RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 PHF14O94880 888 aa21.24■□□□□ 0.99
CLDN11-204ENST00000477531 MSL1Q68DK7 614 aa21.24■□□□□ 0.99
CLDN11-204ENST00000477531 RBM42Q9BTD8 480 aaKnown RBP21.24■□□□□ 0.99
CLDN11-204ENST00000477531 TAF1LQ8IZX4 1826 aa21.23■□□□□ 0.99
CLDN11-204ENST00000477531 SSFA2P28290 1259 aa21.23■□□□□ 0.99
CLDN11-204ENST00000477531 LINC00116Q8NCU8 138 aa21.23■□□□□ 0.99
CLDN11-204ENST00000477531 C4BP0C0L5 1744 aa21.23■□□□□ 0.99
CLDN11-204ENST00000477531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.22■□□□□ 0.99
CLDN11-204ENST00000477531 GNPATO15228 680 aa21.21■□□□□ 0.99
CLDN11-204ENST00000477531 HMOX1P09601 288 aa21.21■□□□□ 0.99
CLDN11-204ENST00000477531 ITPK1Q13572 414 aa21.21■□□□□ 0.99
CLDN11-204ENST00000477531 GPR162Q16538 588 aa21.21■□□□□ 0.99
CLDN11-204ENST00000477531 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
CLDN11-204ENST00000477531 KDM6AO15550 1401 aaPredicted RBP21.2■□□□□ 0.98
CLDN11-204ENST00000477531 COL24A1Q17RW2 1714 aa21.19■□□□□ 0.98
CLDN11-204ENST00000477531 NFATC2IPQ8NCF5 419 aa21.19■□□□□ 0.98
CLDN11-204ENST00000477531 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
CLDN11-204ENST00000477531 RTCBQ9Y3I0 505 aaKnown RBP21.17■□□□□ 0.98
CLDN11-204ENST00000477531 U2SURPO15042 1029 aaKnown RBP21.16■□□□□ 0.98
CLDN11-204ENST00000477531 RC3H1Q5TC82 1133 aaKnown RBP21.16■□□□□ 0.98
CLDN11-204ENST00000477531 AMIGO3Q86WK7 504 aa21.16■□□□□ 0.98
CLDN11-204ENST00000477531 CFAP53Q96M91 514 aa21.16■□□□□ 0.98
CLDN11-204ENST00000477531 PTCD1O75127 700 aaKnown RBP21.15■□□□□ 0.98
CLDN11-204ENST00000477531 TRAPPC3LQ5T215 181 aa21.15■□□□□ 0.98
CLDN11-204ENST00000477531 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
CLDN11-204ENST00000477531 UBR3Q6ZT12 1888 aa21.14■□□□□ 0.97
CLDN11-204ENST00000477531 NLGN2Q8NFZ4 835 aa21.14■□□□□ 0.97
CLDN11-204ENST00000477531 SLC4A9Q96Q91 983 aa21.14■□□□□ 0.97
CLDN11-204ENST00000477531 CD2APQ9Y5K6 639 aa21.14■□□□□ 0.97
CLDN11-204ENST00000477531 UTRNP46939 3433 aa21.14■□□□□ 0.97
CLDN11-204ENST00000477531 SLC52A2Q9HAB3 445 aa21.13■□□□□ 0.97
CLDN11-204ENST00000477531 RNMTO43148 476 aaKnown RBP21.12■□□□□ 0.97
CLDN11-204ENST00000477531 ADRA2BP18089 450 aa21.12■□□□□ 0.97
CLDN11-204ENST00000477531 MTHFSDQ2M296 383 aaKnown RBP21.12■□□□□ 0.97
CLDN11-204ENST00000477531 CNTNAP4Q9C0A0 1308 aa21.11■□□□□ 0.97
CLDN11-204ENST00000477531 LGR6Q9HBX8 967 aa21.11■□□□□ 0.97
CLDN11-204ENST00000477531 NUDCQ9Y266 331 aa21.11■□□□□ 0.97
CLDN11-204ENST00000477531 ZNF831Q5JPB2 1677 aa21.1■□□□□ 0.97
CLDN11-204ENST00000477531 GRIN3BO60391 1043 aa21.1■□□□□ 0.97
CLDN11-204ENST00000477531 RPS6KA4O75676 772 aa21.1■□□□□ 0.97
CLDN11-204ENST00000477531 RFC4P35249 363 aa21.1■□□□□ 0.97
CLDN11-204ENST00000477531 GAS2L2Q8NHY3 880 aa21.09■□□□□ 0.97
CLDN11-204ENST00000477531 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
CLDN11-204ENST00000477531 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
CLDN11-204ENST00000477531 ARHGEF1Q92888 912 aaKnown RBP21.07■□□□□ 0.96
CLDN11-204ENST00000477531 COL3A1P02461 1466 aaPredicted RBP21.07■□□□□ 0.96
CLDN11-204ENST00000477531 CRKLP46109 303 aaKnown RBP21.06■□□□□ 0.96
CLDN11-204ENST00000477531 GNAT3A8MTJ3 354 aa21.05■□□□□ 0.96
CLDN11-204ENST00000477531 MMP10P09238 476 aa21.05■□□□□ 0.96
CLDN11-204ENST00000477531 PPP2R1AP30153 589 aa21.05■□□□□ 0.96
CLDN11-204ENST00000477531 CHD4Q14839 1912 aa21.05■□□□□ 0.96
CLDN11-204ENST00000477531 GOLGB1Q14789 3259 aaKnown RBP21.05■□□□□ 0.96
CLDN11-204ENST00000477531 TEFQ10587 303 aa21.04■□□□□ 0.96
CLDN11-204ENST00000477531 SLC39A6Q13433 755 aa21.04■□□□□ 0.96
CLDN11-204ENST00000477531 TTC5Q8N0Z6 440 aa21.03■□□□□ 0.96
CLDN11-204ENST00000477531 ZNF784Q8NCA9 323 aaPredicted RBP21.03■□□□□ 0.96
CLDN11-204ENST00000477531 COL5A3P25940 1745 aaPredicted RBP21.02■□□□□ 0.96
CLDN11-204ENST00000477531 U2AF1L5P0DN76 240 aaPredicted RBP21.02■□□□□ 0.96
CLDN11-204ENST00000477531 YBX3P16989 372 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLDN11-204ENST00000477531 U2AF1Q01081 240 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLDN11-204ENST00000477531 DNAJC10Q8IXB1 793 aa21.02■□□□□ 0.96
CLDN11-204ENST00000477531 MRC1P22897 1456 aa21.01■□□□□ 0.95
CLDN11-204ENST00000477531 GYS1P13807 737 aa21.01■□□□□ 0.95
CLDN11-204ENST00000477531 PRKAR2BP31323 418 aa21.01■□□□□ 0.95
CLDN11-204ENST00000477531 CCDC87Q9NVE4 849 aa21.01■□□□□ 0.95
CLDN11-204ENST00000477531 PARP3Q9Y6F1 533 aa21.01■□□□□ 0.95
CLDN11-204ENST00000477531 VSIG10Q8N0Z9 540 aa21■□□□□ 0.95
CLDN11-204ENST00000477531 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
CLDN11-204ENST00000477531 INTS5Q6P9B9 1019 aaKnown RBP20.99■□□□□ 0.95
CLDN11-204ENST00000477531 MYH14Q7Z406 1995 aaKnown RBP20.99■□□□□ 0.95
CLDN11-204ENST00000477531 ZPR1O75312 459 aa20.98■□□□□ 0.95
CLDN11-204ENST00000477531 CYP19A1P11511 503 aaPredicted RBP20.98■□□□□ 0.95
CLDN11-204ENST00000477531 IL17REQ8NFR9 667 aa20.98■□□□□ 0.95
CLDN11-204ENST00000477531 FCHSD2O94868 740 aa20.97■□□□□ 0.95
CLDN11-204ENST00000477531 STARD3NLO95772 234 aa20.97■□□□□ 0.95
CLDN11-204ENST00000477531 NEFMP07197 916 aa20.96■□□□□ 0.95
CLDN11-204ENST00000477531 TGFB2P61812 414 aa20.96■□□□□ 0.95
CLDN11-204ENST00000477531 RTF1Q92541 710 aaKnown RBP20.96■□□□□ 0.95
CLDN11-204ENST00000477531 PHACTR3Q96KR7 559 aa20.96■□□□□ 0.95
CLDN11-204ENST00000477531 SRP68Q9UHB9 627 aaKnown RBP20.96■□□□□ 0.95
CLDN11-204ENST00000477531 VIRMAQ69YN4 1812 aaKnown RBP20.96■□□□□ 0.95
CLDN11-204ENST00000477531 USP42Q9H9J4 1324 aaKnown RBP20.96■□□□□ 0.95
CLDN11-204ENST00000477531 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
CLDN11-204ENST00000477531 TJP1Q07157 1748 aa20.95■□□□□ 0.94
CLDN11-204ENST00000477531 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.94
CLDN11-204ENST00000477531 WWC3Q9ULE0 1092 aa20.95■□□□□ 0.94
CLDN11-204ENST00000477531 CICQ96RK0 1608 aaPredicted RBP20.95■□□□□ 0.94
CLDN11-204ENST00000477531 FKBP8Q14318 412 aa20.94■□□□□ 0.94
CLDN11-204ENST00000477531 ZNF790Q6PG37 636 aa20.94■□□□□ 0.94
CLDN11-204ENST00000477531 SOS1Q07889 1333 aaPredicted RBP20.94■□□□□ 0.94
CLDN11-204ENST00000477531 KCPQ6ZWJ8 1503 aa20.94■□□□□ 0.94
CLDN11-204ENST00000477531 BTBD11A6QL63 1104 aa20.92■□□□□ 0.94
CLDN11-204ENST00000477531 FMNL2Q96PY5 1086 aa20.92■□□□□ 0.94
CLDN11-204ENST00000477531 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
CLDN11-204ENST00000477531 USPL1Q5W0Q7 1092 aa20.91■□□□□ 0.94
CLDN11-204ENST00000477531 NPM2Q86SE8 214 aaKnown RBP20.91■□□□□ 0.94
CLDN11-204ENST00000477531 CEMIPQ8WUJ3 1361 aa20.91■□□□□ 0.94
CLDN11-204ENST00000477531 ZNF496Q96IT1 587 aaPredicted RBP20.91■□□□□ 0.94
CLDN11-204ENST00000477531 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
CLDN11-204ENST00000477531 C10orf71Q711Q0 1435 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms