RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 C4BP0C0L5 1744 aa23.22■■□□□ 1.31
SMARCD3-210ENST00000477169 ATP6V1AP38606 617 aa23.2■■□□□ 1.3
SMARCD3-210ENST00000477169 C1orf141Q5JVX7 400 aa23.2■■□□□ 1.3
SMARCD3-210ENST00000477169 LINC00116Q8NCU8 138 aa23.18■■□□□ 1.3
SMARCD3-210ENST00000477169 CABP4P57796 275 aa23.17■■□□□ 1.3
SMARCD3-210ENST00000477169 ITPK1Q13572 414 aa23.17■■□□□ 1.3
SMARCD3-210ENST00000477169 KLHL34Q8N239 644 aa23.17■■□□□ 1.3
SMARCD3-210ENST00000477169 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
SMARCD3-210ENST00000477169 SSFA2P28290 1259 aa23.16■■□□□ 1.3
SMARCD3-210ENST00000477169 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
SMARCD3-210ENST00000477169 UBR3Q6ZT12 1888 aa23.15■■□□□ 1.3
SMARCD3-210ENST00000477169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
SMARCD3-210ENST00000477169 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
SMARCD3-210ENST00000477169 PPP2R1AP30153 589 aa23.15■■□□□ 1.3
SMARCD3-210ENST00000477169 AMIGO3Q86WK7 504 aa23.15■■□□□ 1.3
SMARCD3-210ENST00000477169 PHF14O94880 888 aa23.14■■□□□ 1.29
SMARCD3-210ENST00000477169 UTRNP46939 3433 aa23.14■■□□□ 1.29
SMARCD3-210ENST00000477169 RALBP1Q15311 655 aa23.13■■□□□ 1.29
SMARCD3-210ENST00000477169 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
SMARCD3-210ENST00000477169 RBM42Q9BTD8 480 aaKnown RBP23.13■■□□□ 1.29
SMARCD3-210ENST00000477169 GPR162Q16538 588 aa23.12■■□□□ 1.29
SMARCD3-210ENST00000477169 NFATC2IPQ8NCF5 419 aa23.12■■□□□ 1.29
SMARCD3-210ENST00000477169 SLC4A9Q96Q91 983 aa23.12■■□□□ 1.29
SMARCD3-210ENST00000477169 ZNF831Q5JPB2 1677 aa23.12■■□□□ 1.29
SMARCD3-210ENST00000477169 GNPATO15228 680 aa23.11■■□□□ 1.29
SMARCD3-210ENST00000477169 HMOX1P09601 288 aa23.11■■□□□ 1.29
SMARCD3-210ENST00000477169 SMIM5Q71RC9 77 aa23.11■■□□□ 1.29
SMARCD3-210ENST00000477169 NLGN2Q8NFZ4 835 aa23.1■■□□□ 1.29
SMARCD3-210ENST00000477169 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
SMARCD3-210ENST00000477169 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
SMARCD3-210ENST00000477169 CD2APQ9Y5K6 639 aa23.08■■□□□ 1.29
SMARCD3-210ENST00000477169 SCN11AQ9UI33 1791 aa23.07■■□□□ 1.28
SMARCD3-210ENST00000477169 RTCBQ9Y3I0 505 aaKnown RBP23.07■■□□□ 1.28
SMARCD3-210ENST00000477169 COL3A1P02461 1466 aaPredicted RBP23.06■■□□□ 1.28
SMARCD3-210ENST00000477169 MTHFSDQ2M296 383 aaKnown RBP23.06■■□□□ 1.28
SMARCD3-210ENST00000477169 TRAPPC3LQ5T215 181 aa23.06■■□□□ 1.28
SMARCD3-210ENST00000477169 LGR6Q9HBX8 967 aa23.06■■□□□ 1.28
SMARCD3-210ENST00000477169 CHD4Q14839 1912 aa23.06■■□□□ 1.28
SMARCD3-210ENST00000477169 CNTNAP4Q9C0A0 1308 aa23.06■■□□□ 1.28
SMARCD3-210ENST00000477169 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
SMARCD3-210ENST00000477169 SLC52A2Q9HAB3 445 aa23.05■■□□□ 1.28
SMARCD3-210ENST00000477169 MYBBP1AQ9BQG0 1328 aaKnown RBP23.05■■□□□ 1.28
SMARCD3-210ENST00000477169 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-210ENST00000477169 ADRA2BP18089 450 aa23.04■■□□□ 1.28
SMARCD3-210ENST00000477169 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-210ENST00000477169 COL5A3P25940 1745 aaPredicted RBP23.03■■□□□ 1.28
SMARCD3-210ENST00000477169 U2SURPO15042 1029 aaKnown RBP23.03■■□□□ 1.28
SMARCD3-210ENST00000477169 RPS6KA4O75676 772 aa23.03■■□□□ 1.28
SMARCD3-210ENST00000477169 CFAP53Q96M91 514 aa23.03■■□□□ 1.28
SMARCD3-210ENST00000477169 ARHGEF1Q92888 912 aaKnown RBP23.02■■□□□ 1.28
SMARCD3-210ENST00000477169 GOLGB1Q14789 3259 aaKnown RBP23.01■■□□□ 1.27
SMARCD3-210ENST00000477169 GRIN3BO60391 1043 aa23■■□□□ 1.27
SMARCD3-210ENST00000477169 NLGN1Q8N2Q7 840 aa23■■□□□ 1.27
SMARCD3-210ENST00000477169 ANP32CO43423 234 aa22.99■■□□□ 1.27
SMARCD3-210ENST00000477169 MRC1P22897 1456 aa22.98■■□□□ 1.27
SMARCD3-210ENST00000477169 MYH14Q7Z406 1995 aaKnown RBP22.98■■□□□ 1.27
SMARCD3-210ENST00000477169 YBX3P16989 372 aaKnown RBP eCLIP22.98■■□□□ 1.27
SMARCD3-210ENST00000477169 RFC4P35249 363 aa22.98■■□□□ 1.27
SMARCD3-210ENST00000477169 CRKLP46109 303 aaKnown RBP22.98■■□□□ 1.27
SMARCD3-210ENST00000477169 ZNF784Q8NCA9 323 aaPredicted RBP22.98■■□□□ 1.27
SMARCD3-210ENST00000477169 MMP10P09238 476 aa22.97■■□□□ 1.27
SMARCD3-210ENST00000477169 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
SMARCD3-210ENST00000477169 CICQ96RK0 1608 aaPredicted RBP22.97■■□□□ 1.27
SMARCD3-210ENST00000477169 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
SMARCD3-210ENST00000477169 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
SMARCD3-210ENST00000477169 GYS1P13807 737 aa22.95■■□□□ 1.26
SMARCD3-210ENST00000477169 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
SMARCD3-210ENST00000477169 NUDCQ9Y266 331 aa22.95■■□□□ 1.26
SMARCD3-210ENST00000477169 TJP1Q07157 1748 aa22.94■■□□□ 1.26
SMARCD3-210ENST00000477169 GNAT3A8MTJ3 354 aa22.94■■□□□ 1.26
SMARCD3-210ENST00000477169 INTS5Q6P9B9 1019 aaKnown RBP22.93■■□□□ 1.26
SMARCD3-210ENST00000477169 DNAJC10Q8IXB1 793 aa22.93■■□□□ 1.26
SMARCD3-210ENST00000477169 VSIG10Q8N0Z9 540 aa22.92■■□□□ 1.26
SMARCD3-210ENST00000477169 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
SMARCD3-210ENST00000477169 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
SMARCD3-210ENST00000477169 CCDC87Q9NVE4 849 aa22.91■■□□□ 1.26
SMARCD3-210ENST00000477169 CYP19A1P11511 503 aaPredicted RBP22.9■■□□□ 1.26
SMARCD3-210ENST00000477169 PRKAR2BP31323 418 aa22.9■■□□□ 1.26
SMARCD3-210ENST00000477169 TEFQ10587 303 aa22.9■■□□□ 1.26
SMARCD3-210ENST00000477169 PHACTR3Q96KR7 559 aa22.9■■□□□ 1.26
SMARCD3-210ENST00000477169 KCPQ6ZWJ8 1503 aa22.89■■□□□ 1.26
SMARCD3-210ENST00000477169 C4AP0C0L4 1744 aa22.89■■□□□ 1.26
SMARCD3-210ENST00000477169 PARP3Q9Y6F1 533 aa22.89■■□□□ 1.25
SMARCD3-210ENST00000477169 USP42Q9H9J4 1324 aaKnown RBP22.88■■□□□ 1.25
SMARCD3-210ENST00000477169 U2AF1L5P0DN76 240 aaPredicted RBP22.88■■□□□ 1.25
SMARCD3-210ENST00000477169 TGFB2P61812 414 aa22.88■■□□□ 1.25
SMARCD3-210ENST00000477169 U2AF1Q01081 240 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMARCD3-210ENST00000477169 TTC5Q8N0Z6 440 aa22.88■■□□□ 1.25
SMARCD3-210ENST00000477169 FCHSD2O94868 740 aa22.87■■□□□ 1.25
SMARCD3-210ENST00000477169 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
SMARCD3-210ENST00000477169 SRP68Q9UHB9 627 aaKnown RBP22.87■■□□□ 1.25
SMARCD3-210ENST00000477169 KIF13BQ9NQT8 1826 aa22.87■■□□□ 1.25
SMARCD3-210ENST00000477169 CCDC184Q52MB2 194 aa22.86■■□□□ 1.25
SMARCD3-210ENST00000477169 SOS1Q07889 1333 aaPredicted RBP22.85■■□□□ 1.25
SMARCD3-210ENST00000477169 ZPR1O75312 459 aa22.85■■□□□ 1.25
SMARCD3-210ENST00000477169 FKBP8Q14318 412 aa22.85■■□□□ 1.25
SMARCD3-210ENST00000477169 ZNF790Q6PG37 636 aa22.85■■□□□ 1.25
SMARCD3-210ENST00000477169 UBR2Q8IWV8 1755 aa22.85■■□□□ 1.25
SMARCD3-210ENST00000477169 CEMIPQ8WUJ3 1361 aa22.85■■□□□ 1.25
SMARCD3-210ENST00000477169 C10orf71Q711Q0 1435 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms