EML3Q32P44 896 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
VPS45-207ENST00000477558 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 MKRN1Q9UHC7 482 aaKnown RBP8.29□□□□□ -1.08
VPS45-207ENST00000477558 PHLDB1Q86UU1 1377 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 RICTORQ6R327 1708 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 PLCH2O75038 1416 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.29□□□□□ -1.08
VPS45-207ENST00000477558 PLEKHD1A6NEE1 506 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
VPS45-207ENST00000477558 INSM1Q01101 510 aaPredicted RBP8.29□□□□□ -1.08
VPS45-207ENST00000477558 OSBPL3Q9H4L5 887 aa8.29□□□□□ -1.08
VPS45-207ENST00000477558 LZTS3O60299 673 aaPredicted RBP8.28□□□□□ -1.08
VPS45-207ENST00000477558 AGBL1Q96MI9 1066 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms