RNA–Protein interactions for RNA: ENST00000477188.1

MMACHC-202, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

TSL 3

Gene MMACHC, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-202ENST00000477188 A0A0G2JLW4 131 aa16.49■□□□□ 0.23
MMACHC-202ENST00000477188 NKX1-1Q15270 411 aaPredicted RBP16.49■□□□□ 0.23
MMACHC-202ENST00000477188 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
MMACHC-202ENST00000477188 KIF24Q5T7B8 1368 aa16.49■□□□□ 0.23
MMACHC-202ENST00000477188 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
MMACHC-202ENST00000477188 ARFGEF1Q9Y6D6 1849 aa16.48■□□□□ 0.23
MMACHC-202ENST00000477188 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
MMACHC-202ENST00000477188 ARHGAP27Q6ZUM4 889 aa16.48■□□□□ 0.23
MMACHC-202ENST00000477188 KDRP35968 1356 aa16.47■□□□□ 0.23
MMACHC-202ENST00000477188 DPEP1P16444 411 aa16.46■□□□□ 0.23
MMACHC-202ENST00000477188 SPG7Q9UQ90 795 aa16.46■□□□□ 0.23
MMACHC-202ENST00000477188 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
MMACHC-202ENST00000477188 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
MMACHC-202ENST00000477188 FCHSD2O94868 740 aa16.45■□□□□ 0.22
MMACHC-202ENST00000477188 TGFB2P61812 414 aa16.45■□□□□ 0.22
MMACHC-202ENST00000477188 COL13A1Q5TAT6 717 aaPredicted RBP16.45■□□□□ 0.22
MMACHC-202ENST00000477188 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
MMACHC-202ENST00000477188 CAPN15O75808 1086 aa16.44■□□□□ 0.22
MMACHC-202ENST00000477188 C9orf131Q5VYM1 1079 aa16.44■□□□□ 0.22
MMACHC-202ENST00000477188 PCNTO95613 3336 aa16.44■□□□□ 0.22
MMACHC-202ENST00000477188 MYH14Q7Z406 1995 aaKnown RBP16.44■□□□□ 0.22
MMACHC-202ENST00000477188 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
MMACHC-202ENST00000477188 PHKG2P15735 406 aa16.43■□□□□ 0.22
MMACHC-202ENST00000477188 TMF1P82094 1093 aa16.43■□□□□ 0.22
MMACHC-202ENST00000477188 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
MMACHC-202ENST00000477188 KLRG1Q96E93 195 aa16.43■□□□□ 0.22
MMACHC-202ENST00000477188 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
MMACHC-202ENST00000477188 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
MMACHC-202ENST00000477188 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
MMACHC-202ENST00000477188 TNRC6CQ9HCJ0 1690 aaKnown RBP16.43■□□□□ 0.22
MMACHC-202ENST00000477188 PLEKHG2Q9H7P9 1386 aa16.42■□□□□ 0.22
MMACHC-202ENST00000477188 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
MMACHC-202ENST00000477188 EYA1Q99502 592 aa16.42■□□□□ 0.22
MMACHC-202ENST00000477188 GYS1P13807 737 aa16.41■□□□□ 0.22
MMACHC-202ENST00000477188 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
MMACHC-202ENST00000477188 NLGN1Q8N2Q7 840 aa16.41■□□□□ 0.22
MMACHC-202ENST00000477188 ARHGEF1Q92888 912 aaKnown RBP16.41■□□□□ 0.22
MMACHC-202ENST00000477188 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
MMACHC-202ENST00000477188 SBF1O95248 1867 aa16.41■□□□□ 0.22
MMACHC-202ENST00000477188 KCNA3P22001 575 aa16.4■□□□□ 0.22
MMACHC-202ENST00000477188 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
MMACHC-202ENST00000477188 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
MMACHC-202ENST00000477188 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
MMACHC-202ENST00000477188 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
MMACHC-202ENST00000477188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
MMACHC-202ENST00000477188 PARP3Q9Y6F1 533 aa16.39■□□□□ 0.21
MMACHC-202ENST00000477188 RFC4P35249 363 aa16.38■□□□□ 0.21
MMACHC-202ENST00000477188 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
MMACHC-202ENST00000477188 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
MMACHC-202ENST00000477188 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
MMACHC-202ENST00000477188 TJP1Q07157 1748 aa16.37■□□□□ 0.21
MMACHC-202ENST00000477188 ADRA2BP18089 450 aa16.37■□□□□ 0.21
MMACHC-202ENST00000477188 FSTL1Q12841 308 aa16.37■□□□□ 0.21
MMACHC-202ENST00000477188 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
MMACHC-202ENST00000477188 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
MMACHC-202ENST00000477188 TNS4Q8IZW8 715 aa16.36■□□□□ 0.21
MMACHC-202ENST00000477188 RRAGCQ9HB90 399 aa16.36■□□□□ 0.21
MMACHC-202ENST00000477188 SRP68Q9UHB9 627 aaKnown RBP16.36■□□□□ 0.21
MMACHC-202ENST00000477188 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
MMACHC-202ENST00000477188 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
MMACHC-202ENST00000477188 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
MMACHC-202ENST00000477188 CHRNA5P30532 468 aa16.35■□□□□ 0.21
MMACHC-202ENST00000477188 DDR1Q08345 913 aa16.35■□□□□ 0.21
MMACHC-202ENST00000477188 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
MMACHC-202ENST00000477188 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
MMACHC-202ENST00000477188 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
MMACHC-202ENST00000477188 DALRD3Q5D0E6 543 aaKnown RBP16.34■□□□□ 0.21
MMACHC-202ENST00000477188 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
MMACHC-202ENST00000477188 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.21
MMACHC-202ENST00000477188 FKBP8Q14318 412 aa16.33■□□□□ 0.2
MMACHC-202ENST00000477188 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
MMACHC-202ENST00000477188 RASSF7Q02833 373 aa16.32■□□□□ 0.2
MMACHC-202ENST00000477188 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
MMACHC-202ENST00000477188 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
MMACHC-202ENST00000477188 PTCD1O75127 700 aaKnown RBP16.31■□□□□ 0.2
MMACHC-202ENST00000477188 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
MMACHC-202ENST00000477188 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
MMACHC-202ENST00000477188 CDCA8Q53HL2 280 aa16.31■□□□□ 0.2
MMACHC-202ENST00000477188 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
MMACHC-202ENST00000477188 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
MMACHC-202ENST00000477188 PRELPP51888 382 aa16.3■□□□□ 0.2
MMACHC-202ENST00000477188 CABP4P57796 275 aa16.3■□□□□ 0.2
MMACHC-202ENST00000477188 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
MMACHC-202ENST00000477188 ZNF530Q6P9A1 599 aaPredicted RBP16.29■□□□□ 0.2
MMACHC-202ENST00000477188 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
MMACHC-202ENST00000477188 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
MMACHC-202ENST00000477188 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
MMACHC-202ENST00000477188 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
MMACHC-202ENST00000477188 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.2
MMACHC-202ENST00000477188 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
MMACHC-202ENST00000477188 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
MMACHC-202ENST00000477188 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
MMACHC-202ENST00000477188 MTHFSP49914 203 aa16.24■□□□□ 0.19
MMACHC-202ENST00000477188 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
MMACHC-202ENST00000477188 INTS5Q6P9B9 1019 aaKnown RBP16.24■□□□□ 0.19
MMACHC-202ENST00000477188 NFATC2IPQ8NCF5 419 aa16.24■□□□□ 0.19
MMACHC-202ENST00000477188 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
MMACHC-202ENST00000477188 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
MMACHC-202ENST00000477188 LMNB1P20700 586 aa16.23■□□□□ 0.19
MMACHC-202ENST00000477188 TM4SF1P30408 202 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms