RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 CNTNAP3BQ96NU0 1288 aa7.09□□□□□ -1.27
RPL39-203ENST00000477403 CNTNAP3Q9BZ76 1288 aa7.09□□□□□ -1.27
RPL39-203ENST00000477403 TIMMDC1Q9NPL8 285 aa7.09□□□□□ -1.27
RPL39-203ENST00000477403 CUEDC1Q9NWM3 386 aaPredicted RBP7.09□□□□□ -1.27
RPL39-203ENST00000477403 NCOA4Q13772 614 aa7.08□□□□□ -1.28
RPL39-203ENST00000477403 TLR1Q15399 786 aa7.08□□□□□ -1.28
RPL39-203ENST00000477403 ZSCAN1Q8NBB4 408 aa7.08□□□□□ -1.28
RPL39-203ENST00000477403 NFATC2IPQ8NCF5 419 aa7.08□□□□□ -1.28
RPL39-203ENST00000477403 COL25A1Q9BXS0 654 aaPredicted RBP7.08□□□□□ -1.28
RPL39-203ENST00000477403 FHDC1Q9C0D6 1143 aaPredicted RBP7.08□□□□□ -1.28
RPL39-203ENST00000477403 NOD1Q9Y239 953 aa7.08□□□□□ -1.28
RPL39-203ENST00000477403 DYRK1BQ9Y463 629 aa7.08□□□□□ -1.28
RPL39-203ENST00000477403 HRH3Q9Y5N1 445 aa7.08□□□□□ -1.28
RPL39-203ENST00000477403 USP17L5A8MUK1 530 aa7.07□□□□□ -1.28
RPL39-203ENST00000477403 INHAP05111 366 aa7.07□□□□□ -1.28
RPL39-203ENST00000477403 SCNN1DP51172 638 aa7.07□□□□□ -1.28
RPL39-203ENST00000477403 GNASQ5JWF2 1037 aa7.07□□□□□ -1.28
RPL39-203ENST00000477403 FNBP4Q8N3X1 1017 aaPredicted RBP7.07□□□□□ -1.28
RPL39-203ENST00000477403 STK17AQ9UEE5 414 aa7.07□□□□□ -1.28
RPL39-203ENST00000477403 GTF2IP78347 998 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 KRT76Q01546 638 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 PSME1Q06323 249 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 WDR44Q5JSH3 913 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 TBC1D9Q6ZT07 1266 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 GLMNQ92990 594 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 UCN2Q96RP3 112 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 SERTAD1Q9UHV2 236 aa7.06□□□□□ -1.28
RPL39-203ENST00000477403 LZTS3O60299 673 aaPredicted RBP7.05□□□□□ -1.28
RPL39-203ENST00000477403 LORP23490 312 aaPredicted RBP7.05□□□□□ -1.28
RPL39-203ENST00000477403 DBN1Q16643 649 aa7.05□□□□□ -1.28
RPL39-203ENST00000477403 C4orf17Q53FE4 359 aa7.05□□□□□ -1.28
RPL39-203ENST00000477403 RNFT1Q5M7Z0 435 aa7.05□□□□□ -1.28
RPL39-203ENST00000477403 TRIM22Q8IYM9 498 aa7.05□□□□□ -1.28
RPL39-203ENST00000477403 ZNF837Q96EG3 531 aaPredicted RBP7.05□□□□□ -1.28
RPL39-203ENST00000477403 GPAMQ9HCL2 828 aa7.05□□□□□ -1.28
RPL39-203ENST00000477403 PCDHGA11Q9Y5H2 935 aa7.05□□□□□ -1.28
RPL39-203ENST00000477403 USP17L3A6NCW0 530 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 USP17L4A6NCW7 530 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 A6NJR5 290 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 TMEM229AB2RXF0 380 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 H7C1W4 665 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 GPR25O00155 361 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 USP17L2Q6R6M4 530 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 USP17L1Q7RTZ2 530 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 PPARGC1BQ86YN6 1023 aaKnown RBP7.04□□□□□ -1.28
RPL39-203ENST00000477403 RHBDD1Q8TEB9 315 aa7.04□□□□□ -1.28
RPL39-203ENST00000477403 FAM181BA6NEQ2 426 aa7.03□□□□□ -1.28
RPL39-203ENST00000477403 ATP9BO43861 1147 aa7.03□□□□□ -1.28
RPL39-203ENST00000477403 F11P03951 625 aa7.03□□□□□ -1.28
RPL39-203ENST00000477403 SMTNP53814 917 aa7.03□□□□□ -1.28
RPL39-203ENST00000477403 GMCL1Q96IK5 515 aa7.03□□□□□ -1.28
RPL39-203ENST00000477403 A0A1B0GTH6 734 aa7.02□□□□□ -1.29
RPL39-203ENST00000477403 PLA2G4AP47712 749 aa7.02□□□□□ -1.29
RPL39-203ENST00000477403 FOXR1Q6PIV2 292 aa7.02□□□□□ -1.29
RPL39-203ENST00000477403 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
RPL39-203ENST00000477403 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
RPL39-203ENST00000477403 GTPBP3Q969Y2 492 aaKnown RBP7.02□□□□□ -1.29
RPL39-203ENST00000477403 CALR3Q96L12 384 aaKnown RBP7.02□□□□□ -1.29
RPL39-203ENST00000477403 NUCKS1Q9H1E3 243 aaKnown RBP7.02□□□□□ -1.29
RPL39-203ENST00000477403 ATAD2BQ9ULI0 1458 aa7.02□□□□□ -1.29
RPL39-203ENST00000477403 PLEKHM2Q8IWE5 1019 aa7.01□□□□□ -1.29
RPL39-203ENST00000477403 RUBCNLQ9H714 662 aa7.01□□□□□ -1.29
RPL39-203ENST00000477403 A6NJY4 79 aa7□□□□□ -1.29
RPL39-203ENST00000477403 BACH1O14867 736 aa7□□□□□ -1.29
RPL39-203ENST00000477403 CSB-PGBD3P0DP91 1061 aa7□□□□□ -1.29
RPL39-203ENST00000477403 MSX1P28360 303 aa7□□□□□ -1.29
RPL39-203ENST00000477403 ATP1A2P50993 1020 aa7□□□□□ -1.29
RPL39-203ENST00000477403 GAS6Q14393 721 aa7□□□□□ -1.29
RPL39-203ENST00000477403 PGBD3Q8N328 593 aa7□□□□□ -1.29
RPL39-203ENST00000477403 TPCN2Q8NHX9 752 aa7□□□□□ -1.29
RPL39-203ENST00000477403 AIDAQ96BJ3 306 aa7□□□□□ -1.29
RPL39-203ENST00000477403 TRERF1Q96PN7 1200 aa7□□□□□ -1.29
RPL39-203ENST00000477403 SLC4A9Q96Q91 983 aa7□□□□□ -1.29
RPL39-203ENST00000477403 NIFKQ9BYG3 293 aaKnown RBP7□□□□□ -1.29
RPL39-203ENST00000477403 ZNF358Q9NW07 568 aa7□□□□□ -1.29
RPL39-203ENST00000477403 TFIP11Q9UBB9 837 aaKnown RBP7□□□□□ -1.29
RPL39-203ENST00000477403 MKRN1Q9UHC7 482 aaKnown RBP7□□□□□ -1.29
RPL39-203ENST00000477403 CLDN10P78369 228 aa6.99□□□□□ -1.29
RPL39-203ENST00000477403 MTFR1Q15390 333 aa6.99□□□□□ -1.29
RPL39-203ENST00000477403 CABP1Q9NZU7 370 aa6.99□□□□□ -1.29
RPL39-203ENST00000477403 KIAA1024Q9UPX6 916 aa6.99□□□□□ -1.29
RPL39-203ENST00000477403 USP3Q9Y6I4 520 aa6.99□□□□□ -1.29
RPL39-203ENST00000477403 CDK2AP1O14519 115 aa6.98□□□□□ -1.29
RPL39-203ENST00000477403 CCDC102BQ68D86 513 aa6.98□□□□□ -1.29
RPL39-203ENST00000477403 OGFOD1Q8N543 542 aa6.98□□□□□ -1.29
RPL39-203ENST00000477403 ZNF594Q96JF6 807 aaPredicted RBP6.98□□□□□ -1.29
RPL39-203ENST00000477403 DNAAF2Q9NVR5 837 aaKnown RBP6.98□□□□□ -1.29
RPL39-203ENST00000477403 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
RPL39-203ENST00000477403 PALM3A6NDB9 673 aaPredicted RBP6.97□□□□□ -1.29
RPL39-203ENST00000477403 ZBTB7BO15156 539 aaPredicted RBP6.97□□□□□ -1.29
RPL39-203ENST00000477403 ADAMTS2O95450 1211 aa6.97□□□□□ -1.29
RPL39-203ENST00000477403 THBS1P07996 1170 aa6.97□□□□□ -1.29
RPL39-203ENST00000477403 SRSF11Q05519 484 aaKnown RBP6.97□□□□□ -1.29
RPL39-203ENST00000477403 EFHC2Q5JST6 749 aa6.97□□□□□ -1.29
RPL39-203ENST00000477403 TNS4Q8IZW8 715 aa6.97□□□□□ -1.29
RPL39-203ENST00000477403 SVOPQ8N4V2 548 aa6.97□□□□□ -1.29
RPL39-203ENST00000477403 MBIPQ9NS73 344 aa6.97□□□□□ -1.29
RPL39-203ENST00000477403 IQSEC3Q9UPP2 1182 aaPredicted RBP6.97□□□□□ -1.29
RPL39-203ENST00000477403 MAFBQ9Y5Q3 323 aaPredicted RBP6.97□□□□□ -1.29
RPL39-203ENST00000477403 PARP3Q9Y6F1 533 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms