RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 EYA1Q99502 592 aa11.28□□□□□ -0.6
KPNA1-206ENST00000476916 EEA1Q15075 1411 aa11.27□□□□□ -0.6
KPNA1-206ENST00000476916 RPRD2Q5VT52 1461 aaKnown RBP11.27□□□□□ -0.6
KPNA1-206ENST00000476916 NEXMIFQ5QGS0 1516 aa11.27□□□□□ -0.61
KPNA1-206ENST00000476916 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
KPNA1-206ENST00000476916 FAM196AQ6ZSG2 479 aa11.27□□□□□ -0.61
KPNA1-206ENST00000476916 PITPNM2Q9BZ72 1349 aa11.27□□□□□ -0.61
KPNA1-206ENST00000476916 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
KPNA1-206ENST00000476916 YBX3P16989 372 aaKnown RBP eCLIP11.26□□□□□ -0.61
KPNA1-206ENST00000476916 GJA5P36382 358 aa11.26□□□□□ -0.61
KPNA1-206ENST00000476916 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
KPNA1-206ENST00000476916 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
KPNA1-206ENST00000476916 TBX22Q9Y458 520 aa11.26□□□□□ -0.61
KPNA1-206ENST00000476916 NUDT7P0C024 238 aa11.25□□□□□ -0.61
KPNA1-206ENST00000476916 PRDM10Q9NQV6 1147 aa11.25□□□□□ -0.61
KPNA1-206ENST00000476916 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
KPNA1-206ENST00000476916 PLCH1Q4KWH8 1693 aa11.24□□□□□ -0.61
KPNA1-206ENST00000476916 CSB-PGBD3P0DP91 1061 aa11.24□□□□□ -0.61
KPNA1-206ENST00000476916 SULF1Q8IWU6 871 aa11.24□□□□□ -0.61
KPNA1-206ENST00000476916 PLEKHG1Q9ULL1 1385 aa11.24□□□□□ -0.61
KPNA1-206ENST00000476916 TRPM2O94759 1503 aa11.24□□□□□ -0.61
KPNA1-206ENST00000476916 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
KPNA1-206ENST00000476916 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
KPNA1-206ENST00000476916 ADGRL3Q9HAR2 1447 aa11.23□□□□□ -0.61
KPNA1-206ENST00000476916 C1orf167Q5SNV9 1468 aa11.23□□□□□ -0.61
KPNA1-206ENST00000476916 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
KPNA1-206ENST00000476916 THSD7AQ9UPZ6 1657 aa11.23□□□□□ -0.61
KPNA1-206ENST00000476916 LILRB3O75022 631 aa11.22□□□□□ -0.61
KPNA1-206ENST00000476916 NOS1P29475 1434 aa11.22□□□□□ -0.61
KPNA1-206ENST00000476916 CCDC27Q2M243 656 aa11.22□□□□□ -0.61
KPNA1-206ENST00000476916 ARSIQ5FYB1 569 aa11.22□□□□□ -0.61
KPNA1-206ENST00000476916 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
KPNA1-206ENST00000476916 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.611e-6■■□□□ 13.5
KPNA1-206ENST00000476916 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
KPNA1-206ENST00000476916 PTPN23Q9H3S7 1636 aa11.21□□□□□ -0.61
KPNA1-206ENST00000476916 MOXD2PA6NHM9 499 aa11.21□□□□□ -0.61
KPNA1-206ENST00000476916 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
KPNA1-206ENST00000476916 COL9A1P20849 921 aa11.21□□□□□ -0.61
KPNA1-206ENST00000476916 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
KPNA1-206ENST00000476916 GPR153Q6NV75 609 aa11.21□□□□□ -0.61
KPNA1-206ENST00000476916 MPNDQ8N594 471 aa11.21□□□□□ -0.61
KPNA1-206ENST00000476916 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
KPNA1-206ENST00000476916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
KPNA1-206ENST00000476916 DNAJB2P25686 324 aa11.2□□□□□ -0.62
KPNA1-206ENST00000476916 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
KPNA1-206ENST00000476916 CCDC85CA6NKD9 419 aa11.19□□□□□ -0.62
KPNA1-206ENST00000476916 QPCTQ16769 361 aa11.19□□□□□ -0.62
KPNA1-206ENST00000476916 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
KPNA1-206ENST00000476916 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
KPNA1-206ENST00000476916 ORAI2Q96SN7 254 aa11.19□□□□□ -0.62
KPNA1-206ENST00000476916 BCL2L12Q9HB09 334 aa11.19□□□□□ -0.62
KPNA1-206ENST00000476916 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
KPNA1-206ENST00000476916 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
KPNA1-206ENST00000476916 RFX1P22670 979 aa11.18□□□□□ -0.62
KPNA1-206ENST00000476916 SND1Q7KZF4 910 aaKnown RBP eCLIP11.18□□□□□ -0.62
KPNA1-206ENST00000476916 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
KPNA1-206ENST00000476916 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
KPNA1-206ENST00000476916 RGPD4Q7Z3J3 1758 aa11.18□□□□□ -0.62
KPNA1-206ENST00000476916 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 NDUFV2P19404 249 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 NLGN2Q8NFZ4 835 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 PCDHB15Q9Y5E8 787 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 CEP152O94986 1710 aa11.17□□□□□ -0.62
KPNA1-206ENST00000476916 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
KPNA1-206ENST00000476916 FOXN1O15353 648 aa11.16□□□□□ -0.62
KPNA1-206ENST00000476916 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
KPNA1-206ENST00000476916 PRPF38BQ5VTL8 546 aaKnown RBP11.16□□□□□ -0.62
KPNA1-206ENST00000476916 ADAMTS19Q8TE59 1207 aa11.16□□□□□ -0.62
KPNA1-206ENST00000476916 PXDNQ92626 1479 aa11.16□□□□□ -0.62
KPNA1-206ENST00000476916 ADAMTS13Q76LX8 1427 aa11.16□□□□□ -0.62
KPNA1-206ENST00000476916 PTPRUQ92729 1446 aa11.16□□□□□ -0.62
KPNA1-206ENST00000476916 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 NBPF26B4DH59 902 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 AP1G2O75843 785 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 IDI1Q13907 227 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 TATDN2Q93075 761 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
KPNA1-206ENST00000476916 NRAPQ86VF7 1730 aa11.15□□□□□ -0.63
KPNA1-206ENST00000476916 DHX57Q6P158 1386 aaKnown RBP11.15□□□□□ -0.63
KPNA1-206ENST00000476916 FSTL1Q12841 308 aa11.14□□□□□ -0.63
KPNA1-206ENST00000476916 ARHGAP31Q2M1Z3 1444 aa11.14□□□□□ -0.63
KPNA1-206ENST00000476916 A0A0C4DFX4 3053 aa11.14□□□□□ -0.63
KPNA1-206ENST00000476916 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
KPNA1-206ENST00000476916 TRIM6-TRIM34B2RNG4 842 aa11.13□□□□□ -0.63
KPNA1-206ENST00000476916 USP17L8P0C7I0 530 aa11.13□□□□□ -0.63
KPNA1-206ENST00000476916 WASHC4Q2M389 1173 aa11.13□□□□□ -0.63
KPNA1-206ENST00000476916 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
KPNA1-206ENST00000476916 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
KPNA1-206ENST00000476916 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
KPNA1-206ENST00000476916 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
KPNA1-206ENST00000476916 PTPREP23469 700 aa11.12□□□□□ -0.63
KPNA1-206ENST00000476916 VRTNQ9H8Y1 702 aa11.12□□□□□ -0.63
KPNA1-206ENST00000476916 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms