RNA–Protein interactions for RNA: ENST00000476953.6

PHF11-208, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-208ENST00000476953 C1orf141Q5JVX7 400 aa27.3■■□□□ 1.96
PHF11-208ENST00000476953 SLC4A9Q96Q91 983 aa27.3■■□□□ 1.96
PHF11-208ENST00000476953 FHDC1Q9C0D6 1143 aaPredicted RBP27.3■■□□□ 1.96
PHF11-208ENST00000476953 TJP1Q07157 1748 aa27.29■■□□□ 1.96
PHF11-208ENST00000476953 MYH14Q7Z406 1995 aaKnown RBP27.28■■□□□ 1.96
PHF11-208ENST00000476953 SLC16A10Q8TF71 515 aa27.28■■□□□ 1.96
PHF11-208ENST00000476953 MRC1P22897 1456 aa27.27■■□□□ 1.96
PHF11-208ENST00000476953 MSH5O43196 834 aa27.26■■□□□ 1.95
PHF11-208ENST00000476953 PPP2R1AP30153 589 aa27.26■■□□□ 1.95
PHF11-208ENST00000476953 ATP6V1AP38606 617 aa27.26■■□□□ 1.95
PHF11-208ENST00000476953 CABP4P57796 275 aa27.26■■□□□ 1.95
PHF11-208ENST00000476953 MTHFSDQ2M296 383 aaKnown RBP27.26■■□□□ 1.95
PHF11-208ENST00000476953 ARXQ96QS3 562 aa27.26■■□□□ 1.95
PHF11-208ENST00000476953 U2SURPO15042 1029 aaKnown RBP27.25■■□□□ 1.95
PHF11-208ENST00000476953 MSL1Q68DK7 614 aa27.25■■□□□ 1.95
PHF11-208ENST00000476953 LGR6Q9HBX8 967 aa27.25■■□□□ 1.95
PHF11-208ENST00000476953 CICQ96RK0 1608 aaPredicted RBP27.25■■□□□ 1.95
PHF11-208ENST00000476953 AKAP4Q5JQC9 854 aa27.24■■□□□ 1.95
PHF11-208ENST00000476953 AK7Q96M32 723 aa27.24■■□□□ 1.95
PHF11-208ENST00000476953 SYT17Q9BSW7 474 aa27.24■■□□□ 1.95
PHF11-208ENST00000476953 PHF14O94880 888 aa27.23■■□□□ 1.95
PHF11-208ENST00000476953 NFATC2IPQ8NCF5 419 aa27.23■■□□□ 1.95
PHF11-208ENST00000476953 SIPA1L3O60292 1781 aaPredicted RBP27.22■■□□□ 1.95
PHF11-208ENST00000476953 C4AP0C0L4 1744 aa27.22■■□□□ 1.95
PHF11-208ENST00000476953 RBM42Q9BTD8 480 aaKnown RBP27.22■■□□□ 1.95
PHF11-208ENST00000476953 RNMTO43148 476 aaKnown RBP27.2■■□□□ 1.94
PHF11-208ENST00000476953 MAP3K5Q99683 1374 aa27.2■■□□□ 1.94
PHF11-208ENST00000476953 UBR2Q8IWV8 1755 aa27.2■■□□□ 1.94
PHF11-208ENST00000476953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.19■■□□□ 1.94
PHF11-208ENST00000476953 GNPATO15228 680 aa27.18■■□□□ 1.94
PHF11-208ENST00000476953 POLD1P28340 1107 aa27.18■■□□□ 1.94
PHF11-208ENST00000476953 KCPQ6ZWJ8 1503 aa27.17■■□□□ 1.94
PHF11-208ENST00000476953 PTCD1O75127 700 aaKnown RBP27.17■■□□□ 1.94
PHF11-208ENST00000476953 SLC52A2Q9HAB3 445 aa27.17■■□□□ 1.94
PHF11-208ENST00000476953 UTRNP46939 3433 aa27.16■■□□□ 1.94
PHF11-208ENST00000476953 KLHL34Q8N239 644 aa27.16■■□□□ 1.94
PHF11-208ENST00000476953 SSFA2P28290 1259 aa27.15■■□□□ 1.94
PHF11-208ENST00000476953 FLAD1Q8NFF5 587 aa27.15■■□□□ 1.94
PHF11-208ENST00000476953 CFAP53Q96M91 514 aa27.15■■□□□ 1.94
PHF11-208ENST00000476953 RSPH6AQ9H0K4 717 aa27.15■■□□□ 1.94
PHF11-208ENST00000476953 PRKAR2BP31323 418 aa27.13■■□□□ 1.93
PHF11-208ENST00000476953 SLC39A6Q13433 755 aa27.13■■□□□ 1.93
PHF11-208ENST00000476953 PHACTR3Q96KR7 559 aa27.13■■□□□ 1.93
PHF11-208ENST00000476953 HMGB2P26583 209 aaKnown RBP27.12■■□□□ 1.93
PHF11-208ENST00000476953 NLGN2Q8NFZ4 835 aa27.12■■□□□ 1.93
PHF11-208ENST00000476953 CNTNAP4Q9C0A0 1308 aa27.12■■□□□ 1.93
PHF11-208ENST00000476953 DLG5Q8TDM6 1919 aa27.11■■□□□ 1.93
PHF11-208ENST00000476953 U2AF1L5P0DN76 240 aaPredicted RBP27.08■■□□□ 1.93
PHF11-208ENST00000476953 U2AF1Q01081 240 aaKnown RBP eCLIP27.08■■□□□ 1.93
PHF11-208ENST00000476953 IL17REQ8NFR9 667 aa27.08■■□□□ 1.93
PHF11-208ENST00000476953 GOLGB1Q14789 3259 aaKnown RBP27.08■■□□□ 1.93
PHF11-208ENST00000476953 CHD4Q14839 1912 aa27.08■■□□□ 1.93
PHF11-208ENST00000476953 RC3H1Q5TC82 1133 aaKnown RBP27.07■■□□□ 1.92
PHF11-208ENST00000476953 GAS2L2Q8NHY3 880 aa27.07■■□□□ 1.92
PHF11-208ENST00000476953 CRKLP46109 303 aaKnown RBP27.06■■□□□ 1.92
PHF11-208ENST00000476953 NUDCQ9Y266 331 aa27.06■■□□□ 1.92
PHF11-208ENST00000476953 RTCBQ9Y3I0 505 aaKnown RBP27.06■■□□□ 1.92
PHF11-208ENST00000476953 GNAT3A8MTJ3 354 aa27.05■■□□□ 1.92
PHF11-208ENST00000476953 DDX10Q13206 875 aaKnown RBP27.05■■□□□ 1.92
PHF11-208ENST00000476953 DNAJC10Q8IXB1 793 aa27.05■■□□□ 1.92
PHF11-208ENST00000476953 RPS6KA4O75676 772 aa27.04■■□□□ 1.92
PHF11-208ENST00000476953 CEMIPQ8WUJ3 1361 aa27.03■■□□□ 1.92
PHF11-208ENST00000476953 ARHGEF1Q92888 912 aaKnown RBP27.03■■□□□ 1.92
PHF11-208ENST00000476953 KIAA1551Q9HCM1 1747 aa27.03■■□□□ 1.92
PHF11-208ENST00000476953 KIF13BQ9NQT8 1826 aa27.03■■□□□ 1.92
PHF11-208ENST00000476953 TRAPPC3LQ5T215 181 aa27.02■■□□□ 1.92
PHF11-208ENST00000476953 DCAF8L1A6NGE4 600 aa27.01■■□□□ 1.91
PHF11-208ENST00000476953 INTS5Q6P9B9 1019 aaKnown RBP27.01■■□□□ 1.91
PHF11-208ENST00000476953 FCHSD2O94868 740 aa26.99■■□□□ 1.91
PHF11-208ENST00000476953 YY1P25490 414 aa26.99■■□□□ 1.91
PHF11-208ENST00000476953 ADRA2BP18089 450 aa26.98■■□□□ 1.91
PHF11-208ENST00000476953 N4BP2Q86UW6 1770 aaPredicted RBP26.98■■□□□ 1.91
PHF11-208ENST00000476953 CYP19A1P11511 503 aaPredicted RBP26.97■■□□□ 1.91
PHF11-208ENST00000476953 GYS1P13807 737 aa26.97■■□□□ 1.91
PHF11-208ENST00000476953 TEFQ10587 303 aa26.97■■□□□ 1.91
PHF11-208ENST00000476953 SRP68Q9UHB9 627 aaKnown RBP26.97■■□□□ 1.91
PHF11-208ENST00000476953 MMP10P09238 476 aa26.96■■□□□ 1.91
PHF11-208ENST00000476953 CCDC87Q9NVE4 849 aa26.96■■□□□ 1.91
PHF11-208ENST00000476953 KCNQ3O43525 872 aa26.95■■□□□ 1.9
PHF11-208ENST00000476953 YBX3P16989 372 aaKnown RBP eCLIP26.95■■□□□ 1.9
PHF11-208ENST00000476953 DCTN1Q14203 1278 aa26.95■■□□□ 1.9
PHF11-208ENST00000476953 MCM10Q7L590 875 aa26.95■■□□□ 1.9
PHF11-208ENST00000476953 PELP1Q8IZL8 1130 aaKnown RBP26.95■■□□□ 1.9
PHF11-208ENST00000476953 ZNF496Q96IT1 587 aaPredicted RBP26.95■■□□□ 1.9
PHF11-208ENST00000476953 ZBTB1Q9Y2K1 713 aa26.95■■□□□ 1.9
PHF11-208ENST00000476953 RFC4P35249 363 aa26.94■■□□□ 1.9
PHF11-208ENST00000476953 GPR162Q16538 588 aa26.94■■□□□ 1.9
PHF11-208ENST00000476953 ZNF790Q6PG37 636 aa26.94■■□□□ 1.9
PHF11-208ENST00000476953 CD2APQ9Y5K6 639 aa26.94■■□□□ 1.9
PHF11-208ENST00000476953 SOS1Q07889 1333 aaPredicted RBP26.93■■□□□ 1.9
PHF11-208ENST00000476953 USP42Q9H9J4 1324 aaKnown RBP26.93■■□□□ 1.9
PHF11-208ENST00000476953 TTC5Q8N0Z6 440 aa26.93■■□□□ 1.9
PHF11-208ENST00000476953 PLEKHF1Q96S99 279 aa26.92■■□□□ 1.9
PHF11-208ENST00000476953 HEG1Q9ULI3 1381 aa26.92■■□□□ 1.9
PHF11-208ENST00000476953 AFDNP55196 1824 aaKnown RBP26.91■■□□□ 1.9
PHF11-208ENST00000476953 RALBP1Q15311 655 aa26.91■■□□□ 1.9
PHF11-208ENST00000476953 VSIG10Q8N0Z9 540 aa26.91■■□□□ 1.9
PHF11-208ENST00000476953 KDM3BQ7LBC6 1761 aa26.91■■□□□ 1.9
PHF11-208ENST00000476953 BRCA1P38398 1863 aaKnown RBP26.9■■□□□ 1.9
PHF11-208ENST00000476953 COL15A1P39059 1388 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms