RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
RPGR-207ENST00000476559 UCN2Q96RP3 112 aa12.07□□□□□ -0.48
RPGR-207ENST00000476559 SERTAD1Q9UHV2 236 aa12.07□□□□□ -0.48
RPGR-207ENST00000476559 NOD1Q9Y239 953 aa12.07□□□□□ -0.48
RPGR-207ENST00000476559 GNASQ5JWF2 1037 aa12.06□□□□□ -0.48
RPGR-207ENST00000476559 TBC1D9Q6ZT07 1266 aa12.06□□□□□ -0.48
RPGR-207ENST00000476559 STK17AQ9UEE5 414 aa12.06□□□□□ -0.48
RPGR-207ENST00000476559 PCDHGA11Q9Y5H2 935 aa12.06□□□□□ -0.48
RPGR-207ENST00000476559 WDR44Q5JSH3 913 aa12.05□□□□□ -0.48
RPGR-207ENST00000476559 GTF2IP78347 998 aa12.04□□□□□ -0.48
RPGR-207ENST00000476559 DBN1Q16643 649 aa12.04□□□□□ -0.48
RPGR-207ENST00000476559 C4orf17Q53FE4 359 aa12.04□□□□□ -0.48
RPGR-207ENST00000476559 TRIM22Q8IYM9 498 aa12.04□□□□□ -0.48
RPGR-207ENST00000476559 GLMNQ92990 594 aa12.04□□□□□ -0.48
RPGR-207ENST00000476559 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
RPGR-207ENST00000476559 TMEM229AB2RXF0 380 aa12.03□□□□□ -0.48
RPGR-207ENST00000476559 LZTS3O60299 673 aaPredicted RBP12.03□□□□□ -0.48
RPGR-207ENST00000476559 PSME1Q06323 249 aa12.03□□□□□ -0.48
RPGR-207ENST00000476559 GPAMQ9HCL2 828 aa12.03□□□□□ -0.48
RPGR-207ENST00000476559 A6NJR5 290 aa12.02□□□□□ -0.49
RPGR-207ENST00000476559 GPR25O00155 361 aa12.02□□□□□ -0.49
RPGR-207ENST00000476559 F11P03951 625 aa12.02□□□□□ -0.49
RPGR-207ENST00000476559 PPARGC1BQ86YN6 1023 aaKnown RBP12.02□□□□□ -0.49
RPGR-207ENST00000476559 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
RPGR-207ENST00000476559 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
RPGR-207ENST00000476559 USP17L2Q6R6M4 530 aa12.01□□□□□ -0.49
RPGR-207ENST00000476559 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
RPGR-207ENST00000476559 RHBDD1Q8TEB9 315 aa12.01□□□□□ -0.49
RPGR-207ENST00000476559 H7C1W4 665 aa12□□□□□ -0.49
RPGR-207ENST00000476559 ATP9BO43861 1147 aa12□□□□□ -0.49
RPGR-207ENST00000476559 SMTNP53814 917 aa12□□□□□ -0.49
RPGR-207ENST00000476559 GTPBP3Q969Y2 492 aaKnown RBP12□□□□□ -0.49
RPGR-207ENST00000476559 A0A1B0GTH6 734 aa11.98□□□□□ -0.49
RPGR-207ENST00000476559 PLA2G4AP47712 749 aa11.98□□□□□ -0.49
RPGR-207ENST00000476559 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
RPGR-207ENST00000476559 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.98□□□□□ -0.49
RPGR-207ENST00000476559 GMCL1Q96IK5 515 aa11.98□□□□□ -0.49
RPGR-207ENST00000476559 CALR3Q96L12 384 aaKnown RBP11.98□□□□□ -0.49
RPGR-207ENST00000476559 GAS6Q14393 721 aa11.97□□□□□ -0.49
RPGR-207ENST00000476559 FOXR1Q6PIV2 292 aa11.97□□□□□ -0.49
RPGR-207ENST00000476559 NUCKS1Q9H1E3 243 aaKnown RBP11.97□□□□□ -0.49
RPGR-207ENST00000476559 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
RPGR-207ENST00000476559 FAM181BA6NEQ2 426 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 A6NJY4 79 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 MSX1P28360 303 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 TRIM50Q86XT4 487 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 SLC4A9Q96Q91 983 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 RUBCNLQ9H714 662 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 ZNF358Q9NW07 568 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 USP3Q9Y6I4 520 aa11.96□□□□□ -0.49
RPGR-207ENST00000476559 NIFKQ9BYG3 293 aaKnown RBP11.95□□□□□ -0.5
RPGR-207ENST00000476559 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
RPGR-207ENST00000476559 KIAA1024Q9UPX6 916 aa11.95□□□□□ -0.5
RPGR-207ENST00000476559 BACH1O14867 736 aa11.94□□□□□ -0.5
RPGR-207ENST00000476559 CLDN10P78369 228 aa11.94□□□□□ -0.5
RPGR-207ENST00000476559 TPCN2Q8NHX9 752 aa11.94□□□□□ -0.5
RPGR-207ENST00000476559 AIDAQ96BJ3 306 aa11.94□□□□□ -0.5
RPGR-207ENST00000476559 ZBTB7BO15156 539 aaPredicted RBP11.93□□□□□ -0.5
RPGR-207ENST00000476559 THBS1P07996 1170 aa11.93□□□□□ -0.5
RPGR-207ENST00000476559 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
RPGR-207ENST00000476559 MTFR1Q15390 333 aa11.93□□□□□ -0.5
RPGR-207ENST00000476559 PGBD3Q8N328 593 aa11.93□□□□□ -0.5
RPGR-207ENST00000476559 TRERF1Q96PN7 1200 aa11.93□□□□□ -0.5
RPGR-207ENST00000476559 ZNF777Q9ULD5 760 aaPredicted RBP11.93□□□□□ -0.5
RPGR-207ENST00000476559 CDK2AP1O14519 115 aa11.92□□□□□ -0.5
RPGR-207ENST00000476559 ATP1A2P50993 1020 aa11.92□□□□□ -0.5
RPGR-207ENST00000476559 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
RPGR-207ENST00000476559 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
RPGR-207ENST00000476559 DNAAF2Q9NVR5 837 aaKnown RBP11.92□□□□□ -0.5
RPGR-207ENST00000476559 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
RPGR-207ENST00000476559 IQSEC3Q9UPP2 1182 aaPredicted RBP11.92□□□□□ -0.5
RPGR-207ENST00000476559 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
RPGR-207ENST00000476559 ADAMTS2O95450 1211 aa11.91□□□□□ -0.5
RPGR-207ENST00000476559 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
RPGR-207ENST00000476559 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
RPGR-207ENST00000476559 SLURP2P0DP57 97 aa11.9□□□□□ -0.5
RPGR-207ENST00000476559 TNS4Q8IZW8 715 aa11.9□□□□□ -0.5
RPGR-207ENST00000476559 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
RPGR-207ENST00000476559 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.5
RPGR-207ENST00000476559 TBCELQ5QJ74 424 aa11.89□□□□□ -0.51
RPGR-207ENST00000476559 ZNF385CQ66K41 422 aaPredicted RBP11.89□□□□□ -0.51
RPGR-207ENST00000476559 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
RPGR-207ENST00000476559 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
RPGR-207ENST00000476559 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
RPGR-207ENST00000476559 SCHIP1Q9P0W5 487 aaPredicted RBP11.89□□□□□ -0.51
RPGR-207ENST00000476559 SRSF11Q05519 484 aaKnown RBP11.88□□□□□ -0.51
RPGR-207ENST00000476559 EFHC2Q5JST6 749 aa11.88□□□□□ -0.51
RPGR-207ENST00000476559 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
RPGR-207ENST00000476559 ATP4AP20648 1035 aa11.87□□□□□ -0.51
RPGR-207ENST00000476559 RASA1P20936 1047 aa11.87□□□□□ -0.51
RPGR-207ENST00000476559 EPHA4P54764 986 aa11.86□□□□□ -0.51
RPGR-207ENST00000476559 SLC9A9Q8IVB4 645 aa11.86□□□□□ -0.51
RPGR-207ENST00000476559 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
RPGR-207ENST00000476559 IGF1RP08069 1367 aa11.86□□□□□ -0.51
RPGR-207ENST00000476559 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
RPGR-207ENST00000476559 MX2P20592 715 aa11.85□□□□□ -0.51
RPGR-207ENST00000476559 UBAP2LQ14157 1087 aaKnown RBP11.85□□□□□ -0.51
RPGR-207ENST00000476559 NBPF1Q3BBV0 1214 aa11.85□□□□□ -0.51
RPGR-207ENST00000476559 ARSJQ5FYB0 599 aaPredicted RBP11.85□□□□□ -0.51
RPGR-207ENST00000476559 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms